FFCP PHASE1:Mm9::chr19:30020272..30020289,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=77125|HGNC=|MCL_coexpression_id=495|UniProt=Q8BVZ5|association_with_transcript=0bp_to_ENSMUST00000025724,NM_001164724,uc008hed.2_5end|description=CAGE_peak_2_at_Il33_5end|id=chr19:30020272..30020289,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,3.06e-09,25;CL:0000075,1.05e-08,7;CL:0000239,9.98e-08,6;CL:0000677,9.98e-08,6;CL:0000584,9.98e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.70e-08!15;UBERON:0001242!5.68e-07!13;UBERON:0000060!5.68e-07!13;UBERON:0001262!5.68e-07!13;UBERON:0004786!5.68e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.10e-12,47;UBERON:0000160,1.86e-12,31;UBERON:0004119,2.01e-10,118;UBERON:0000925,2.01e-10,118;UBERON:0006595,2.01e-10,118;UBERON:0001007,3.02e-10,116;UBERON:0001555,3.02e-10,116;UBERON:0007026,3.02e-10,116;UBERON:0000344,2.91e-09,15;UBERON:0004921,3.46e-09,114;UBERON:0001242,1.27e-07,13;UBERON:0001262,1.27e-07,13;UBERON:0004786,1.27e-07,13|phase1_expression=4.48416771893423,41.528073509084,31.8499467572675,25.1045295384669,25.0447864973174,9.40123922706583,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,8.79958325363737,5.27641346454491,18.3754228516806,10.7690499039769,11.4199753323521,2.66032787238923,7.05684363327806,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0.439372365468944,0.388859798148567,4.61955191363696,2.87505128729943,0,0,0,4.11615097657515,0.286533439938757,2.06268836910977,0,0,0,4.40497891689872,0,0,0,0,2.39680088414724,1.53687322128622,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0,0,0,0.186399445825301,2.19605960666234,13.4517376990078,2.89864488701678,0,33.9985666853875,0,0,0,3.93244376368905,0,0,0,16.0561498545416,0,0,0,273.644675838175,225.997000003788,231.024671371756,11.7609396110632,4.14300613835475,0,0,0.304465478312141,0,0.753613202763113,0.705532242814229,0.125666591329675,1.23597483867187,0.578397427679647,0,0,0.220841518460394,0,1.86391761218122,0.292780797011547,0,21.7138496927303,0,0,0.127070227073065,0.449371918214468,0,0.125654352112864,0.347648640384553,0.511430914660661,0,0.324482526135515,0.407357455401265,0.124406970610093,0,2.31486041475121,0.130120442962704,0,0,0.150704817835715,0.408218994907967,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,1.44988040774851,0.703578179943289,0.720248245844059,0.710234206755631,0.196764231747404,1.23413690309903,1.62773761325285,1.87791380979733,0.700592054203017,0.987359099480883,0.985004784474571,0.486412857275134,0.146199987425332,0.878200461164203,1.74468344388483,1.47202963994889,0.102904612379284,21.8076396769307,17.1892868331304,0,1.16118335930219,0.38660238396628,0.80673409849337,0.444756087689741,2.09248188723815,16.6085171540579,3.12928013975621,0.251335208800269,0.596869416123452,1.75467678407208,20.6728463990471,13.8328351919804,6.96994456390285,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,1.16371492300575,0.631222379012867,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,1.01430060694251,1.20588579876208,1.2731292589071,0.575392274901621,0.648540907100142,0.274561413188081,2.87536413054709,2.60498663367952,1.5601883655728,2.02063102357689,1.07638448113147,0.482443521363367,0.923765950833023,0.37898282354097,0,0.169745085775188,0,0.335012514883631,0,1.17080188714679,1.26108115284953,0.664394068946325,0.159454768657487,1.63863314715738,0.863424909329478,1.59113964439663,0,0,0.491764273019036,0.827810238914197,0,0,0,1.00988370881749,1.26203287766503,1.17131623288992,0.215423397732799,1.19484398976276,0.891194696329576,0,0,0.292255857911312,0,0.642642632843614,1.70328102249922,0,0.162886959353576,0.659880491890142,0,0,0,0,0.295301892880773,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