UBERON:0002081
From FANTOM5_SSTAR
Name: | cardiac atrium | ||
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Namespace: | FANTOM | ||
Definition: | "Cardiac chamber which consists of a wall that surrounds the cavity of an atrium.[FMA]" [FMA:FMA, Wikipedia:Heart_atrium] | ||
Xrefs: |
| ||
Synonyms: |
"atria" EXACT PLURAL [] "atrial tissue" RELATED [BTO:0000903] "atrium" EXACT [ZFA:0000471] "atrium of heart" EXACT [] "Cardiac atria" EXACT PLURAL [] "cardiac atria" EXACT PLURAL [] "heart atrium" EXACT [] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: | UBERON:FMA_7099-MA_0000073 | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0004151(cardiac chamber) |
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develops_from: | UBERON:0010227(future cardiac atrium) |
Children
is a: | UBERON:0002078 (right cardiac atrium),UBERON:0002079 (left cardiac atrium) |
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part of: | UBERON:0005946 (outflow tract of atrium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10079-102A7 (left atrium, adult, donor1)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002081 (cardiac atrium), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
8.99e-131 | FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_2b1dcff6e0a3a0c561c7bf35a52911da | p@chr1:11905799..11905806, - |
8.99e-131 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_2b1dcff6e0a3a0c561c7bf35a52911da | p9@NPPA |
8.99e-131 | FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_2b1dcff6e0a3a0c561c7bf35a52911da | p@chr1:11905799..11905806, - |
8.99e-131 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_2b1dcff6e0a3a0c561c7bf35a52911da | p9@NPPA |
9.38e-99 | FFCP PHASE2:Hg19::chr1:11905830..11905839,-#_32b2f753d39295e6ae32c2fa6bbc4ea4 | p@chr1:11905830..11905839, - |
9.38e-99 | FFCP PHASE2:Hg19::chr7:44179972..44179982,-#_32b2f753d39295e6ae32c2fa6bbc4ea4 | p2@MYL7 |
9.38e-99 | FFCP PHASE1:Hg19::chr7:44179972..44179982,-#_32b2f753d39295e6ae32c2fa6bbc4ea4 | p2@MYL7 |
9.38e-99 | FFCP PHASE1:Hg19::chr1:11905830..11905839,-#_32b2f753d39295e6ae32c2fa6bbc4ea4 | p@chr1:11905830..11905839, - |
1.55e-98 | FFCP PHASE1:Hg19::chr12:4735761..4735787,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr12:4735761..4735787, - |
1.55e-98 | FFCP PHASE1:Hg19::chr17:79385898..79385905,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr17:79385898..79385905, - |
1.55e-98 | FFCP PHASE2:Hg19::chr17:79385898..79385905,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr17:79385898..79385905, - |
1.55e-98 | FFCP PHASE2:Hg19::chr12:4735761..4735787,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr12:4735761..4735787, - |
1.55e-98 | FFCP PHASE2:Hg19::chr7:44180643..44180652,-#_f9c851a3d8da112289a57e14b3a86606 | p3@MYL7 |
1.55e-98 | FFCP PHASE2:Hg19::chr1:11907474..11907481,-#_f9c851a3d8da112289a57e14b3a86606 | p10@NPPA |
1.55e-98 | FFCP PHASE2:Hg19::chr1:43676416..43676417,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr1:43676416..43676417, - |
1.55e-98 | FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr10:92678409..92678410, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:43676416..43676417,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr1:43676416..43676417, - |
1.55e-98 | FFCP PHASE1:Hg19::chr7:44180643..44180652,-#_f9c851a3d8da112289a57e14b3a86606 | p3@MYL7 |
