FFCP PHASE1:Hg19::chr9:138466794..138466798,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000445997_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_1_at_ENST00000445997_5end | |||
|id=chr9:138466794..138466798,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.20e-49!3;CL:0000159!3.06e-34!2;CL:0000313!2.66e-18!1;CL:0000319!8.72e-18!1 | |||
|ontology_enrichment_celltype_v019=CL:0000313;6.62e-41;1!CL:0000159;3.11e-21;2!CL:0002541;1.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,6.62e-41,1;CL:0000159,3.11e-21,2;CL:0002541,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.21e-40;1!UBERON:0005795;7.51e-17;10!UBERON:0006215;1.83e-14;3!UBERON:0004872;6.04e-07;7 | |||
|ontology_enrichment_disease=DOID:2152!2.66e-18!1;DOID:3030!8.72e-18!1 | |||
|ontology_enrichment_disease_v019=DOID:2152;6.62e-41;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,6.62e-41,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.20e-49!3;UBERON:0000920!1.20e-49!3;UBERON:0003124!6.62e-38!7;UBERON:0005631!3.39e-19!14;UBERON:0000158!3.39e-19!14;UBERON:0004911!2.66e-18!1;UBERON:0006834!3.16e-18!1;UBERON:0001874!1.03e-17!1;UBERON:0000478!2.38e-11!24;UBERON:0004909!7.98e-10!2;UBERON:0005383!9.12e-07!3;UBERON:0005382!9.12e-07!3;UBERON:0002771!9.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;6.62e-41;1!UBERON:0006834;9.91e-41;1!UBERON:0004909;3.11e-21;2!UBERON:0003124;1.83e-14;3!UBERON:0000920;1.83e-14;3!UBERON:0001987;3.42e-11;4!UBERON:0000474;7.14e-09;37!UBERON:0002037;6.78e-08;6!UBERON:0000478;1.36e-07;24!UBERON:0003100;3.38e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,6.62e-41,1;UBERON:0006834,9.91e-41,1;UBERON:0003124,2.02e-23,7;UBERON:0004909,3.11e-21,2;UBERON:0000920,2.09e-14,3;UBERON:0005631,2.82e-12,14;UBERON:0000158,2.82e-12,14;UBERON:0001987,3.42e-11,4;UBERON:0004340,3.42e-11,4;UBERON:0003134,1.77e-10,37;UBERON:0000474,1.77e-10,37;UBERON:0003100,1.56e-09,41;UBERON:0000995,1.42e-08,21;UBERON:0003133,2.96e-08,48;UBERON:0005795,3.15e-08,22;UBERON:0003975,3.15e-08,22;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0000478,1.40e-07,24;UBERON:0004175,2.35e-07,25;UBERON:0005156,7.53e-07,59;UBERON:0000990,7.53e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.92833788528299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5670703278402,0,0,0,0 | |||
|short_description=p1@ENST00000445997 | |||
}} |
Revision as of 04:04, 23 January 2014
Short description: | p1@ENST00000445997 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000445997_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 0bp_to_ENST00000445997_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 6.62e-41 | 1 |
seromucus secreting cell | 3.11e-21 | 2 |
chorionic membrane mesenchymal stem cell | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 6.62e-41 | 1 |
uterus or analog | 9.91e-41 | 1 |
chorion | 2.02e-23 | 7 |
epithelium of gonad | 3.11e-21 | 2 |
egg chorion | 2.09e-14 | 3 |
extraembryonic membrane | 2.82e-12 | 14 |
membranous layer | 2.82e-12 | 14 |
placenta | 3.42e-11 | 4 |
allantois | 3.42e-11 | 4 |
female reproductive organ | 1.77e-10 | 37 |
female reproductive system | 1.77e-10 | 37 |
female organism | 1.56e-09 | 41 |
uterus | 1.42e-08 | 21 |
reproductive organ | 2.96e-08 | 48 |
embryonic uterus | 3.15e-08 | 22 |
internal female genitalia | 3.15e-08 | 22 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
extraembryonic structure | 1.40e-07 | 24 |
internal genitalia | 2.35e-07 | 25 |
reproductive structure | 7.53e-07 | 59 |
reproductive system | 7.53e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 6.62e-41 | 1 |