Personal tools

FFCP PHASE1:Mm9::chr8:74967602..74967659,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=73316|HGNC=|MCL_coexpression_id=0|UniProt=Q8BL82,Q9D9Q6,B1Q2L7|association_with_transcript=17bp_to_NM_028500,uc009mfx.1_5end|description=CAGE_peak_1_at_Calr3_5end|id=chr8:74967602..74967659,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!1.53e-07!15;UBERON:0003101!4.57e-07!16;UBERON:0000079!4.57e-07!16;UBERON:0000991!5.56e-07!18;UBERON:0005564!5.56e-07!18;UBERON:0000473!6.60e-07!14;UBERON:0004176!8.20e-07!17;UBERON:0009196!8.20e-07!17;UBERON:0009117!8.20e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.22e-08,15;UBERON:0000991,9.64e-08,18;UBERON:0005564,9.64e-08,18;UBERON:0000473,1.17e-07,14;UBERON:0004176,1.50e-07,17;UBERON:0009196,1.50e-07,17;UBERON:0009117,1.50e-07,17;UBERON:0003101,1.99e-07,16;UBERON:0000079,1.99e-07,16|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0.563154888606667,0.70219357896598,0.68487187290202,0.8774937489487,0.342401459862411,0.0874204024189974,0.333109761815663,2.02475267389826,0.699561878128147,0.630924330716475,0.822686601634433,1.27316895539409,40.8207792725135,0.496454756004426,0.522399578277871,0.159992422793407,0,1.14846392823004,0.430761996159075,0,0.380046838912748,0,0.221730510655305,3.81018404075779,3.69038872550742,0,1.73310971850765,2.82598897109437,1.83752420636132,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0,1.56478268869608,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,1.43752564364972,0.167782606057736,0,0.336093799142464,1.54355661621568,0.573066879877513,0,0,1.05798195854407,0,0,0,0,0,0,0,1.92109152660777,0.311068836925433,0,0.420649922702764,0.571301968807607,0.662605622854841,0.61245399607477,0.479227355091182,0.919218786610021,0,0.893811366596314,1.22885226604995,0.395658863190582,0.457438218012048,0.52091337055676,0.837548997004143,1.12552522006336,1.5279824777681,1.17851434189467,1.42371680799103,0.559198337475902,0.302904773332736,0.302286240427142,1.44932244350839,3.44169550792555,2.03991400112325,1.61910957491345,7.79731700937203,3.58421509677868,4.77511028447956,0.511290967734173,0,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,1.01343946190039,0,6.62266502370548,1.03575153458869,2.67195850316685,1.04091196059682,1.82679286987285,0.922461989024234,2.56228488939458,2.4693628498498,1.75933227861546,0.741584903203122,8.82056077211461,0.884610551949874,1.61766849947409,1.32504911076236,1.93950101254089,0,1.17112318804619,1.25668024088073,0.255457055208591,1.07833612055328,0.599902730993408,1.14363204365758,2.09706895166752,1.83000241127451,0.879580464790051,1.73824320192276,1.27857728665165,1.0389402227978,1.1356888414743,1.93494791315601,1.7416975885413,6.06534620240819,0.631325567659422,1.82168620147785,0.919608417733892,1.26043490863744,1.35634336052144,1.42876648217788,2.69038812598185,2.52994656311268,2.84573707812917,1.07783996466421,1.13463648100692,1.40760899331159,1.09597866213787,1.11218899690239,1.74126083261083,1.4404749548556,1.59227413454795,2.80885274925294,2.05878325691772,1.70498099637356,0.828503090142008,0.938104239924385,0.900310307305074,0.946978942340841,0.196764231747404,1.07986979021165,0.697601834251224,0,0.700592054203017,0.658239399653922,1.14917224855367,1.70244500046297,2.04679982395465,2.63460138349261,2.81833479396781,0.841159794256509,1.74937841044784,0,0.264450566663544,0.426576501070468,0.232236671860439,1.41754207454303,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,0.823494773620054,1.25667604400135,0.596869416123452,0.58489226135736,1.79763881730844,0.864552199498777,0.597423819763102,1.51734320762465,1.14248512609729,1.1270773567308,1.22190