1.55e-98 | FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr5:99390735..99390743, - |
1.55e-98 | FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_f9c851a3d8da112289a57e14b3a86606 | p@chr15:86272097..86272099, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_f9c851a3d8da112289a57e14b3a86606 | p@chr15:86272097..86272099, + |
1.55e-98 | FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_f9c851a3d8da112289a57e14b3a86606 | -, p@chr10:92678409..92678410 |
1.55e-98 | FFCP PHASE1:Hg19::chr1:11907474..11907481,-#_f9c851a3d8da112289a57e14b3a86606 | p10@NPPA |
1.55e-98 | FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_f9c851a3d8da112289a57e14b3a86606 | p@chr5:99390735..99390743, - |
2.56e-98 | FFCP PHASE1:Hg19::chr7:44178491..44178498,-#_46aea807006a58a53df862d9da109837 | p@chr7:44178491..44178498, - |
2.56e-98 | FFCP PHASE2:Hg19::chr7:44178491..44178498,-#_46aea807006a58a53df862d9da109837 | p@chr7:44178491..44178498, - |
4.22e-98 | FFCP PHASE1:Hg19::chr12:114886577..114886589,-#_01636d5581514cbfcb7278186a3ed408 | p@chr12:114886577..114886589, - |
4.22e-98 | FFCP PHASE2:Hg19::chr12:114886577..114886589,-#_01636d5581514cbfcb7278186a3ed408 | -, p@chr12:114886577..114886589 |
1.56e-79 | FFCP PHASE1:Hg19::chr10:92725775..92725780,+#_2b64b51266786b39dbb24a542400a39d | p@chr10:92725775..92725780, + |
1.56e-79 | FFCP PHASE2:Hg19::chr10:92725775..92725780,+#_2b64b51266786b39dbb24a542400a39d | p@chr10:92725775..92725780, + |
3.49e-79 | FFCP PHASE2:Hg19::chr15:86266279..86266292,+#_81ca87df34999fe7325f42c965dae553 | p@chr15:86266279..86266292, + |
3.49e-79 | FFCP PHASE1:Hg19::chr15:86266279..86266292,+#_81ca87df34999fe7325f42c965dae553 | p@chr15:86266279..86266292, + |
1.16e-78 | FFCP PHASE2:Hg19::chr2:179585314..179585321,-#_668268131ff8e7b5ca7b1dbd77b46337 | p@chr2:179585314..179585321, - |
1.16e-78 | FFCP PHASE1:Hg19::chr2:179585314..179585321,-#_668268131ff8e7b5ca7b1dbd77b46337 | -, p@chr2:179585314..179585321 |
1.45e-66 | FFCP PHASE1:Hg19::chr12:114886372..114886399,-#_5c902b50cc464f798c98ac63b263dfa6 | p@chr12:114886372..114886399, - |
1.45e-66 | FFCP PHASE2:Hg19::chr12:114886372..114886399,-#_5c902b50cc464f798c98ac63b263dfa6 | p@chr12:114886372..114886399, - |
2.03e-66 | FFCP PHASE2:Hg19::chr13:111935498..111935509,+#_e706ac816e8054303479d3e4feec035f | p35@ARHGEF7 |
2.03e-66 | FFCP PHASE1:Hg19::chr13:111935498..111935509,+#_e706ac816e8054303479d3e4feec035f | p35@ARHGEF7 |
2.84e-66 | FFCP PHASE1:Hg19::chr14:23854202..23854211,-#_2045b0aa06c36bb040b7f93d3fcb8866 | p@chr14:23854202..23854211, - |
2.84e-66 | FFCP PHASE2:Hg19::chr14:23854202..23854211,-#_2045b0aa06c36bb040b7f93d3fcb8866 | p@chr14:23854202..23854211, - |
3.96e-66 | FFCP PHASE2:Hg19::chrX:78619044..78619053,-#_6ec739f918aece336edc93c58d1b3559 | p10@ITM2A |
3.96e-66 | FFCP PHASE1:Hg19::chrX:78619044..78619053,-#_6ec739f918aece336edc93c58d1b3559 | p10@ITM2A |
5.53e-66 | FFCP PHASE2:Hg19::chr2:179396981..179396986,-#_0e90eb70c585097d2962fb698407a717 | p147@TTN |
5.53e-66 | FFCP PHASE1:Hg19::chr2:179396981..179396986,-#_0e90eb70c585097d2962fb698407a717 | p147@TTN |
1.51e-57 | FFCP PHASE1:Hg19::chr1:78408547..78408558,+#_dcc10b83d1a1f10a70f4fe1de134c47b | p@chr1:78408547..78408558, + |
1.51e-57 | FFCP PHASE2:Hg19::chr1:78408547..78408558,+#_dcc10b83d1a1f10a70f4fe1de134c47b | p@chr1:78408547..78408558, + |
