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{{UBERON
{{UBERON
|id=UBERON:0010227
|alt_id=
|name=future cardiac atrium
|namespace=
|def="Multi-tissue structure that is part of the heart tube and will become the cardiac atrium." [ZFA:0001718]
|xref=FMA:71005;;TAO:0002228;;ZFA:0001718
|is_a=UBERON:0005423
|synonym="presumptive atrium heart tube" EXACT [ZFA:0001718];;"primordial atrium" EXACT [FMA:71005];;"primordial cardiac atrium" EXACT [FMA:71005]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Multi-tissue structure that is part of the heart tube and will become the cardiac atrium." [ZFA:0001718]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0010227
|is_a=UBERON:0005423
|is_obsolete=
|located_in=
|located_in=
|name=future cardiac atrium
|namespace=
|obo_creation_date=
|part_of=UBERON:0004141
|part_of=UBERON:0004141
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="presumptive atrium heart tube" EXACT [ZFA:0001718];;"primordial atrium" EXACT [FMA:71005];;"primordial cardiac atrium" EXACT [FMA:71005]
|union_of=
|xref=FMA:71005;;TAO:0002228;;ZFA:0001718
}}
}}

Revision as of 11:49, 12 September 2014

Name:future cardiac atrium
Definition:"Multi-tissue structure that is part of the heart tube and will become the cardiac atrium." [ZFA:0001718]
Xrefs:
links:

FMA:71005
TAO:0002228

ZFA:0001718
Synonyms: "presumptive atrium heart tube" EXACT [ZFA:0001718]
"primordial atrium" EXACT [FMA:71005]
"primordial cardiac atrium" EXACT [FMA:71005]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0004141(heart tube)