796707189,0.775809948670503,0.841629838683823,1.83385957660346,3.24742325555125,2.511979645462,2.34454611451421,2.37162101669719,2.00214126859313,1.17935397067922,0.449724224769707,0.811440485554012,0.964708639009667,0.763877555344259,1.43848068725405,0.972811360650212,1.92192989231657,2.87536413054709,1.48856379067401,1.5601883655728,3.03094653536534,2.87035861635059,3.37710464954357,1.29327233116623,1.70542270593436,1.30371981153621,1.52770577197669,0.704070744865506,0.837531287209079,0.714130922658041,0.585400943573396,0.315270288212382,1.55025282754142,0.478364305972461,0.81931657357869,0.690739927463582,0.289298117163023,0,0,1.47529281905711,1.37968373152366,2.0871576698413,2.22702204525186,0.491804836130026,4.79694761688309,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.876767573733936,0.395287777946524,0.963963949265421,1.13552068166615,1.42452482933804,1.46598263418218,0.989820737835213,0,1.21390318077491,2.11626489875326,2.07465587731488,1.47650946440386,1.84461088766356,1.29214146584111,2.18120237686503,0.356497378384721,1.58018378967908,1.05418608574999,0,4.08527526904546,1.26042765821917,2.19909762430683,2.57204442037911,1.77340233642274,2.14042581122485,2.63278432963394,2.13125464380219,0.23467170806371,1.90648863777438,0.882113592219848,1.31909002353184,0.807322133479528,0.542816324353403,0.596861720015682,0.492422699235184,0.291480836629851,2.22510362412612,0.683483523191411,0.619160603889667,0.555583582109135,0,0.546776910884101,0,4.41943917984024,2.93898049879682,2.07299960706636,1.90934123603023,0.790839983952838,2.43983360552218,1.18805874903981,0.836353184057875,0.87345025498471,1.21377911746339,0.909188012978695,1.04702376793612,0.518459893167171,1.24267862617385,155.015558138152,1.94371509857172,1.65458490457098,1.16670713006429,2.45403664607689,3.54807863530634,2.93393096614385,2.47388331203505,2.09718688851422,3.14059357073808,135.086072934939,1.26404448251271,1.01362607645082,0.924398614483445,1.55904987573354,0.716106782669926,0.993406773906324,1.08175904567972,0.886137163047463,0.504832249740738,0.685861259894999,0.705783295957884,0.877120926657772,0.577271049841977,0.584384510907845,1.81384306892169,0.887943813496259,1.70456327558004,0.671538465456314,2.89784391048286,0.93841237725591,0.549454872801795,0.214368379079066,2.00628841614145,0.564751842617067,0.920650473014354,1.14579102687879,0.68741272937475,0,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,0,0.31136204275253,2.39414924040619,1.19513524027894,0.486213434136588,0.209613162627982,0,0.888986911206461,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,1.50901073108861,1.03005658216871,1.47257850531199,1.14870937911227,0.952587382566147,1.0429589335037,0.77163688185482,1.23625770240992,1.47198920134397,1.37147700954166,1.24233064311536,0.476872379894642,0.581385666529314,1.41164070622996,1.35383372626682,1.28049581010941,1.05227884575137,1.90125759384206,1.68342681497322,1.30498519936592,1.0835493061312,0.409231043169689,1.70430525304563,0.771626443924566,0.999242311751784,2.10538447600868,1.07435527024149,1.53030665655075,2.20591419119516,2.31867835620421|short_description=p1@Calr3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:73316
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=uniprot:Q8BL82,uniprot:Q9D9Q6,uniprot:B1Q2L7
|association_with_transcript=17bp_to_NM_028500,uc009mfx.1_5end
|cluster_id=chr8:74967602..74967659,-
|description=CAGE_peak_1_at_Calr3_5end