0.329098041204242,1.522324745573,1.40803024838226,0,0.882113592219848,15.3344215235576,0,0.542816324353403,2.38744688006273,1.47726809770555,22.7355052571284,0,0,0.206386867963223,0.555583582109135,0.188368457004691,0,0,0,0,0,109.787121071738,0,0.406638934253697,1.29606408986162,3.97267762427491,5.02233896616208,6.20375993370175,6.19900917940019,16.2288684030098,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.608175645870493,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0.302899349844443,0,0.201652370273681,0.292373642219257,0.0962118416403295,0.116876902181569,3.62768613784338,0,0,0,4.82973985080476,0.750729901804728,3.29672923681077,382.861925035212,0,1.12950368523413,1.38097570952153,0.572895513439397,0.859265911718438,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,1.21553358534147,0.419226325255965,0.551530525350042,0,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.715308569841963,1.0174249164263,0.752875043322645,0.338458431566706,0.182927972872773,1.05227884575137,0,1.12228454331548,0.474540072496697,0.197008964751127,0,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.644613162144895,0.382576664137687,0.441182838239031,0.927471342481686|short_description=p2@Il33}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:77125 | |||
|HGNC= | |||
|MCL_coexpression_id=495 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BVZ5 | |||
|association_with_transcript=0bp_to_ENSMUST00000025724,NM_001164724,uc008hed.2_5end | |||
|cluster_id=chr19:30020272..30020289,+ | |||
|description=CAGE_peak_2_at_Il33_5end | |||
|id=chr19:30020272..30020289,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.06e-09,25;CL:0000075,1.05e-08,7;CL:0000239,9.98e-08,6;CL:0000677,9.98e-08,6;CL:0000584,9.98e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.70e-08!15;UBERON:0001242!5.68e-07!13;UBERON:0000060!5.68e-07!13;UBERON:0001262!5.68e-07!13;UBERON:0004786!5.68e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.10e-12,47;UBERON:0000160,1.86e-12,31;UBERON:0004119,2.01e-10,118;UBERON:0000925,2.01e-10,118;UBERON:0006595,2.01e-10,118;UBERON:0001007,3.02e-10,116;UBERON:0001555,3.02e-10,116;UBERON:0007026,3.02e-10,116;UBERON:0000344,2.91e-09,15;UBERON:0004921,3.46e-09,114;UBERON:0001242,1.27e-07,13;UBERON:0001262,1.27e-07,13;UBERON:0004786,1.27e-07,13 | |||
|phase1_expression=4.48416771893423,41.528073509084,31.8499467572675,25.1045295384669,25.0447864973174,9.40123922706583,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,8.79958325363737,5.27641346454491,18.3754228516806,10.7690499039769,11.4199753323521,2.66032787238923,7.05684363327806,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,0.816677425049476,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0.439372365468944,0.388859798148567,4.61955191363696,2.87505128729943,0,0,0,4.11615097657515,0.286533439938757,2.06268836910977,0,0,0,4.40497891689872,0,0,0,0,2.39680088414724,1.53687322128622,0,0,0,0,0,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0,0,0,0.186399445825301,2.19605960666234,13.4517376990078,2.89864488701678,0,33.9985666853875,0,0,0,3.93244376368905,0,0,0,16.0561498545416,0,0,0,273.644675838175,225.997000003788,231.024671371756,11.7609396110632,4.14300613835475,0,0,0.304465478312141,0,0.753613202763113,0.705532242814229,0.125666591329675,1.23597483867187,0.578397427679647,0,0,0.220841518460394,0,1.86391761218122,0.292780797011547,0,21.7138496927303,0,0,0.127070227073065,0.449371918214468,0,0.125654352112864,0.347648640384553,0.511430914660661,0,0.324482526135515,0.407357455401265,0.124406970610093,0,2.31486041475121,0.130120442962704,0,0,0.150704817835715,0.408218994907967,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,1.44988040774