FFCP PHASE1:Mm9::chr19:39303752..39303756,+: Difference between revisions
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{{FFCP|EntrezGene=638988|HGNC=|MCL_coexpression_id=128|UniProt=|association_with_transcript=8bp_to_NR_033614,uc008hjx.2_5end|description=CAGE_peak_1_at_Cyp2c53-ps_5end|id=chr19:39303752..39303756,+|ontology_enrichment_celltype=CL:0000181!3.00e-20!5;CL:0000417!3.00e-20!5;CL:0000668!3.00e-20!5;CL:0000412!3.00e-20!5;CL:0000182!3.00e-20!5;CL:0000414!2.50e-09!11;CL:0000223!1.23e-07!20;CL:0000057!2.11e-07!1;CL:0000632!2.11e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,9.17e-41,5;CL:0000057,1.16e-13,1;CL:0000632,1.16e-13,1;CL:0000223,1.25e-10,20;CL:0000066,1.36e-08,25;CL:0002320,3.73e-07,46;CL:0000134,3.73e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.64e-17!22;UBERON:0007499!7.64e-17!22;UBERON:0006925!7.64e-17!22;UBERON:0009497!7.64e-17!22;UBERON:0000015!7.64e-17!22;UBERON:0002423!7.64e-17!22;UBERON:0006235!7.64e-17!22;UBERON:0008835!7.64e-17!22;UBERON:0003894!7.64e-17!22;UBERON:0004161!7.64e-17!22;UBERON:0008836!7.64e-17!22;UBERON:0009854!4.46e-16!23;UBERON:0009856!4.46e-16!23;UBERON:0002365!9.97e-15!25;UBERON:0002330!9.97e-15!25;UBERON:0003914!2.46e-09!47;UBERON:0003929!7.09e-08!55;UBERON:0005256!1.96e-07!47;UBERON:0005172!4.30e-07!49;UBERON:0005173!4.30e-07!49;UBERON:0002417!4.30e-07!49;UBERON:0000916!4.30e-07!49;UBERON:0005057!8.85e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-20,22;UBERON:0007499,1.08e-20,22;UBERON:0006925,1.08e-20,22;UBERON:0009497,1.08e-20,22;UBERON:0000015,1.08e-20,22;UBERON:0002423,1.08e-20,22;UBERON:0006235,1.08e-20,22;UBERON:0008835,1.08e-20,22;UBERON:0003894,1.08e-20,22;UBERON:0004161,1.08e-20,22;UBERON:0008836,1.08e-20,22;UBERON:0009854,8.30e-20,23;UBERON:0009856,8.30e-20,23;UBERON:0002365,3.00e-18,25;UBERON:0002330,3.00e-18,25;UBERON:0005256,3.00e-10,45;UBERON:0003914,8.06e-10,47;UBERON:0005172,2.00e-09,49;UBERON:0005173,2.00e-09,49;UBERON:0002417,2.00e-09,49;UBERON:0000916,2.00e-09,49;UBERON:0003929,2.06e-08,55;UBERON:0002368,1.01e-07,60;UBERON:0003104,1.35e-07,61;UBERON:0009142,1.35e-07,61;UBERON:0002384,3.73e-07,46;UBERON:0002530,3.91e-07,65;UBERON:0000490,5.00e-07,66;UBERON:0009569,5.00e-07,66|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46466264679525,26.5188820146023,12.4131734076698,49.3830077260229,12.0967259516281,3.65155492342555,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Cyp2c53-ps}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:638988 | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=8bp_to_NR_033614,uc008hjx.2_5end | |||
|cluster_id=chr19:39303752..39303756,+ | |||
|description=CAGE_peak_1_at_Cyp2c53-ps_5end | |||
|id=chr19:39303752..39303756,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.00e-20!5;CL:0000417!3.00e-20!5;CL:0000668!3.00e-20!5;CL:0000412!3.00e-20!5;CL:0000182!3.00e-20!5;CL:0000414!2.50e-09!11;CL:0000223!1.23e-07!20;CL:0000057!2.11e-07!1;CL:0000632!2.11e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.17e-41,5;CL:0000057,1.16e-13,1;CL:0000632,1.16e-13,1;CL:0000223,1.25e-10,20;CL:0000066,1.36e-08,25;CL:0002320,3.73e-07,46;CL:0000134,3.73e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.64e-17!22;UBERON:0007499!7.64e-17!22;