|id=chr8:74967602..74967659,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003135!1.53e-07!15;UBERON:0003101!4.57e-07!16;UBERON:0000079!4.57e-07!16;UBERON:0000991!5.56e-07!18;UBERON:0005564!5.56e-07!18;UBERON:0000473!6.60e-07!14;UBERON:0004176!8.20e-07!17;UBERON:0009196!8.20e-07!17;UBERON:0009117!8.20e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.22e-08,15;UBERON:0000991,9.64e-08,18;UBERON:0005564,9.64e-08,18;UBERON:0000473,1.17e-07,14;UBERON:0004176,1.50e-07,17;UBERON:0009196,1.50e-07,17;UBERON:0009117,1.50e-07,17;UBERON:0003101,1.99e-07,16;UBERON:0000079,1.99e-07,16
|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0.563154888606667,0.70219357896598,0.68487187290202,0.8774937489487,0.342401459862411,0.0874204024189974,0.333109761815663,2.02475267389826,0.699561878128147,0.630924330716475,0.822686601634433,1.27316895539409,40.8207792725135,0.496454756004426,0.522399578277871,0.159992422793407,0,1.14846392823004,0.430761996159075,0,0.380046838912748,0,0.221730510655305,3.81018404075779,3.69038872550742,0,1.73310971850765,2.82598897109437,1.83752420636132,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0,1.56478268869608,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,1.43752564364972,0.167782606057736,0,0.336093799142464,1.54355661621568,0.573066879877513,0,0,1.05798195854407,0,0,0,0,0,0,0,1.92109152660777,0.311068836925433,0,0.420649922702764,0.571301968807607,0.662605622854841,0.61245399607477,0.479227355091182,0.919218786610021,0,0.893811366596314,1.22885226604995,0.395658863190582,0.457438218012048,0.52091337055676,0.837548997004143,1.12552522006336,1.5279824777681,1.17851434189467,1.42371680799103,0.559198337475902,0.302904773332736,0.302286240427142,1.44932244350839,3.44169550792555,2.03991400112325,1.61910957491345,7.79731700937203,3.58421509677868,4.77511028447956,0.511290967734173,0,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,1.01343946190039,0,6.62266502370548,1.03575153458869,2.67195850316685,1.04091196059682,1.82679286987285,0.922461989024234,2.56228488939458,2.4693628498498,1.75933227861546,0.741584903203122,8.82056077211461,0.884610551949874,1.61766849947409,1.32504911076236,1.93950101254089,0,1.17112318804619,1.25668024088073,0.255457055208591,1.07833612055328,0.599902730993408,1.14363204365758,2.09706895166752,1.83000241127451,0.879580464790051,1.73824320192276,1.27857728665165,1.0389402227978,1.1356888414743,1.93494791315601,1.7416975885413,6.06534620240819,0.631325567659422,1.82168620147785,0.919608417733892,1.26043490863744,1.35634336052144,1.42876648217788,2.69038812598185,2.52994656311268,2.84573707812917,1.07783996466421,1.13463648100692,1.40760899331159,1.09597866213787,1.11218899690239,1.74126083261083,1.4404749548556,1.59227413454795,2.80885274925294,2.05878325691772,1.70498099637356,0.828503090142008,0.938104239924385,0.900310307305074,0.946978942340841,0.196764231747404,1.07986979021165,0.697601834251224,0,0.700592054203017,0.658239399653922,1.14917224855367,1.70244500046297,2.04679982395465,2.63460138349261,2.81833479396781,0.841159794256509,1.74937841044784,0,0.264450566663544,0.426576501070468,0.232236671860439,1.41754207454303,0.403367049246685,0.22237804384487,1.52180500890047,0.949058123089023,0.823494773620054,1.25667604400135,0.596869416123452,0.58489226135736,1.79763881730844,0.864552199498777,0.597423819763102,1.51734320762465,1.14248512609729,1.1270773567308,1.22190796707189,0.775809948670503,0.841629838683823,1.83385957660346,3.24742325555125,2.511979645462,2.34454611451421,2.37162101669719,2.00214126859313,1.17935397067922,0.449724224769707,0.811440485554012,0.964708639009667,0.763877555344259,1.43848068725405,0.972811360650212,1.92192989231657,2.87536413054709,1.48856379067401,1.5601883655728,3.03094653536534,2.87035861635059,3.37710464954357,1.29327233116623,1.70542270593436,1.30371981153621,1.52770577197669,0.704