CL:1000428: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=stem cell of epidermis | |name=stem cell of epidermis | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001003 | |part_of=UBERON:0001003 | ||
Latest revision as of 16:46, 12 September 2014
| Name: | stem cell of epidermis | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A somatic stem cell that is part of the epidermis." [GOC:tfm] | ||
| Xrefs: |
| ||
| Synonyms: | "epidermal stem cell" EXACT [FMA:70541] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000723(somatic stem cell) |
|---|---|
| part_of: | UBERON:0001003(skin epidermis) |
Children
| derives from: | FF:0000071 (human hair follicle dermal papilla cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
- 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
- 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)
Mouse (Mus musculus)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
- 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
- 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:1000428 (stem cell of epidermis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_19bfb3ccb07ee985d324d92de2037a1f | p@chr7:127963997..127964004, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_19bfb3ccb07ee985d324d92de2037a1f | p@chr7:127963997..127964004, - |
| 4.68e-66 | FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_e74a8dd416247212b9159c41463dc576 | p@chr16:85617034..85617043, - |
| 4.68e-66 | FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_e74a8dd416247212b9159c41463dc576 | p@chr16:85617034..85617043, - |
| 6.53e-66 | FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_28b8c763cb83dd4a5bbf314ea62e8a76 | p@chr5:174252850..174252859, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_28b8c763cb83dd4a5bbf314ea62e8a76 | p@chr5:174252850..174252859, + |
| 1.33e-60 | FFCP PHASE1:Hg19::chr20:940152..940156,-#_00a2661e69455ed4d3b68d9d6f68fa90 | p@chr20:940152..940156, - |
| 1.33e-60 | FFCP PHASE2:Hg19::chr20:940152..940156,-#_00a2661e69455ed4d3b68d9d6f68fa90 | p@chr20:940152..940156, - |
| 9.99e-60 | FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_152cb757b848ff36fad73ec889d62646 | p10@TBX15 |
| 9.99e-60 | FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_152cb757b848ff36fad73ec889d62646 | p10@TBX15 |
| 1.83e-59 | FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_928f6bb12df57be057eebc404cd6963d | p@chr17:73682761..73682766, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_928f6bb12df57be057eebc404cd6963d | p@chr17:73682761..73682766, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_87044b52532a436c41217eba26f526c0 | p@chr12:2163623..2163634, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_87044b52532a436c41217eba26f526c0 | p@chr12:5198401..5198415, + |
| 2.87e-53 | FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_87044b52532a436c41217eba26f526c0 | p@chr12:5198401..5198415, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_87044b52532a436c41217eba26f526c0 | p@chr12:2163623..2163634, + |
| 1.22e-44 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_f924ee9e677dbaa911ee983266a110cf | p@chr10:15760985..15760992, - |
| 1.22e-44 | FFCP PHASE2:Hg19::chr16:85617044..85617059,-#_f924ee9e677dbaa911ee983266a110cf | p@chr16:85617044..85617059, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_f924ee9e677dbaa911ee983266a110cf | p@chr10:15760985..15760992, - |
| 1.22e-44 | FFCP PHASE1:Hg19::chr16:85617044..85617059,-#_f924ee9e677dbaa911ee983266a110cf | p@chr16:85617044..85617059, - |
| 1.01e-38 | FFCP PHASE1:Hg19::chr15:39534820..39534834,+#_9b7c74bdfd4a38a5d36e0bc9587d65ec | p@chr15:39534820..39534834, + |
| 1.01e-38 | FFCP PHASE2:Hg19::chr15:39534820..39534834,+#_9b7c74bdfd4a38a5d36e0bc9587d65ec | p@chr15:39534820..39534834, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr3:147109858..147109861,+#_dd5570816af5c9e29947464964695785 | p@chr3:147109858..147109861, + |
| 2.18e-38 | FFCP PHASE2:Hg19::chr3:147109858..147109861,+#_dd5570816af5c9e29947464964695785 | p@chr3:147109858..147109861, + |
| 2.64e-38 | FFCP PHASE1:Hg19::chr3:147128048..147128057,+#_57623cad9cc5266ce3c528652026d073 | p4@AB464362 |
| 2.64e-38 | FFCP PHASE2:Hg19::chr3:147128048..147128057,+#_57623cad9cc5266ce3c528652026d073 | p4@AB464362 |
| 2.7e-38 | FFCP PHASE1:Hg19::chr3:147112699..147112713,-#_d39b4cd129888fb419f018ee7760e8bb | p@chr3:147112699..147112713, - |
| 2.7e-38 | FFCP PHASE2:Hg19::chr3:147112699..147112713,-#_d39b4cd129888fb419f018ee7760e8bb | p@chr3:147112699..147112713, - |
| 4.48e-38 | FFCP PHASE2:Hg19::chr21:47405885..47405896,+#_9d4fc6d6216ea14d3a15d076aa294fdd | p@chr21:47405885..47405896, + |
