UBERON:0004807: Difference between revisions
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|located_in= | |located_in= | ||
|name=respiratory system epithelium | |name=respiratory system epithelium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001004 | |part_of=UBERON:0001004 | ||
Latest revision as of 17:48, 12 September 2014
| Name: | respiratory system epithelium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelium that is part of a respiratory system [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"apparatus respiratorius epithelial tissue" EXACT [OBOL:automatic] "apparatus respiratorius epithelium" EXACT [OBOL:automatic] "epithelial tissue of apparatus respiratorius" EXACT [OBOL:automatic] "epithelial tissue of respiratory system" EXACT [OBOL:automatic] "epithelium of apparatus respiratorius" EXACT [OBOL:automatic] "epithelium of respiratory system" EXACT [OBOL:automatic] "respiratory system epithelial tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000483(epithelium) |
|---|---|
| part_of: | UBERON:0001004(respiratory system) |
Children
| is a: | UBERON:0003351 (pharyngeal epithelium),UBERON:0004802 (respiratory tract epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004807 (respiratory system epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.76e-68 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_765dbf335ac818f7ea541920241873ec | p4@uc009bpa.1 |
| 1.76e-68 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_765dbf335ac818f7ea541920241873ec | p4@uc009bpa.1 |
| 2.4e-67 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_f9c2d04a92288c9277511ff2f41c4e3e | p8@uc009bpa.1 |
| 2.4e-67 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_f9c2d04a92288c9277511ff2f41c4e3e | p8@uc009bpa.1 |
| 1.12e-65 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_b2a93077fc38e3aa16f742ff5696ef4a | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 1.12e-65 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_b2a93077fc38e3aa16f742ff5696ef4a | p1@ENSMUST00000103288, p1@uc009bpl.1 |
| 2.12e-64 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_982e97e6ba53d4e2bff677ab8f9ffdca | p@chr6:41491752..41491776, - |
| 2.12e-64 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_982e97e6ba53d4e2bff677ab8f9ffdca | p@chr12:108361918..108361930, - |
| 2.12e-64 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_982e97e6ba53d4e2bff677ab8f9ffdca | p@chr12:108361918..108361930, - |
| 2.12e-64 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_982e97e6ba53d4e2bff677ab8f9ffdca | p@chr6:41491752..41491776, - |
| 3.88e-63 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_e2355ba25bd1b0aa688d717ec71f133b | p2@ENSMUST00000103283 |
| 3.88e-63 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_e2355ba25bd1b0aa688d717ec71f133b | p2@ENSMUST00000103283 |
| 4.88e-63 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_93fb41e8df680d6d0423bc43bddb280c | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 4.88e-63 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_93fb41e8df680d6d0423bc43bddb280c | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
| 7.68e-62 | FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_03f02e3b6a87adae9866c2f0e51abd30 | p@chr9:44807434..44807445, - |
| 7.68e-62 | FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_03f02e3b6a87adae9866c2f0e51abd30 | p@chr9:44807434..44807445, - |
| 1.0e-61 | FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_ac6bc5639569d42b5643919f8dd2141a | p@chr6:41494001..41494028, + |
| 1.0e-61 | FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_ac6bc5639569d42b5643919f8dd2141a | p@chr6:41494001..41494028, + |
| 2.4e-61 | FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_bef061486a7c6ce59212a606045d526f | p@chr9:44809185..44809215, - |
| 2.4e-61 | FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_bef061486a7c6ce59212a606045d526f | p@chr9:44809185..44809215, - |
| 2.59e-61 | FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_61c55c53e5a9efc106e6bd4269001fb8 | p11@Prkcq |
| 2.59e-61 | FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_61c55c53e5a9efc106e6bd4269001fb8 | p11@Prkcq |
| 8.25e-61 | FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_d326a0fdce527a4d0957ac4ce3a2c30d | p@chr14:54791784..54791787, + |
| 8.25e-61 | FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_d326a0fdce527a4d0957ac4ce3a2c30d | p@chr14:54791784..54791787, + |
| 1.47e-60 | FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_ed5a853b72a97c61cac8019c5b606672 | p1@ENSMUST00000103263 |
| 1.47e-60 | FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_ed5a853b72a97c61cac8019c5b606672 | p1@ENSMUST00000103263 |
