FFCP PHASE1:Hg19::chr9:124328237..124328240,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr9:124328237..124328240,+ | |||
|id=chr9:124328237..124328240,+ | |||
|ontology_enrichment_celltype=CL:0000083!3.50e-08!4;CL:0000066!7.15e-08!254;CL:0000223!9.75e-08!59;CL:0002076!2.04e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:1001319;3.67e-23;1!CL:1000600;3.67e-23;1!CL:0000083;7.07e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.13e-23,1;CL:1000600,5.13e-23,1;CL:0000083,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.26e-08;3!UBERON:0003353;1.26e-08;3 | |||
|ontology_enrichment_disease=DOID:162!1.64e-37!235;DOID:14566!2.14e-37!239;DOID:0050687!2.01e-30!143;DOID:305!1.60e-25!106;DOID:0050686!1.07e-19!137;DOID:1749!5.17e-16!14;DOID:299!1.41e-11!25;DOID:170!4.60e-11!6;DOID:1793!3.50e-08!4;DOID:0060058!9.73e-08!10;DOID:3119!3.06e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.67e-23;1!DOID:3603;3.67e-23;1!DOID:4074;1.75e-12;2!DOID:4905;1.75e-12;2!DOID:3498;1.75e-12;2!DOID:1749;2.72e-07;14!DOID:1793;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,4.10e-23,1;DOID:3603,4.10e-23,1;DOID:4074,1.65e-12,2;DOID:4905,1.65e-12,2;DOID:3498,1.65e-12,2;DOID:305,1.84e-07,106;DOID:1749,2.95e-07,14;DOID:1793,6.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.11e-09!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.67e-23;1!UBERON:0001256;3.67e-23;1!UBERON:0001259;3.67e-23;1!UBERON:0001255;2.74e-12;2!UBERON:0001556;2.74e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.13e-23,1;UBERON:0001256,5.13e-23,1;UBERON:0001259,5.13e-23,1;UBERON:0001255,3.24e-12,2;UBERON:0001556,3.24e-12,2;UBERON:0000162,3.24e-07,14;UBERON:0001353,3.24e-07,14;UBERON:0000163,3.24e-07,14;UBERON:0006866,3.24e-07,14;UBERON:0000164,3.24e-07,14;UBERON:0000931,3.24e-07,14;UBERON:0004122,8.58e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0.369754010166788,0.154934401160603,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,2.29702882490251,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0.735120647943095,0.371606350251437,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.246169610922139,0,0.629078458031288,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.448788222048861,0.108647371922008,0,0,0.533034776018635,0,0,0,0,0,0,1.89753732724185,0.158936578980379,0.421996129056054,0,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0.182454789215666,2.73930466504926,0.728341138602278,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0.138674673013139,0.694238953340524,0.293977192243133,0.34823682632161,0,0,0,0,0,0,0,0,0.274083849293502,0.397429223405979,0,0,0.240476460754601,0,0.19980960958213,0.288180834308212,0.229073192331831,0,0.14405479798815,0,0,1.63085047288337,0.732219924186332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.138348634936231,0.874862855734746,0.454947352624943,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0.327609848846413,0,1.26787274015176,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.825788063434183,0,0.808679663052368,0,0,0.198916222116275,0,0,0,0.261906694481422,0.327543835020193,0.147856086217045,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0,0,1.65471377237555,0.222462803784138,0,0,0.280272163313789,0,0.431855182437243,0,0,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0,0,0.4582137370881,0,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.892769693028288,11.6455307666178,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0.109265571963696,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.672791175483681,0,0,0,0,0,0,0,1.13964576055364,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr9:124328237..124328240,+ | |||
}} | |||
Revision as of 03:08, 23 January 2014
| Short description: | p@chr9:124328237..124328240, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | No |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr9:124328237..124328240, + |
| Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bladder cell | 5.13e-23 | 1 |
| lower urinary tract cell | 5.13e-23 | 1 |
| epithelial cell of pancreas | 6.87e-07 | 4 |
| Ontology term | p-value | n |
|---|---|---|
| urinary bladder urothelium | 5.13e-23 | 1 |
| wall of urinary bladder | 5.13e-23 | 1 |
| mucosa of urinary bladder | 5.13e-23 | 1 |
| urinary bladder | 3.24e-12 | 2 |
| lower urinary tract | 3.24e-12 | 2 |
| cloaca | 3.24e-07 | 14 |
| anal region | 3.24e-07 | 14 |
| embryonic cloaca | 3.24e-07 | 14 |
| terminal part of digestive tract | 3.24e-07 | 14 |
| primitive urogenital sinus | 3.24e-07 | 14 |
| proctodeum | 3.24e-07 | 14 |
| genitourinary system | 8.58e-07 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| cystadenocarcinoma | 4.10e-23 | 1 |
| mucinous cystadenocarcinoma | 4.10e-23 | 1 |
| pancreas adenocarcinoma | 1.65e-12 | 2 |
| pancreatic carcinoma | 1.65e-12 | 2 |
| pancreatic ductal adenocarcinoma | 1.65e-12 | 2 |
| carcinoma | 1.84e-07 | 106 |
| squamous cell carcinoma | 2.95e-07 | 14 |
| pancreatic cancer | 6.87e-07 | 4 |
