FFCP PHASE1:Hg19::chr15:40544804..40544820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=56924 | |EntrezGene=entrezgene:56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16061 | |HGNC=HGNC:16061 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_ENST00000560684_5end | |association_with_transcript=52bp_to_ENST00000560684_5end | ||
|cluster_id=chr15:40544804..40544820,+ | |||
|description=CAGE_peak_7_at_PAK6_5end | |description=CAGE_peak_7_at_PAK6_5end | ||
|id=chr15:40544804..40544820,+ | |id=chr15:40544804..40544820,+ |
Revision as of 01:27, 25 July 2015
Short description: | p7@PAK6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000560684_5end |
EntrezGene: | 56924 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@PAK6 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.27e-18 | 7 |
germ cell | 2.27e-18 | 7 |
Merkel cell | 3.94e-12 | 2 |
epithelial cell | 4.71e-10 | 253 |
brush border epithelial cell | 6.66e-08 | 3 |
kidney cortex tubule cell | 6.66e-08 | 3 |
epithelial cell of proximal tubule | 6.66e-08 | 3 |
bladder cell | 6.96e-07 | 1 |
lower urinary tract cell | 6.96e-07 | 1 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 6.66e-08 | 3 |
region of nephron tubule | 6.66e-08 | 3 |
proximal tubule | 6.66e-08 | 3 |
urinary bladder urothelium | 6.96e-07 | 1 |
wall of urinary bladder | 6.96e-07 | 1 |
mucosa of urinary bladder | 6.96e-07 | 1 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.00e-19 | 143 |
carcinoma | 1.28e-18 | 106 |
cancer | 2.88e-11 | 235 |
disease of cellular proliferation | 6.57e-11 | 239 |
germ cell and embryonal cancer | 5.60e-08 | 22 |
germ cell cancer | 5.60e-08 | 22 |
adenocarcinoma | 7.75e-07 | 25 |
Showing 1 to 7 of 7 entries