| 2.74e-60 | FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_0da8bd72e4c7efea02f033cc4a885fb2 | p5@Themis |
| 2.74e-60 | FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_0da8bd72e4c7efea02f033cc4a885fb2 | p5@Themis |
| 3.21e-60 | FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_9da51a9a2a8ad6a7afd343346a6ab89b | p5@uc009bpa.1 |
| 3.21e-60 | FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_9da51a9a2a8ad6a7afd343346a6ab89b | p5@uc009bpa.1 |
| 3.77e-60 | FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_f706b32351e725d2ae3faf4b7501eea8 | p@chr9:44793518..44793537, + |
| 3.77e-60 | FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_f706b32351e725d2ae3faf4b7501eea8 | p@chr9:44793518..44793537, + |
| 4.87e-60 | FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_8479071c913e01aad20b6b09e66d43c2 | p@chr6:41071548..41071565, + |
| 4.87e-60 | FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_8479071c913e01aad20b6b09e66d43c2 | p@chr6:41071548..41071565, + |
| 9.63e-60 | FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_33fbd8972cb3035a0df240c73b60c73b | p2@uc009bnp.1, p2@uc012eki.1 |
| 9.63e-60 | FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_33fbd8972cb3035a0df240c73b60c73b | p2@uc009bnp.1, p2@uc012eki.1 |
| 5.49e-59 | FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_9c901118005568e3743ce9cf98e0eeb1 | p5@Tcf7 |
| 5.49e-59 | FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_9c901118005568e3743ce9cf98e0eeb1 | p5@Tcf7 |
| 2.14e-58 | FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_eee90c65dfae176f4e6ad2c08dbec13d | p@chr14:61328148..61328173, + |
| 2.14e-58 | FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_eee90c65dfae176f4e6ad2c08dbec13d | p@chr14:61328148..61328173, + |
| 3.25e-58 | FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_a8beb9d89b685c586476ddceb45d775f | p2@uc009bpa.1 |
| 3.25e-58 | FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_a8beb9d89b685c586476ddceb45d775f | p2@uc009bpa.1 |
| 3.74e-58 | FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_ada92b532b2fef59ea453a5b44e1b1b2 | p2@Sh2d1a |
| 3.74e-58 | FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_ada92b532b2fef59ea453a5b44e1b1b2 | p2@Sh2d1a |
| 7.15e-58 | FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_ccf9215260319be977e93119bb9fb167 | p1@uc012ekr.1 |
| 7.15e-58 | FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_ccf9215260319be977e93119bb9fb167 | p1@uc012ekr.1 |
| 9.05e-58 | FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_88743330460920e646ffea6820eb5a21 | p2@1810009J06Rik |
| 9.05e-58 | FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_88743330460920e646ffea6820eb5a21 | p2@1810009J06Rik |
| 1.34e-57 | FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_7511f4ebf75c45ee47005fc549402cf7 | p1@uc012ekk.1 |
| 1.34e-57 | FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_7511f4ebf75c45ee47005fc549402cf7 | p1@uc012ekk.1 |
| 1.56e-57 | FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_4127bed598c9bd53b09c913a4947719d | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.56e-57 | FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_4127bed598c9bd53b09c913a4947719d | p3@uc009bpo.1, p3@uc009bpp.1 |
| 1.56e-57 | FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_4127bed598c9bd53b09c913a4947719d | p1@ENSMUST00000103265 |
| 1.56e-57 | FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_4127bed598c9bd53b09c913a4947719d | p1@ENSMUST00000103265 |
| 3.61e-57 | FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_e6695181c89e49b09ce9f8a78c73b43e | p@chr7:133512043..133512060, - |
| 3.61e-57 | FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_e6695181c89e49b09ce9f8a78c73b43e | p@chr7:133512043..133512060, - |
| 4.31e-57 | FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_53cfa673ab8b8fe51c9d1ad618edacb8 | p2@Gm5409 |
| 4.31e-57 | FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_53cfa673ab8b8fe51c9d1ad618edacb8 | p2@Gm5409 |
| 6.91e-57 | FFCP PHASE1:Mm9::chr16:48772215..48772256,-#_59a22c413bbe5908733fd14958b64382 | p4@Trat1 |
| 6.91e-57 | FFCP PHASE2:Mm9::chr16:48772215..48772256,-#_59a22c413bbe5908733fd14958b64382 | p4@Trat1 |
| 6.93e-57 | FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_fe44e78801439601b4268594f16a7d0b | p5@Trat1 |
| 6.93e-57 | FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_fe44e78801439601b4268594f16a7d0b | p5@Trat1 |
| 7.43e-57 | FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_836d2aebfdc9374def3cd9d51cc9aa85 | p@chr6:41489240..41489252, + |
