FFCP PHASE1:Mm9::chr11:74876617..74876618,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2711|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:74876617..74876618,+|id=chr11:74876617..74876618,+|ontology_enrichment_celltype=CL:0000548!1.58e-16!115;CL:0000004!1.58e-16!115;CL:0000255!1.58e-16!115;CL:0002371!1.12e-15!118;CL:0000144!7.21e-15!121;CL:0000012!7.21e-15!121;CL:0000219!1.48e-13!54;CL:0002031!6.52e-11!25;CL:0000034!1.40e-10!97;CL:0002320!1.25e-09!46;CL:0000134!1.25e-09!46;CL:0000723!1.62e-09!91;CL:0000048!1.62e-09!91;CL:0000063!2.43e-08!66;CL:0000988!2.44e-07!32;CL:0002032!2.44e-07!32;CL:0000037!2.44e-07!32;CL:0000566!2.44e-07!32;CL:0000837!2.44e-07!32;CL:0000838!3.25e-07!12;CL:0000738!7.53e-07!17;CL:0002087!7.53e-07!17|ontology_enrichment_celltype_v019_2=CL:0000050,3.10e-10,9;CL:0000219,3.60e-09,54;CL:0002320,8.33e-09,46;CL:0000134,8.33e-09,46;CL:0000764,1.10e-08,3;CL:0000765,1.10e-08,3;CL:0000038,1.10e-08,3;CL:0000547,1.10e-08,3;CL:0000151,1.20e-08,3;CL:0000499,1.20e-08,3;CL:0000327,1.20e-08,3;CL:0000839,3.90e-07,13;CL:0000057,4.10e-07,1;CL:0000632,4.10e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,1.10e-08,3;DOID:0060083,1.10e-08,3;DOID:1240,1.10e-08,3|ontology_enrichment_uberon=UBERON:0002384!1.25e-09!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.33e-09,46|phase1_expression=0,0,0,1.81478526784098,3.00537437967808,0,0.934450562382103,0.387369970324729,0.140788722151667,0.234064526321993,0.34243593645101,0,0.171200729931206,0.262261207256992,0,0,2.09868563438444,0.788655413395594,0.274228867211478,1.69755860719212,0,0,0.522399578277871,0.159992422793407,0.45881856213434,0,0,0,1.52018735565099,0,0,13.3356441426523,2.46025915033828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.279972843250725,4.31257693094915,0.503347818173209,2.17608642603403,0.672187598284928,0.257259436035947,0,0,0.404632921719196,0,0,0.338844532069132,3.55717918444456,0,0,0,0,0.768436610643109,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,4.5960939330501,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0.226714680320357,0,4.30211938490693,0,0,1.94932925234301,0.448026887097336,0,0,2.07828803682295,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,0,0.887943813496259,0.358855426437903,0.839423081820392,0,0,0,0,0,0,0,0,0.859265911718438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr11:74876617..74876618,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2711 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:74876617..74876618,+ | |||
|description=CAGE_peak_at_chr11:74876617..74876618,+ | |||
|id=chr11:74876617..74876618,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.58e-16!115;CL:0000004!1.58e-16!115;CL:0000255!1.58e-16!115;CL:0002371!1.12e-15!118;CL:0000144!7.21e-15!121;CL:0000012!7.21e-15!121;CL:0000219!1.48e-13!54;CL:0002031!6.52e-11!25;CL:0000034!1.40e-10!97;CL:0002320!1.25e-09!46;CL:0000134!1.25e-09!46;CL:0000723!1.62e-09!91;CL:0000048!1.62e-09!91;CL:0000063!2.43e-08!66;CL:0000988!2.44e-07!32;CL:0002032!2.44e-07!32;CL:0000037!2.44e-07!32;CL:0000566!2.44e-07!32;CL:0000837!2.44e-07!32;CL:0000838!3.25e-07!12;CL:0000738!7.53e-07!17;CL:0002087!7.53e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,3.10e-10,9;CL:0000219,3.60e-09,54;CL:0002320,8.33e-09,46;CL:0000134,8.33e-09,46;CL:0000764,1.10e-08,3;CL:0000765,1.10e-08,3;CL:0000038,1.10e-08,3;CL:0000547,1.10e-08,3;CL:0000151,1.20e-08,3;CL:0000499,1.20e-08,3;CL:0000327,1.20e-08,3;CL:0000839,3.90e-07,13;CL:0000057,4.10e-07,1;CL:0000632,4.10e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.10e-08,3;DOID:0060083,1.10e-08,3;DOID:1240,1.10e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.25e-09!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.33e-09,46 | |||
|phase1_expression=0,0,0,1.81478526784098,3.00537437967808,0,0.934450562382103,0.387369970324729,0.140788722151667,0.234064526321993,0.34243593645101,0,0.171200729931206,0.262261207256992,0,0,2.09868563438444,0.788655413395594,0.274228867211478,1.69755860719212,0,0,0.522399578277871,0.159992422793407,0.45881856213434,0,0,0,1.52018735565099,0,0,13.3356441426523,2.46025915033828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.439372365468944,0.194429899074283,0.279972843250725,4.31257693094915,0.503347818173209,2.17608642603403,0.672187598284928,0.257259436035947,0,0,0.404632921719196,0,0,0.338844532069132,3.55717918444456,0,0,0,0,0.768436610643109,0,0.135005938331691,0.210324961351382,0.285650984403804,0,0,0,4.5960939330501,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0.226714680320357,0,4.30211938490693,0,0,1.94932925234301,0.448026887097336,0,0,2.07828803682295,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0.233530684734339,0,0,0,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0.358794827043824,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0.283076530788832,0.809621403349789,0,0.395287777946524,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,0,0.887943813496259,0.358855426437903,0.839423081820392,0,0,0,0,0,0,0,0,0.859265911718438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:74876617..74876618,+ | |||
}} |
Latest revision as of 23:04, 3 August 2015
Short description: | p@chr11:74876617..74876618, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:74876617..74876618, + |
Coexpression cluster: | MCL_coexpression_mm9:2711 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 3.10e-10 | 9 |
motile cell | 3.60e-09 | 54 |
connective tissue cell | 8.33e-09 | 46 |
mesenchymal cell | 8.33e-09 | 46 |
erythroid lineage cell | 1.10e-08 | 3 |
erythroblast | 1.10e-08 | 3 |
erythroid progenitor cell | 1.10e-08 | 3 |
proerythroblast | 1.10e-08 | 3 |
secretory cell | 1.20e-08 | 3 |
stromal cell | 1.20e-08 | 3 |
extracellular matrix secreting cell | 1.20e-08 | 3 |
myeloid lineage restricted progenitor cell | 3.90e-07 | 13 |
fibroblast | 4.10e-07 | 1 |
hepatic stellate cell | 4.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.33e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.10e-08 | 3 |
immune system cancer | 1.10e-08 | 3 |
leukemia | 1.10e-08 | 3 |