2.69e-57 | FFCP PHASE1:Hg19::chr1:11907940..11907947,-#_a5b841e03080c266dfa8ea7e0e8d9e8b | p2@NPPA |
2.69e-57 | FFCP PHASE2:Hg19::chr1:11907940..11907947,-#_a5b841e03080c266dfa8ea7e0e8d9e8b | p2@NPPA |
3.58e-57 | FFCP PHASE2:Hg19::chr1:11907441..11907453,-#_d8d46845d9d3e7cd34a39249349209a0 | p3@NPPA |
3.58e-57 | FFCP PHASE1:Hg19::chr1:11907441..11907453,-#_d8d46845d9d3e7cd34a39249349209a0 | p3@NPPA |
4.77e-57 | FFCP PHASE1:Hg19::chr2:179396338..179396348,-#_f73b13ee40cce04138598616c44794dc | p@chr2:179396338..179396348, - |
4.77e-57 | FFCP PHASE2:Hg19::chr2:179396338..179396348,-#_f73b13ee40cce04138598616c44794dc | p@chr2:179396338..179396348, - |
6.36e-57 | FFCP PHASE2:Hg19::chr1:12520398..12520406,+#_251e74ba36c0b54e220a36dd91fd4321 | p@chr1:12520398..12520406, + |
6.36e-57 | FFCP PHASE1:Hg19::chr1:12520398..12520406,+#_251e74ba36c0b54e220a36dd91fd4321 | p@chr1:12520398..12520406, + |
8.47e-57 | FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_ebb51c7f54edd87afd0950db5c701c6a | p@chrX:112324334..112324339, - |
8.47e-57 | FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_ebb51c7f54edd87afd0950db5c701c6a | p@chrX:112324334..112324339, - |
1.88e-50 | FFCP PHASE1:Hg19::chr4:95508126..95508142,+#_56f8e70c1b377f1854ac90fe635e779b | p@chr4:95508126..95508142, + |
1.88e-50 | FFCP PHASE1:Hg19::chr2:179504505..179504514,-#_56f8e70c1b377f1854ac90fe635e779b | p@chr2:179504505..179504514, - |
1.88e-50 | FFCP PHASE2:Hg19::chr1:163112604..163112616,-#_56f8e70c1b377f1854ac90fe635e779b | p@chr1:163112604..163112616, - |
1.88e-50 | FFCP PHASE2:Hg19::chr4:95508126..95508142,+#_56f8e70c1b377f1854ac90fe635e779b | p@chr4:95508126..95508142, + |
1.88e-50 | FFCP PHASE2:Hg19::chr2:179504505..179504514,-#_56f8e70c1b377f1854ac90fe635e779b | p@chr2:179504505..179504514, - |
1.88e-50 | FFCP PHASE1:Hg19::chr1:163112604..163112616,-#_56f8e70c1b377f1854ac90fe635e779b | p@chr1:163112604..163112616, - |
2.74e-50 | FFCP PHASE1:Hg19::chr4:8321842..8321846,+#_14b54e6df25b816253a74468f5ee1b03 | p5@ENST00000509453 |
2.74e-50 | FFCP PHASE2:Hg19::chr1:11907440..11907450,+#_14b54e6df25b816253a74468f5ee1b03 | p@chr1:11907440..11907450, + |
2.74e-50 | FFCP PHASE2:Hg19::chr15:26640282..26640290,+#_14b54e6df25b816253a74468f5ee1b03 | p5@ENST00000451579 |
2.74e-50 | FFCP PHASE1:Hg19::chr1:11907408..11907415,+#_14b54e6df25b816253a74468f5ee1b03 | p@chr1:11907408..11907415, + |
2.74e-50 | FFCP PHASE2:Hg19::chr4:8321842..8321846,+#_14b54e6df25b816253a74468f5ee1b03 | p5@ENST00000509453 |
2.74e-50 | FFCP PHASE2:Hg19::chr1:11907318..11907327,-#_14b54e6df25b816253a74468f5ee1b03 | p7@NPPA |
2.74e-50 | FFCP PHASE1:Hg19::chr1:11906044..11906050,-#_14b54e6df25b816253a74468f5ee1b03 | p@chr1:11906044..11906050, - |
2.74e-50 | FFCP PHASE1:Hg19::chr1:11907415..11907418,-#_14b54e6df25b816253a74468f5ee1b03 | p15@NPPA |
2.74e-50 | FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_14b54e6df25b816253a74468f5ee1b03 | p16@ASNS |
2.74e-50 | FFCP PHASE2:Hg19::chr12:70004523..70004545,-#_14b54e6df25b816253a74468f5ee1b03 | p3@LRRC10 |
2.74e-50 | FFCP PHASE1:Hg19::chr12:70004523..70004545,-#_14b54e6df25b816253a74468f5ee1b03 | p3@LRRC10 |
2.74e-50 | FFCP PHASE2:Hg19::chr1:109849679..109849688,-#_14b54e6df25b816253a74468f5ee1b03 | p3@MYBPHL |
2.74e-50 | FFCP PHASE2:Hg19::chr12:94730118..94730123,-#_14b54e6df25b816253a74468f5ee1b03 | p13@CCDC41 |
