CL:0002566: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=dark melanocyte | |name=dark melanocyte | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-01T05:57:11Z | |obo_creation_date=2011-03-01T05:57:11Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:44, 12 September 2014
| Name: | dark melanocyte |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A melanocyte that appears darker due to content or amount of melanin granules." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-01T05:57:11Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000148(melanocyte) |
|---|
Children
| derives from: | FF:0000089 (human dark melanocyte sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11502-119F8 (Melanocyte - dark, donor1)
- 11581-120F6
- 11582-120F7 (Melanocyte - dark, donor2)
- 11663-122F7 (Melanocyte - dark, donor3)
Mouse (Mus musculus)
- 11502-119F8 (Melanocyte - dark, donor1)
- 11581-120F6
- 11582-120F7 (Melanocyte - dark, donor2)
- 11663-122F7 (Melanocyte - dark, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002566 (dark melanocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr9:15852076..15852082,+#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr9:15852076..15852082, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr14:34638804..34638809,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr14:34638804..34638809, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr19:34566717..34566729,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr19:34566717..34566729, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr16:84074687..84074692,+#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr16:84074687..84074692, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:42686326..42686331,+#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr15:42686326..42686331, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:2657383..2657390,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr7:2657383..2657390, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr19:34566680..34566687,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr19:34566680..34566687, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr9:15852076..15852082,+#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr9:15852076..15852082, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr16:84074687..84074692,+#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr16:84074687..84074692, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:42686326..42686331,+#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr15:42686326..42686331, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:2657383..2657390,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr7:2657383..2657390, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr19:34566717..34566729,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr19:34566717..34566729, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr19:34566680..34566687,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr19:34566680..34566687, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr14:34638804..34638809,-#_b3bbeaec4b9f2b4a8cc31f3a2e266014 | p@chr14:34638804..34638809, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:4613693..4613698,-#_109c50d1326b84246b74bab6fa014e5f | p@chr6:4613693..4613698, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:12531762..12531779,+#_109c50d1326b84246b74bab6fa014e5f | p@chr2:12531762..12531779, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr16:84074748..84074755,+#_109c50d1326b84246b74bab6fa014e5f | p@chr16:84074748..84074755, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:29605917..29605922,+#_109c50d1326b84246b74bab6fa014e5f | p6@ENST00000517491 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:55562451..55562456,-#_109c50d1326b84246b74bab6fa014e5f | p15@RAB27A |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:9251842..9251865,+#_109c50d1326b84246b74bab6fa014e5f | p@chr6:9251842..9251865, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:12531762..12531779,+#_109c50d1326b84246b74bab6fa014e5f | p@chr2:12531762..12531779, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr16:84076377..84076384,-#_109c50d1326b84246b74bab6fa014e5f | p@chr16:84076377..84076384, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:207083143..207083146,-#_109c50d1326b84246b74bab6fa014e5f | p16@FAIM3 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr16:84074748..84074755,+#_109c50d1326b84246b74bab6fa014e5f | p@chr16:84074748..84074755, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:29605917..29605922,+#_109c50d1326b84246b74bab6fa014e5f | p6@ENST00000517491 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:55562451..55562456,-#_109c50d1326b84246b74bab6fa014e5f | p15@RAB27A |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:4613693..4613698,-#_109c50d1326b84246b74bab6fa014e5f | p@chr6:4613693..4613698, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr16:84076377..84076384,-#_109c50d1326b84246b74bab6fa014e5f | p@chr16:84076377..84076384, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:207083143..207083146,-#_109c50d1326b84246b74bab6fa014e5f | p16@FAIM3 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:9251842..9251865,+#_109c50d1326b84246b74bab6fa014e5f | p@chr6:9251842..9251865, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr15:56649336..56649342,+#_ce603814f978903a84c1594eeba3c567 | p@chr15:56649336..56649342, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:27334243..27334244,+#_ce603814f978903a84c1594eeba3c567 | p@chr17:27334243..27334244, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr16:69176140..69176147,+#_ce603814f978903a84c1594eeba3c567 | p@chr16:69176140..69176147, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:79215652..79215659,+#_ce603814f978903a84c1594eeba3c567 | p@chr1:79215652..79215659, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr15:56649336..56649342,+#_ce603814f978903a84c1594eeba3c567 | p@chr15:56649336..56649342, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:27334243..27334244,+#_ce603814f978903a84c1594eeba3c567 | p@chr17:27334243..27334244, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr16:69176140..69176147,+#_ce603814f978903a84c1594eeba3c567 | p@chr16:69176140..69176147, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr20:61298826..61298834,+#_ce603814f978903a84c1594eeba3c567 | p13@SLCO4A1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:79215652..79215659,+#_ce603814f978903a84c1594eeba3c567 | p@chr1:79215652..79215659, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:61112998..61113003,+#_ce603814f978903a84c1594eeba3c567 | p15@DAK |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:61112998..61113003,+#_ce603814f978903a84c1594eeba3c567 | p15@DAK |