Children

develops from:UBERON:0002081 (cardiac atrium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010227 (future cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_bbd974c0e7b7a1de121276cab29d12b1p@chr1:11905799..11905806, -
8.99e-131FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_bbd974c0e7b7a1de121276cab29d12b1p@chr1:11905799..11905806, -
8.99e-131FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_bbd974c0e7b7a1de121276cab29d12b1p9@NPPA
8.99e-131FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_bbd974c0e7b7a1de121276cab29d12b1p9@NPPA
9.38e-99FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_01a8e5839b64dcfa11080ac59fcf70c9p2@MYL7
9.38e-99FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_01a8e5839b64dcfa11080ac59fcf70c9p2@MYL7
9.38e-99FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_01a8e5839b64dcfa11080ac59fcf70c9p@chr1:11905830..11905839, -
9.38e-99FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_01a8e5839b64dcfa11080ac59fcf70c9p@chr1:11905830..11905839, -
1.55e-98FFCP PHASE2:Hg19::chr17:79385898..79385905,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr17:79385898..79385905, -
1.55e-98FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr12:4735761..4735787, -
1.55e-98FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_cfcb8bf5454dac63a3f466af25b46cf3p@chr15:86272097..86272099, +
1.55e-98FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_cfcb8bf5454dac63a3f466af25b46cf3p3@MYL7
1.55e-98FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_cfcb8bf5454dac63a3f466af25b46cf3p3@MYL7
1.55e-98FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr10:92678409..92678410, -
1.55e-98FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_cfcb8bf5454dac63a3f466af25b46cf3p@chr15:86272097..86272099, +
1.55e-98FFCP PHASE1:Hg19::chr1:43676416..43676417,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr1:43676416..43676417, -
1.55e-98FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr10:92678409..92678410, -
1.55e-98FFCP PHASE2:Hg19::chr1:43676416..43676417,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr1:43676416..43676417, -
1.55e-98FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr12:4735761..4735787, -
1.55e-98FFCP PHASE2:Hg19::chr1:11907474..11907481,-#_cfcb8bf5454dac63a3f466af25b46cf3p10@NPPA
1.55e-98FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr5:99390735..99390743, -
1.55e-98FFCP PHASE1:Hg19::chr17:79385898..79385905,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr17:79385898..79385905, -
1.55e-98FFCP PHASE1:Hg19::chr1:11907474..11907481,-#_cfcb8bf5454dac63a3f466af25b46cf3p10@NPPA
1.55e-98FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_cfcb8bf5454dac63a3f466af25b46cf3p@chr5:99390735..99390743, -
2.56e-98FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_46688e7aea89a02a7af44d75d18c265fp@chr7:44178491..44178498, -
2.56e-98FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_46688e7aea89a02a7af44d75d18c265fp@chr7:44178491..44178498, -
4.22e-98FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_7a1887d2a02dfac6b53e8762f02a341cp@chr12:114886577..114886589, -
4.22e-98FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_7a1887d2a02dfac6b53e8762f02a341cp@chr12:114886577..114886589, -
1.56e-79FFCP PHASE2:Hg19::chr10:92725775..92725780,+#_05274004e6e7c1f624eb0e9ecea3e53fp@chr10:92725775..92725780, +
1.56e-79FFCP PHASE1:Hg19::chr10:92725775..92725780,+#_05274004e6e7c1f624eb0e9ecea3e53fp@chr10:92725775..92725780, +
3.49e-79FFCP PHASE2:Hg19::chr15:86266279..86266292,+#_9d53473bbc88d37c3db7b046c9dc39a4p@chr15:86266279..86266292, +
3.49e-79FFCP PHASE1:Hg19::chr15:86266279..86266292,+#_9d53473bbc88d37c3db7b046c9dc39a4p@chr15:86266279..86266292, +