UBERON:0006925!7.64e-17!22;UBERON:0009497!7.64e-17!22;UBERON:0000015!7.64e-17!22;UBERON:0002423!7.64e-17!22;UBERON:0006235!7.64e-17!22;UBERON:0008835!7.64e-17!22;UBERON:0003894!7.64e-17!22;UBERON:0004161!7.64e-17!22;UBERON:0008836!7.64e-17!22;UBERON:0009854!4.46e-16!23;UBERON:0009856!4.46e-16!23;UBERON:0002365!9.97e-15!25;UBERON:0002330!9.97e-15!25;UBERON:0003914!2.46e-09!47;UBERON:0003929!7.09e-08!55;UBERON:0005256!1.96e-07!47;UBERON:0005172!4.30e-07!49;UBERON:0005173!4.30e-07!49;UBERON:0002417!4.30e-07!49;UBERON:0000916!4.30e-07!49;UBERON:0005057!8.85e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.08e-20,22;UBERON:0007499,1.08e-20,22;UBERON:0006925,1.08e-20,22;UBERON:0009497,1.08e-20,22;UBERON:0000015,1.08e-20,22;UBERON:0002423,1.08e-20,22;UBERON:0006235,1.08e-20,22;UBERON:0008835,1.08e-20,22;UBERON:0003894,1.08e-20,22;UBERON:0004161,1.08e-20,22;UBERON:0008836,1.08e-20,22;UBERON:0009854,8.30e-20,23;UBERON:0009856,8.30e-20,23;UBERON:0002365,3.00e-18,25;UBERON:0002330,3.00e-18,25;UBERON:0005256,3.00e-10,45;UBERON:0003914,8.06e-10,47;UBERON:0005172,2.00e-09,49;UBERON:0005173,2.00e-09,49;UBERON:0002417,2.00e-09,49;UBERON:0000916,2.00e-09,49;UBERON:0003929,2.06e-08,55;UBERON:0002368,1.01e-07,60;UBERON:0003104,1.35e-07,61;UBERON:0009142,1.35e-07,61;UBERON:0002384,3.73e-07,46;UBERON:0002530,3.91e-07,65;UBERON:0000490,5.00e-07,66;UBERON:0009569,5.00e-07,66 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.46466264679525,26.5188820146023,12.4131734076698,49.3830077260229,12.0967259516281,3.65155492342555,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Cyp2c53-ps | |||
}} |
Revision as of 00:55, 4 August 2015
Short description: | p1@Cyp2c53-ps |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cyp2c53-ps_5end |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | 8bp_to_NR_033614, uc008hjx.2_5end |
EntrezGene: | 638988 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.17e-41 | 5 |
fibroblast | 1.16e-13 | 1 |
hepatic stellate cell | 1.16e-13 | 1 |
endodermal cell | 1.25e-10 | 20 |
epithelial cell | 1.36e-08 | 25 |
connective tissue cell | 3.73e-07 | 46 |
mesenchymal cell | 3.73e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
liver | 1.08e-20 | 22 |
epithelial sac | 1.08e-20 | 22 |
digestive gland | 1.08e-20 | 22 |
epithelium of foregut-midgut junction | 1.08e-20 | 22 |
anatomical boundary | 1.08e-20 | 22 |
hepatobiliary system | 1.08e-20 | 22 |
foregut-midgut junction | 1.08e-20 | 22 |
hepatic diverticulum | 1.08e-20 | 22 |
liver primordium | 1.08e-20 | 22 |
septum transversum | 1.08e-20 | 22 |
liver bud | 1.08e-20 | 22 |
digestive tract diverticulum | 8.30e-20 | 23 |
sac | 8.30e-20 | 23 |
exocrine gland | 3.00e-18 | 25 |
exocrine system | 3.00e-18 | 25 |
trunk mesenchyme | 3.00e-10 | 45 |
epithelial tube | 8.06e-10 | 47 |
abdomen element | 2.00e-09 | 49 |
abdominal segment element | 2.00e-09 | 49 |
abdominal segment of trunk | 2.00e-09 | 49 |
abdomen | 2.00e-09 | 49 |
gut epithelium | 2.06e-08 | 55 |
endocrine gland | 1.01e-07 | 60 |
mesenchyme | 1.35e-07 | 61 |
entire embryonic mesenchyme | 1.35e-07 | 61 |
connective tissue | 3.73e-07 | 46 |
gland | 3.91e-07 | 65 |
unilaminar epithelium | 5.00e-07 | 66 |
subdivision of trunk | 5.00e-07 | 66 |