851,0.703578179943289,0.720248245844059,0.710234206755631,0.196764231747404,1.23413690309903,1.62773761325285,1.87791380979733,0.700592054203017,0.987359099480883,0.985004784474571,0.486412857275134,0.146199987425332,0.878200461164203,1.74468344388483,1.47202963994889,0.102904612379284,21.8076396769307,17.1892868331304,0,1.16118335930219,0.38660238396628,0.80673409849337,0.444756087689741,2.09248188723815,16.6085171540579,3.12928013975621,0.251335208800269,0.596869416123452,1.75467678407208,20.6728463990471,13.8328351919804,6.96994456390285,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,1.16371492300575,0.631222379012867,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,0,0,0,0,1.01430060694251,1.20588579876208,1.2731292589071,0.575392274901621,0.648540907100142,0.274561413188081,2.87536413054709,2.60498663367952,1.5601883655728,2.02063102357689,1.07638448113147,0.482443521363367,0.923765950833023,0.37898282354097,0,0.169745085775188,0,0.335012514883631,0,1.17080188714679,1.26108115284953,0.664394068946325,0.159454768657487,1.63863314715738,0.863424909329478,1.59113964439663,0,0,0.491764273019036,0.827810238914197,0,0,0,1.00988370881749,1.26203287766503,1.17131623288992,0.215423397732799,1.19484398976276,0.891194696329576,0,0,0.292255857911312,0,0.642642632843614,1.70328102249922,0,0.162886959353576,0.659880491890142,0,0,0,0,0.295301892880773,0,1.03371317267288,0,0,0,0,0,0.340439605753788,0,0,0,0,0.535106452806212,0.329098041204242,1.522324745573,1.40803024838226,0,0.882113592219848,15.3344215235576,0,0.542816324353403,2.38744688006273,1.47726809770555,22.7355052571284,0,0,0.206386867963223,0.555583582109135,0.188368457004691,0,0,0,0,0,109.787121071738,0,0.406638934253697,1.29606408986162,3.97267762427491,5.02233896616208,6.20375993370175,6.19900917940019,16.2288684030098,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.608175645870493,0.205421914329655,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0.302899349844443,0,0.201652370273681,0.292373642219257,0.0962118416403295,0.116876902181569,3.62768613784338,0,0,0,4.82973985080476,0.750729901804728,3.29672923681077,382.861925035212,0,1.12950368523413,1.38097570952153,0.572895513439397,0.859265911718438,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,1.21553358534147,0.419226325255965,0.551530525350042,0,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.715308569841963,1.0174249164263,0.752875043322645,0.338458431566706,0.182927972872773,1.05227884575137,0,1.12228454331548,0.474540072496697,0.197008964751127,0,0.309873682371932,0.578719832943424,0.499621155875892,0.701794825336225,0.644613162144895,0.382576664137687,0.441182838239031,0.927471342481686 | |||
|short_description=p2@Il33 | |||
}} |
Revision as of 21:22, 3 August 2015
Short description: | p2@Il33 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Il33_5end |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | 0bp_to_ENSMUST00000025724, NM_001164724, uc008hed.2_5end |
EntrezGene: | 77125 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.06e-09 | 25 |
columnar/cuboidal epithelial cell | 1.05e-08 | 7 |
brush border epithelial cell | 9.98e-08 | 6 |
gut absorptive cell | 9.98e-08 | 6 |
enterocyte | 9.98e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.10e-12 | 47 |
intestine | 1.86e-12 | 31 |
endoderm-derived structure | 2.01e-10 | 118 |
endoderm | 2.01e-10 | 118 |
presumptive endoderm | 2.01e-10 | 118 |
digestive system | 3.02e-10 | 116 |
digestive tract | 3.02e-10 | 116 |
primitive gut | 3.02e-10 | 116 |
mucosa | 2.91e-09 | 15 |
subdivision of digestive tract | 3.46e-09 | 114 |
intestinal mucosa | 1.27e-07 | 13 |
wall of intestine | 1.27e-07 | 13 |
gastrointestinal system mucosa | 1.27e-07 | 13 |