1.16e-78FFCP PHASE2:Hg19::chr2:179585314..179585321,-#_a0a8914d6803046f2cf91dcd34ac5ab0p@chr2:179585314..179585321, -
1.16e-78FFCP PHASE1:Hg19::chr2:179585314..179585321,-#_a0a8914d6803046f2cf91dcd34ac5ab0p@chr2:179585314..179585321, -
1.45e-66FFCP PHASE1:Hg19::chr12:114886372..114886399,-#_3612f6ec72b298ff447e2f2f13d5bd73p@chr12:114886372..114886399, -
1.45e-66FFCP PHASE2:Hg19::chr12:114886372..114886399,-#_3612f6ec72b298ff447e2f2f13d5bd73p@chr12:114886372..114886399, -
2.03e-66FFCP PHASE1:Hg19::chr13:111935498..111935509,+#_d9960259dd87c1cabf61b20495f3e2fap35@ARHGEF7
2.03e-66FFCP PHASE2:Hg19::chr13:111935498..111935509,+#_d9960259dd87c1cabf61b20495f3e2fap35@ARHGEF7
2.84e-66FFCP PHASE1:Hg19::chr14:23854202..23854211,-#_e5c1dc32f43883e8d22d46a4aa663499p@chr14:23854202..23854211, -
2.84e-66FFCP PHASE2:Hg19::chr14:23854202..23854211,-#_e5c1dc32f43883e8d22d46a4aa663499p@chr14:23854202..23854211, -
3.96e-66FFCP PHASE1:Hg19::chrX:78619044..78619053,-#_088edaa12a3f44fc98e079d6d0c3bec4p10@ITM2A
3.96e-66FFCP PHASE2:Hg19::chrX:78619044..78619053,-#_088edaa12a3f44fc98e079d6d0c3bec4p10@ITM2A
5.53e-66FFCP PHASE2:Hg19::chr2:179396981..179396986,-#_5a1bc518b39750d56991d53f752165d8p147@TTN
5.53e-66FFCP PHASE1:Hg19::chr2:179396981..179396986,-#_5a1bc518b39750d56991d53f752165d8p147@TTN
1.51e-57FFCP PHASE1:Hg19::chr1:78408547..78408558,+#_774b90b0002612f032d86ece8e3dea7fp@chr1:78408547..78408558, +
1.51e-57FFCP PHASE2:Hg19::chr1:78408547..78408558,+#_774b90b0002612f032d86ece8e3dea7fp@chr1:78408547..78408558, +
2.69e-57FFCP PHASE2:Hg19::chr1:11907940..11907947,-#_663f8c24fd962829f5eb84ff25a35523p2@NPPA
2.69e-57FFCP PHASE1:Hg19::chr1:11907940..11907947,-#_663f8c24fd962829f5eb84ff25a35523p2@NPPA
3.58e-57FFCP PHASE2:Hg19::chr1:11907441..11907453,-#_b279fb5013871828f9546a0b6c8f9828p3@NPPA
3.58e-57FFCP PHASE1:Hg19::chr1:11907441..11907453,-#_b279fb5013871828f9546a0b6c8f9828p3@NPPA
4.77e-57FFCP PHASE2:Hg19::chr2:179396338..179396348,-#_152426460e0e25b39135f1a0ded269a1p@chr2:179396338..179396348, -
4.77e-57FFCP PHASE1:Hg19::chr2:179396338..179396348,-#_152426460e0e25b39135f1a0ded269a1p@chr2:179396338..179396348, -
6.36e-57FFCP PHASE2:Hg19::chr1:12520398..12520406,+#_40fe63a9215436c5876cc498fdeccb11p@chr1:12520398..12520406, +
6.36e-57FFCP PHASE1:Hg19::chr1:12520398..12520406,+#_40fe63a9215436c5876cc498fdeccb11p@chr1:12520398..12520406, +
8.47e-57FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_169e32d282a158902d7d04d1b42f8420p@chrX:112324334..112324339, -
8.47e-57FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_169e32d282a158902d7d04d1b42f8420p@chrX:112324334..112324339, -
1.88e-50FFCP PHASE2:Hg19::chr4:95508126..95508142,+#_1515de4db1463ed0a5e19f56e4665f22p@chr4:95508126..95508142, +
1.88e-50FFCP PHASE1:Hg19::chr4:95508126..95508142,+#_1515de4db1463ed0a5e19f56e4665f22p@chr4:95508126..95508142, +
1.88e-50FFCP PHASE1:Hg19::chr2:179504505..179504514,-#_1515de4db1463ed0a5e19f56e4665f22p@chr2:179504505..179504514, -
1.88e-50FFCP PHASE2:Hg19::chr2:179504505..179504514,-#_1515de4db1463ed0a5e19f56e4665f22p@chr2:179504505..179504514, -
1.88e-50FFCP PHASE1:Hg19::chr1:163112604..163112616,-#_1515de4db1463ed0a5e19f56e4665f22p@chr1:163112604..163112616, -
1.88e-50FFCP PHASE2:Hg19::chr1:163112604..163112616,-#_1515de4db1463ed0a5e19f56e4665f22p@chr1:163112604..163112616, -
2.74e-50FFCP PHASE1:Hg19::chr15:26640258..26640266,+#_bcd95d72e3b2c4afbacce3229503d22fp4@ENST00000451579
2.74e-50FFCP PHASE2:Hg19::chr1:11906044..11906050,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11906044..11906050, -
2.74e-50FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr2:179656442..179656451, -
2.74e-50FFCP PHASE2:Hg19::chr15:26640258..26640266,+#_bcd95d72e3b2c4afbacce3229503d22fp4@ENST00000451579