2.74e-50 | FFCP PHASE1:Hg19::chr1:109849679..109849688,-#_14b54e6df25b816253a74468f5ee1b03 | p3@MYBPHL |
2.74e-50 | FFCP PHASE1:Hg19::chr15:26640258..26640266,+#_14b54e6df25b816253a74468f5ee1b03 | p4@ENST00000451579 |
2.74e-50 | FFCP PHASE1:Hg19::chr1:11907440..11907450,+#_14b54e6df25b816253a74468f5ee1b03 | p@chr1:11907440..11907450, + |
2.74e-50 | FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_14b54e6df25b816253a74468f5ee1b03 | p@chr2:179656442..179656451, - |
2.74e-50 | FFCP PHASE2:Hg19::chr1:11907408..11907415,+#_14b54e6df25b816253a74468f5ee1b03 | p@chr1:11907408..11907415, + |
2.74e-50 | FFCP PHASE1:Hg19::chr1:11907318..11907327,-#_14b54e6df25b816253a74468f5ee1b03 | p7@NPPA |
2.74e-50 | FFCP PHASE1:Hg19::chr12:94730118..94730123,-#_14b54e6df25b816253a74468f5ee1b03 | p13@CCDC41 |
2.74e-50 | FFCP PHASE1:Hg19::chr15:26640282..26640290,+#_14b54e6df25b816253a74468f5ee1b03 | p5@ENST00000451579 |
2.74e-50 | FFCP PHASE2:Hg19::chr1:11906044..11906050,-#_14b54e6df25b816253a74468f5ee1b03 | p@chr1:11906044..11906050, - |
2.74e-50 | FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_14b54e6df25b816253a74468f5ee1b03 | p@chr2:179656442..179656451, - |
2.74e-50 | FFCP PHASE2:Hg19::chr15:26640258..26640266,+#_14b54e6df25b816253a74468f5ee1b03 | p4@ENST00000451579 |
2.74e-50 | FFCP PHASE2:Hg19::chr1:11907415..11907418,-#_14b54e6df25b816253a74468f5ee1b03 | p15@NPPA |
2.74e-50 | FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_14b54e6df25b816253a74468f5ee1b03 | p16@ASNS |
4.0e-50 | FFCP PHASE2:Hg19::chr20:44035965..44035976,+#_d2d137ea6c35cf2b408c24c7dc3f992a | p30@DBNDD2 |
4.0e-50 | FFCP PHASE2:Hg19::chr14:23863442..23863452,-#_d2d137ea6c35cf2b408c24c7dc3f992a | p@chr14:23863442..23863452, - |
4.0e-50 | FFCP PHASE2:Hg19::chr5:123739302..123739319,-#_d2d137ea6c35cf2b408c24c7dc3f992a | p@chr5:123739302..123739319, - |
4.0e-50 | FFCP PHASE1:Hg19::chr5:123739302..123739319,-#_d2d137ea6c35cf2b408c24c7dc3f992a | p@chr5:123739302..123739319, - |
4.0e-50 | FFCP PHASE1:Hg19::chr20:44035965..44035976,+#_d2d137ea6c35cf2b408c24c7dc3f992a | p30@DBNDD2 |
4.0e-50 | FFCP PHASE1:Hg19::chr14:23863442..23863452,-#_d2d137ea6c35cf2b408c24c7dc3f992a | p@chr14:23863442..23863452, - |
4.52e-50 | FFCP PHASE1:Hg19::chr18:28807557..28807562,-#_83f469aaacaa8c3bf98c43e6be636518 | p@chr18:28807557..28807562, - |
4.52e-50 | FFCP PHASE1:Hg19::chr8:142431453..142431493,+#_83f469aaacaa8c3bf98c43e6be636518 | p@chr8:142431453..142431493, + |
4.52e-50 | FFCP PHASE2:Hg19::chr11:45274102..45274110,-#_83f469aaacaa8c3bf98c43e6be636518 | p@chr11:45274102..45274110, - |
4.52e-50 | FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_83f469aaacaa8c3bf98c43e6be636518 | p@chr2:103287330..103287331, + |
4.52e-50 | FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_83f469aaacaa8c3bf98c43e6be636518 | p@chr6:104898467..104898469, - |
4.52e-50 | FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_83f469aaacaa8c3bf98c43e6be636518 | p9@RAD51B |
Property "Property value" (as page type) with input value "UBPROP:0000001 "One of four heart chambers.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "One of two chambers of the heart which receive blood from the veins and forces it by muscular contration to the ventricle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.