| 4.48e-38 | FFCP PHASE1:Hg19::chr21:47405885..47405896,+#_9d4fc6d6216ea14d3a15d076aa294fdd | p@chr21:47405885..47405896, + |
| 8.41e-38 | FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_cb3602ad2ee95829444102b2b90602c5 | p@chr15:80800274..80800278, - |
| 8.41e-38 | FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_cb3602ad2ee95829444102b2b90602c5 | p@chr15:80800274..80800278, - |
| 5.51e-34 | FFCP PHASE2:Hg19::chr17:38174999..38175001,+#_a0806491c974a1a445264d60bb1d88b9 | p8@CASC3 |
| 5.51e-34 | FFCP PHASE2:Hg19::chr2:235904638..235904641,-#_a0806491c974a1a445264d60bb1d88b9 | p@chr2:235904638..235904641, - |
| 5.51e-34 | FFCP PHASE1:Hg19::chr2:235904638..235904641,-#_a0806491c974a1a445264d60bb1d88b9 | p@chr2:235904638..235904641, - |
| 5.51e-34 | FFCP PHASE1:Hg19::chr17:38174999..38175001,+#_a0806491c974a1a445264d60bb1d88b9 | p8@CASC3 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr11:6341147..6341156,-#_9564332c1daf1f3e5fc6e2008dffedad | p14@PRKCDBP |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:168333065..168333071,+#_9564332c1daf1f3e5fc6e2008dffedad | p33@MLLT4 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr7:93928562..93928567,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr7:93928562..93928567, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr10:90750010..90750015,+#_9564332c1daf1f3e5fc6e2008dffedad | p15@FAS |
| 5.96e-34 | FFCP PHASE1:Hg19::chr7:93928562..93928567,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr7:93928562..93928567, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr13:50654430..50654438,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr13:50654430..50654438, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr13:50654430..50654438,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr13:50654430..50654438, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr11:118789349..118789355,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr11:118789349..118789355, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr3:124485247..124485272,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr3:124485247..124485272, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr9:35748867..35748868,-#_9564332c1daf1f3e5fc6e2008dffedad | p13@GBA2 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr13:114108115..114108122,-#_9564332c1daf1f3e5fc6e2008dffedad | p13@ADPRHL1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr9:35748867..35748868,-#_9564332c1daf1f3e5fc6e2008dffedad | p13@GBA2 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr2:30864461..30864472,+#_9564332c1daf1f3e5fc6e2008dffedad | p11@LCLAT1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr13:30075330..30075333,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr13:30075330..30075333, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr3:124485247..124485272,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr3:124485247..124485272, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr13:114108115..114108122,-#_9564332c1daf1f3e5fc6e2008dffedad | p13@ADPRHL1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr2:30864461..30864472,+#_9564332c1daf1f3e5fc6e2008dffedad | p11@LCLAT1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr11:118789349..118789355,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr11:118789349..118789355, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr12:69754026..69754035,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr12:69754026..69754035, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr5:53358788..53358795,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr5:53358788..53358795, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr4:151246994..151247003,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr4:151246994..151247003, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr13:30075330..30075333,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr13:30075330..30075333, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr8:23210765..23210805,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr8:23210765..23210805, + |
| 5.96e-34 | FFCP PHASE1:Hg19::chr4:151246994..151247003,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr4:151246994..151247003, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr12:69754026..69754035,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr12:69754026..69754035, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr13:45914842..45914847,-#_9564332c1daf1f3e5fc6e2008dffedad | p14@TPT1 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr9:3330877..3330914,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr9:3330877..3330914, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr11:6341147..6341156,-#_9564332c1daf1f3e5fc6e2008dffedad | p14@PRKCDBP |