2.74e-50FFCP PHASE1:Hg19::chr1:11906044..11906050,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11906044..11906050, -
2.74e-50FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_bcd95d72e3b2c4afbacce3229503d22fp@chr2:179656442..179656451, -
2.74e-50FFCP PHASE2:Hg19::chr1:11907415..11907418,-#_bcd95d72e3b2c4afbacce3229503d22fp15@NPPA
2.74e-50FFCP PHASE2:Hg19::chr12:94730118..94730123,-#_bcd95d72e3b2c4afbacce3229503d22fp13@CCDC41
2.74e-50FFCP PHASE1:Hg19::chr1:11907415..11907418,-#_bcd95d72e3b2c4afbacce3229503d22fp15@NPPA
2.74e-50FFCP PHASE1:Hg19::chr15:26640282..26640290,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000451579
2.74e-50FFCP PHASE2:Hg19::chr15:26640282..26640290,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000451579
2.74e-50FFCP PHASE2:Hg19::chr1:109849679..109849688,-#_bcd95d72e3b2c4afbacce3229503d22fp3@MYBPHL
2.74e-50FFCP PHASE2:Hg19::chr1:11907440..11907450,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907440..11907450, +
2.74e-50FFCP PHASE1:Hg19::chr1:109849679..109849688,-#_bcd95d72e3b2c4afbacce3229503d22fp3@MYBPHL
2.74e-50FFCP PHASE1:Hg19::chr1:11907440..11907450,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907440..11907450, +
2.74e-50FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_bcd95d72e3b2c4afbacce3229503d22fp16@ASNS
2.74e-50FFCP PHASE2:Hg19::chr1:11907318..11907327,-#_bcd95d72e3b2c4afbacce3229503d22fp7@NPPA
2.74e-50FFCP PHASE1:Hg19::chr1:11907318..11907327,-#_bcd95d72e3b2c4afbacce3229503d22fp7@NPPA
2.74e-50FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_bcd95d72e3b2c4afbacce3229503d22fp16@ASNS
2.74e-50FFCP PHASE1:Hg19::chr12:70004523..70004545,-#_bcd95d72e3b2c4afbacce3229503d22fp3@LRRC10
2.74e-50FFCP PHASE1:Hg19::chr4:8321842..8321846,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000509453
2.74e-50FFCP PHASE2:Hg19::chr1:11907408..11907415,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907408..11907415, +
2.74e-50FFCP PHASE2:Hg19::chr12:70004523..70004545,-#_bcd95d72e3b2c4afbacce3229503d22fp3@LRRC10
2.74e-50FFCP PHASE1:Hg19::chr1:11907408..11907415,+#_bcd95d72e3b2c4afbacce3229503d22fp@chr1:11907408..11907415, +
2.74e-50FFCP PHASE1:Hg19::chr12:94730118..94730123,-#_bcd95d72e3b2c4afbacce3229503d22fp13@CCDC41
2.74e-50FFCP PHASE2:Hg19::chr4:8321842..8321846,+#_bcd95d72e3b2c4afbacce3229503d22fp5@ENST00000509453
4.0e-50FFCP PHASE2:Hg19::chr20:44035965..44035976,+#_2ac5f156922a282cd40f9a86f2bdb927p30@DBNDD2
4.0e-50FFCP PHASE1:Hg19::chr20:44035965..44035976,+#_2ac5f156922a282cd40f9a86f2bdb927p30@DBNDD2
4.0e-50FFCP PHASE1:Hg19::chr14:23863442..23863452,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr14:23863442..23863452, -
4.0e-50FFCP PHASE2:Hg19::chr14:23863442..23863452,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr14:23863442..23863452, -
4.0e-50FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr5:123739302..123739319, -
4.0e-50FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_2ac5f156922a282cd40f9a86f2bdb927p@chr5:123739302..123739319, -
4.52e-50FFCP PHASE2:Hg19::chr14:23862118..23862122,-#_fae1a663f7495940b60af8f41707a908p18@MYH6
4.52e-50FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_fae1a663f7495940b60af8f41707a908p@chr6:70647888..70647891, +
4.52e-50FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_fae1a663f7495940b60af8f41707a908p@chr18:4003453..4003457, +
4.52e-50FFCP PHASE2:Hg19::chr8:142431453..142431493,+#_fae1a663f7495940b60af8f41707a908p@chr8:142431453..142431493, +
4.52e-50FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_fae1a663f7495940b60af8f41707a908p@chr6:104898467..104898469, -
4.52e-50FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_fae1a663f7495940b60af8f41707a908p@chr2:103287330..103287331, +

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