070744865506,0.837531287209079,0.714130922658041,0.585400943573396,0.315270288212382,1.55025282754142,0.478364305972461,0.81931657357869,0.690739927463582,0.289298117163023,0,0,1.47529281905711,1.37968373152366,2.0871576698413,2.22702204525186,0.491804836130026,4.79694761688309,0,0.390438744296638,0.430846795465598,0.238968797952552,0.222798674082394,0.566153061577665,0.809621403349789,0.876767573733936,0.395287777946524,0.963963949265421,1.13552068166615,1.42452482933804,1.46598263418218,0.989820737835213,0,1.21390318077491,2.11626489875326,2.07465587731488,1.47650946440386,1.84461088766356,1.29214146584111,2.18120237686503,0.356497378384721,1.58018378967908,1.05418608574999,0,4.08527526904546,1.26042765821917,2.19909762430683,2.57204442037911,1.77340233642274,2.14042581122485,2.63278432963394,2.13125464380219,0.23467170806371,1.90648863777438,0.882113592219848,1.31909002353184,0.807322133479528,0.542816324353403,0.596861720015682,0.492422699235184,0.291480836629851,2.22510362412612,0.683483523191411,0.619160603889667,0.555583582109135,0,0.546776910884101,0,4.41943917984024,2.93898049879682,2.07299960706636,1.90934123603023,0.790839983952838,2.43983360552218,1.18805874903981,0.836353184057875,0.87345025498471,1.21377911746339,0.909188012978695,1.04702376793612,0.518459893167171,1.24267862617385,155.015558138152,1.94371509857172,1.65458490457098,1.16670713006429,2.45403664607689,3.54807863530634,2.93393096614385,2.47388331203505,2.09718688851422,3.14059357073808,135.086072934939,1.26404448251271,1.01362607645082,0.924398614483445,1.55904987573354,0.716106782669926,0.993406773906324,1.08175904567972,0.886137163047463,0.504832249740738,0.685861259894999,0.705783295957884,0.877120926657772,0.577271049841977,0.584384510907845,1.81384306892169,0.887943813496259,1.70456327558004,0.671538465456314,2.89784391048286,0.93841237725591,0.549454872801795,0.214368379079066,2.00628841614145,0.564751842617067,0.920650473014354,1.14579102687879,0.68741272937475,0,0.755393897389701,1.35004500046361,0.900642406448441,1.35942722695261,0,0.31136204275253,2.39414924040619,1.19513524027894,0.486213434136588,0.209613162627982,0,0.888986911206461,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,1.50901073108861,1.03005658216871,1.47257850531199,1.14870937911227,0.952587382566147,1.0429589335037,0.77163688185482,1.23625770240992,1.47198920134397,1.37147700954166,1.24233064311536,0.476872379894642,0.581385666529314,1.41164070622996,1.35383372626682,1.28049581010941,1.05227884575137,1.90125759384206,1.68342681497322,1.30498519936592,1.0835493061312,0.409231043169689,1.70430525304563,0.771626443924566,0.999242311751784,2.10538447600868,1.07435527024149,1.53030665655075,2.20591419119516,2.31867835620421
|short_description=p1@Calr3
}}

Revision as of 02:40, 4 August 2015

Short description:p1@Calr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Calr3_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 17bp_to_NM_028500, uc009mfx.1_5end
EntrezGene:73316
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p1@Calr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A340.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.67
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H18.82
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G5155.02
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E2135.09
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
male reproductive organ2.22e-0815
gonad9.64e-0818
gonad primordium9.64e-0818
testis1.17e-0714
external genitalia1.50e-0717
indifferent external genitalia1.50e-0717
indifferent gonad1.50e-0717
male organism1.99e-0716
male reproductive system1.99e-0716