| 5.96e-34 | FFCP PHASE2:Hg19::chr5:53358788..53358795,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr5:53358788..53358795, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr9:3330877..3330914,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr9:3330877..3330914, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr15:40773537..40773544,-#_9564332c1daf1f3e5fc6e2008dffedad | p1@ENST00000489027 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr20:55403726..55403730,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr20:55403726..55403730, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr8:23210765..23210805,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr8:23210765..23210805, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr10:90750010..90750015,+#_9564332c1daf1f3e5fc6e2008dffedad | p15@FAS |
| 5.96e-34 | FFCP PHASE1:Hg19::chr20:55403726..55403730,+#_9564332c1daf1f3e5fc6e2008dffedad | p@chr20:55403726..55403730, + |
| 5.96e-34 | FFCP PHASE2:Hg19::chr15:40773537..40773544,-#_9564332c1daf1f3e5fc6e2008dffedad | p1@ENST00000489027 |
| 5.96e-34 | FFCP PHASE2:Hg19::chr6:26305727..26305730,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr6:26305727..26305730, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr13:45914842..45914847,-#_9564332c1daf1f3e5fc6e2008dffedad | p14@TPT1 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:26305727..26305730,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr6:26305727..26305730, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr5:150398982..150399013,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr5:150398982..150399013, - |
| 5.96e-34 | FFCP PHASE1:Hg19::chr5:150398982..150399013,-#_9564332c1daf1f3e5fc6e2008dffedad | p@chr5:150398982..150399013, - |
| 5.96e-34 | FFCP PHASE2:Hg19::chr9:88939319..88939326,-#_9564332c1daf1f3e5fc6e2008dffedad | p25@ZCCHC6 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr9:88939319..88939326,-#_9564332c1daf1f3e5fc6e2008dffedad | p25@ZCCHC6 |
| 5.96e-34 | FFCP PHASE1:Hg19::chr6:168333065..168333071,+#_9564332c1daf1f3e5fc6e2008dffedad | p33@MLLT4 |
| 6.51e-34 | FFCP PHASE2:Hg19::chr15:90344831..90344839,-#_2ad41b860ca980214a2769b02ea6f601 | p@chr15:90344831..90344839, - |
| 6.51e-34 | FFCP PHASE1:Hg19::chr15:90344831..90344839,-#_2ad41b860ca980214a2769b02ea6f601 | p@chr15:90344831..90344839, - |
| 7.56e-34 | FFCP PHASE1:Hg19::chr3:147114993..147115013,-#_490b6bb3014859e9d415ec9149d18e3e | p5@ZIC4 |
| 7.56e-34 | FFCP PHASE2:Hg19::chr3:147114993..147115013,-#_490b6bb3014859e9d415ec9149d18e3e | p5@ZIC4 |
| 7.56e-34 | FFCP PHASE2:Hg19::chr7:1705417..1705429,+#_490b6bb3014859e9d415ec9149d18e3e | p@chr7:1705417..1705429, + |
| 7.56e-34 | FFCP PHASE1:Hg19::chr7:1705417..1705429,+#_490b6bb3014859e9d415ec9149d18e3e | p@chr7:1705417..1705429, + |
| 7.7e-34 | FFCP PHASE1:Hg19::chr3:147128031..147128038,+#_4837d887fabd05f1d8264da57f8d5237 | p7@AB464362 |
| 7.7e-34 | FFCP PHASE2:Hg19::chr3:147128031..147128038,+#_4837d887fabd05f1d8264da57f8d5237 | p7@AB464362 |
| 8.46e-34 | FFCP PHASE1:Hg19::chr3:134046037..134046050,+#_4ff268bd93421b781ee0249858706c99 | p@chr3:134046037..134046050, + |
| 8.46e-34 | FFCP PHASE2:Hg19::chr3:134046037..134046050,+#_4ff268bd93421b781ee0249858706c99 | p@chr3:134046037..134046050, + |
| 9.1e-34 | FFCP PHASE1:Hg19::chr15:33018927..33018930,+#_f4118ce487bb322e0da1449fdf252859 | p@chr15:33018927..33018930, + |
| 9.1e-34 | FFCP PHASE2:Hg19::chr15:33018927..33018930,+#_f4118ce487bb322e0da1449fdf252859 | p@chr15:33018927..33018930, + |
| 9.1e-34 | FFCP PHASE1:Hg19::chr17:17418548..17418557,-#_f4118ce487bb322e0da1449fdf252859 | p@chr17:17418548..17418557, - |
| 9.1e-34 | FFCP PHASE2:Hg19::chr17:17418548..17418557,-#_f4118ce487bb322e0da1449fdf252859 | p@chr17:17418548..17418557, - |
| 1.32e-33 | FFCP PHASE2:Hg19::chr7:140341251..140341265,-#_b0f50b36ed6619777696b6221bf9ce1b | p3@DENND2A |
| 1.32e-33 | FFCP PHASE1:Hg19::chr7:140341251..140341265,-#_b0f50b36ed6619777696b6221bf9ce1b | p3@DENND2A |
| 2.07e-33 | FFCP PHASE2:Hg19::chr4:107237244..107237257,+#_b0d2ac5adc5810a21ce8f23ed69b916f | p8@AIMP1 |
| 2.07e-33 | FFCP PHASE1:Hg19::chr4:107237244..107237257,+#_b0d2ac5adc5810a21ce8f23ed69b916f | p8@AIMP1 |
| 4.17e-30 | FFCP PHASE2:Hg19::chr19:15442274..15442284,+#_82777620220e73f1fcedfe209f26fb9d | p@chr19:15442274..15442284, + |
| 4.17e-30 | FFCP PHASE1:Hg19::chr19:15442274..15442284,+#_82777620220e73f1fcedfe209f26fb9d | p@chr19:15442274..15442284, + |
