FFCP PHASE1:Hg19::chr17:38652393..38652403,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=84951 | |EntrezGene=entrezgene:84951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC=24352 | |HGNC=HGNC:24352 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q8IZW8 | |UniProt=uniprot:Q8IZW8 | ||
|association_with_transcript=-106bp_to_BC018706_5end | |association_with_transcript=-106bp_to_BC018706_5end | ||
|cluster_id=chr17:38652393..38652403,- | |||
|coexpression_cluster_id=C436 | |coexpression_cluster_id=C436 | ||
|description=CAGE_peak_16_at_TNS4_5end | |description=CAGE_peak_16_at_TNS4_5end |
Revision as of 16:31, 25 July 2015
Short description: | p16@TNS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_TNS4_5end |
Coexpression cluster: | C436_Sebocyte_Prostate_Keratinocyte_Urothelial_Small_Mammary_salivary |
Association with transcript: | -106bp_to_BC018706_5end |
EntrezGene: | 84951 |
HGNC: | 24352 |
UniProt: | Q8IZW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p16@TNS4 |
---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.96e-34 | 3 |
epithelial cell of tracheobronchial tree | 4.49e-31 | 9 |
epithelial cell of lower respiratory tract | 4.49e-31 | 9 |
respiratory epithelial cell | 1.75e-30 | 13 |
endo-epithelial cell | 2.80e-30 | 42 |
sebum secreting cell | 8.98e-24 | 2 |
epithelial cell of sweat gland | 8.98e-24 | 2 |
epithelial cell of skin gland | 8.98e-24 | 2 |
acinar cell of sebaceous gland | 8.98e-24 | 2 |
endodermal cell | 1.54e-21 | 58 |
Showing 1 to 10 of 30 entries
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.96e-34 | 3 |
epithelium of bronchus | 1.96e-34 | 3 |
skin gland | 8.98e-24 | 2 |
epidermis gland | 8.98e-24 | 2 |
gland of integumental system | 8.98e-24 | 2 |
sebaceous gland | 8.98e-24 | 2 |
skin sebaceous gland | 8.98e-24 | 2 |
sweat gland | 8.98e-24 | 2 |
sweat gland placode | 8.98e-24 | 2 |
sebaceous gland placode | 8.98e-24 | 2 |
Showing 1 to 10 of 33 entries