| 7.43e-57 | FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_836d2aebfdc9374def3cd9d51cc9aa85 | p@chr6:41489240..41489252, + |
| 1.27e-56 | FFCP PHASE2:Mm9::chr6:41484314..41484337,+#_10af2cda84e27da490d40cb5ffa7e376 | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
| 1.27e-56 | FFCP PHASE1:Mm9::chr6:41484314..41484337,+#_10af2cda84e27da490d40cb5ffa7e376 | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
| 1.56e-56 | FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_c58bbb3c7f8c0728c3c30f566b0bfbd4 | p1@ENSMUST00000103282 |
| 1.56e-56 | FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_c58bbb3c7f8c0728c3c30f566b0bfbd4 | p1@ENSMUST00000103282 |
| 1.56e-56 | FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_c58bbb3c7f8c0728c3c30f566b0bfbd4 | p@chr6:41494376..41494389, - |
| 1.56e-56 | FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_c58bbb3c7f8c0728c3c30f566b0bfbd4 | p@chr6:41494376..41494389, - |
| 1.67e-56 | FFCP PHASE2:Mm9::chr6:41493801..41493826,+#_bcd4e53f5d6a81ebcb7cce4432d5fdf8 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
| 1.67e-56 | FFCP PHASE1:Mm9::chr6:41493801..41493826,+#_bcd4e53f5d6a81ebcb7cce4432d5fdf8 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
| 1.92e-56 | FFCP PHASE1:Mm9::chr6:41492643..41492662,+#_670dd56d23157575b1794bfe91ea865b | p@chr6:41492643..41492662, + |
| 1.92e-56 | FFCP PHASE2:Mm9::chr6:41492643..41492662,+#_670dd56d23157575b1794bfe91ea865b | p@chr6:41492643..41492662, + |
| 2.05e-56 | FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_82d7fb05a5861d5c17bfd433241bf16e | p@chr14:54794540..54794554, + |
| 2.05e-56 | FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_82d7fb05a5861d5c17bfd433241bf16e | p@chr14:54794540..54794554, + |
| 2.23e-56 | FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_17aa0aadd46903773f80e08751d906ed | p@chr6:41491801..41491815, - |
| 2.23e-56 | FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_17aa0aadd46903773f80e08751d906ed | p@chr6:41491801..41491815, - |
| 2.23e-56 | FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_17aa0aadd46903773f80e08751d906ed | p@chr14:54496363..54496388, + |
| 2.23e-56 | FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_17aa0aadd46903773f80e08751d906ed | p@chr14:54496363..54496388, + |
| 2.36e-56 | FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_f8a84f7a0c3cb6695cffef63b70b385d | p@chr6:41492605..41492621, + |
| 2.36e-56 | FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_f8a84f7a0c3cb6695cffef63b70b385d | p@chr6:41492605..41492621, + |
| 2.54e-56 | FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_acffd28a88b82d952c9c485abcf69057 | p1@Il13 |
| 2.54e-56 | FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_acffd28a88b82d952c9c485abcf69057 | p1@Il13 |
| 2.88e-56 | FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_76c7712af844d218791fa5dd19da2b58 | p7@Lat |
| 2.88e-56 | FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_76c7712af844d218791fa5dd19da2b58 | p7@Lat |
| 3.14e-56 | FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_6b0d87825bd068fd03a68a9ab2141fae | p@chr6:41138311..41138333, + |
| 3.14e-56 | FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_6b0d87825bd068fd03a68a9ab2141fae | p@chr6:41138311..41138333, + |
| 4.06e-56 | FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_6fd2166ea1badd49992f0ec35dee71da | p5@uc009bnp.1, p5@uc012eki.1 |
| 4.06e-56 | FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_6fd2166ea1badd49992f0ec35dee71da | p5@uc009bnp.1, p5@uc012eki.1 |
| 4.76e-56 | FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_fd4bd9a52375af57ea87b7cc347f59cb | p6@uc009bpa.1 |
| 4.76e-56 | FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_fd4bd9a52375af57ea87b7cc347f59cb | p6@uc009bpa.1 |
| 4.76e-56 | FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_fd4bd9a52375af57ea87b7cc347f59cb | p@chr4:125978325..125978339, - |
| 4.76e-56 | FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_fd4bd9a52375af57ea87b7cc347f59cb | p8@Lat |
| 4.76e-56 | FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_fd4bd9a52375af57ea87b7cc347f59cb | p@chr4:125978325..125978339, - |
| 4.76e-56 | FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_fd4bd9a52375af57ea87b7cc347f59cb | p8@Lat |
| 3.9e-55 | FFCP PHASE1:Mm9::chr19:10904535..10904553,-#_bced992b2c0a75ee6c3f4a98d20f51c5 | p2@Cd6 |
| 3.9e-55 | FFCP PHASE2:Mm9::chr19:10904535..10904553,-#_bced992b2c0a75ee6c3f4a98d20f51c5 | p2@Cd6 |
| 4.2e-55 | FFCP PHASE1:Mm9::chr11:52075039..52075066,+#_3f3f45c2182b7bb969019906c8097a8a | p@chr11:52075039..52075066, + |
| 4.2e-55 | FFCP PHASE2:Mm9::chr11:52075039..52075066,+#_3f3f45c2182b7bb969019906c8097a8a | p@chr11:52075039..52075066, + |