| 2.55e-98 | FFCP PHASE1:Hg19::chr20:61298826..61298834,+#_ce603814f978903a84c1594eeba3c567 | p13@SLCO4A1 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr16:68678900..68678907,+#_5a2c7b63486bae675c6d6bee20e0e58d | p11@CDH3 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr14:34638833..34638843,-#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr14:34638833..34638843, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr14:34638833..34638843,-#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr14:34638833..34638843, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:76559872..76559889,+#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr1:76559872..76559889, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr10:93335091..93335099,-#_5a2c7b63486bae675c6d6bee20e0e58d | p6@BC044257 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr10:4046629..4046639,+#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr10:4046629..4046639, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr10:93335091..93335099,-#_5a2c7b63486bae675c6d6bee20e0e58d | p6@BC044257 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr9:12711574..12711585,+#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr9:12711574..12711585, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr10:4046629..4046639,+#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr10:4046629..4046639, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr16:68678900..68678907,+#_5a2c7b63486bae675c6d6bee20e0e58d | p11@CDH3 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr1:1497417..1497420,-#_5a2c7b63486bae675c6d6bee20e0e58d | p5@AK129493 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:76559872..76559889,+#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr1:76559872..76559889, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr9:12711574..12711585,+#_5a2c7b63486bae675c6d6bee20e0e58d | p@chr9:12711574..12711585, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr1:1497417..1497420,-#_5a2c7b63486bae675c6d6bee20e0e58d | p5@AK129493 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:106240041..106240047,-#_0f86e6e104874ef9ccaff27f8d738535 | p1@ENST00000447860 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr9:12711878..12711885,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr9:12711878..12711885, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chrX:133340200..133340206,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chrX:133340200..133340206, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr14:93559337..93559385,-#_0f86e6e104874ef9ccaff27f8d738535 | p@chr14:93559337..93559385, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:106240041..106240047,-#_0f86e6e104874ef9ccaff27f8d738535 | p1@ENST00000447860 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:12712159..12712169,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr9:12712159..12712169, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:72870195..72870205,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr8:72870195..72870205, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:107338356..107338367,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr7:107338356..107338367, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr9:103191797..103191807,+#_0f86e6e104874ef9ccaff27f8d738535 | p22@C9orf30 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:166702828..166702850,-#_0f86e6e104874ef9ccaff27f8d738535 | p4@ENST00000428888 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:67872703..67872710,-#_0f86e6e104874ef9ccaff27f8d738535 | p@chr18:67872703..67872710, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chrX:133340200..133340206,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chrX:133340200..133340206, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr21:38568227..38568233,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr21:38568227..38568233, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:67872552..67872584,-#_0f86e6e104874ef9ccaff27f8d738535 | p@chr18:67872552..67872584, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr9:12712159..12712169,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr9:12712159..12712169, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:72870195..72870205,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr8:72870195..72870205, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:37594367..37594376,+#_0f86e6e104874ef9ccaff27f8d738535 | p12@QPCT |
| 2.39e-66 | FFCP PHASE2:Hg19::chr16:27771451..27771455,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr16:27771451..27771455, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr20:55091968..55091976,+#_0f86e6e104874ef9ccaff27f8d738535 | p6@FAM209A |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:12711878..12711885,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr9:12711878..12711885, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:103191797..103191807,+#_0f86e6e104874ef9ccaff27f8d738535 | p22@C9orf30 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr14:93559337..93559385,-#_0f86e6e104874ef9ccaff27f8d738535 | p@chr14:93559337..93559385, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr21:38568227..38568233,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr21:38568227..38568233, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:67872552..67872584,-#_0f86e6e104874ef9ccaff27f8d738535 | p@chr18:67872552..67872584, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:37594367..37594376,+#_0f86e6e104874ef9ccaff27f8d738535 | p12@QPCT |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:107338356..107338367,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr7:107338356..107338367, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:166702828..166702850,-#_0f86e6e104874ef9ccaff27f8d738535 | p4@ENST00000428888 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:67872703..67872710,-#_0f86e6e104874ef9ccaff27f8d738535 | p@chr18:67872703..67872710, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr16:27771451..27771455,+#_0f86e6e104874ef9ccaff27f8d738535 | p@chr16:27771451..27771455, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:55091968..55091976,+#_0f86e6e104874ef9ccaff27f8d738535 | p6@FAM209A |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:103433284..103433289,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr13:103433284..103433289, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr18:67872642..67872645,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr18:67872642..67872645, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:69987438..69987455,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr3:69987438..69987455, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr5:156015602..156015609,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr5:156015602..156015609, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr19:3557773..3557778,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p13@MFSD12 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:12668962..12668969,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p2@ENST00000534827 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr9:12704281..12704285,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr9:12704281..12704285, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr7:104398152..104398162,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p1@ENST00000433514 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:62438700..62438702,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p28@ASPH |
| 4.66e-66 | FFCP PHASE2:Hg19::chr22:26899907..26899914,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr22:26899907..26899914, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:69987438..69987455,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr3:69987438..69987455, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr5:156015602..156015609,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr5:156015602..156015609, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr9:12704281..12704285,+#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr9:12704281..12704285, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr18:67872642..67872645,-#_c2ba42fe4f8c555fd96b8d9259a527a9 | p@chr18:67872642..67872645, - |
