FFCP PHASE1:Mm9::chr2:158186303..158186346,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=58|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:158186303..158186346,-|id=chr2:158186303..158186346,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000682,2.38e-23,3;CL:0000239,3.37e-20,6;CL:0000677,3.37e-20,6;CL:0000584,3.37e-20,6;CL:0000075,2.28e-17,7;CL:0000066,2.55e-14,25;CL:0002563,1.39e-13,9;CL:0002251,1.39e-13,9;CL:0000473,2.27e-10,7;CL:0002076,2.94e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!3.65e-11!24;UBERON:0001557!3.65e-11!24;UBERON:0001042!3.65e-11!24;UBERON:0008814!3.65e-11!24;UBERON:0009145!3.65e-11!24;UBERON:0002370!3.38e-10!23;UBERON:0000974!3.38e-10!23;UBERON:0004807!3.38e-10!23;UBERON:0005058!3.38e-10!23;UBERON:0003351!3.38e-10!23;UBERON:0009113!3.38e-10!23;UBERON:0003295!3.38e-10!23;UBERON:0009722!3.38e-10!23;UBERON:0005562!3.38e-10!23;UBERON:0007690!3.38e-10!23;UBERON:0003408!1.29e-09!24;UBERON:0000072!1.81e-09!27;UBERON:0000065!1.17e-07!41;UBERON:0003929!1.72e-07!55;UBERON:0001004!2.30e-07!42;UBERON:0004177!2.50e-07!29;UBERON:0002193!4.88e-07!48;UBERON:0005911!5.33e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.37e-23,15;UBERON:0001962,1.89e-15,2;UBERON:0001961,1.89e-15,2;UBERON:0001744,1.89e-15,2;UBERON:0004923,1.29e-14,24;UBERON:0001242,2.79e-14,13;UBERON:0001262,2.79e-14,13;UBERON:0004786,2.79e-14,13;UBERON:0003350,1.39e-13,9;UBERON:0004808,1.39e-13,9;UBERON:0001277,1.39e-13,9;UBERON:0000485,3.61e-11,11;UBERON:0002465,1.27e-10,3;UBERON:0003199,1.05e-08,1|phase1_expression=0,10.1202868215415,12.739978702907,0,0,3.69334398206158,4.20502753071946,0,0.281577444303333,0.234064526321993,0,0.239316476986009,0,0,0,0.202475267389826,0,0,0,0,0,0,0,2.71987118748791,4.35877634027623,12.0588712464154,9.90752591165872,11.4199753323521,0,0,3.54768817048488,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.77952493786677,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr2:158186303..158186346,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:158186303..158186346,- | |||
|description=CAGE_peak_at_chr2:158186303..158186346,- | |||
|id=chr2:158186303..158186346,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.38e-23,3;CL:0000239,3.37e-20,6;CL:0000677,3.37e-20,6;CL:0000584,3.37e-20,6;CL:0000075,2.28e-17,7;CL:0000066,2.55e-14,25;CL:0002563,1.39e-13,9;CL:0002251,1.39e-13,9;CL:0000473,2.27e-10,7;CL:0002076,2.94e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!3.65e-11!24;UBERON:0001557!3.65e-11!24;UBERON:0001042!3.65e-11!24;UBERON:0008814!3.65e-11!24;UBERON:0009145!3.65e-11!24;UBERON:0002370!3.38e-10!23;UBERON:0000974!3.38e-10!23;UBERON:0004807!3.38e-10!23;UBERON:0005058!3.38e-10!23;UBERON:0003351!3.38e-10!23;UBERON:0009113!3.38e-10!23;UBERON:0003295!3.38e-10!23;UBERON:0009722!3.38e-10!23;UBERON:0005562!3.38e-10!23;UBERON:0007690!3.38e-10!23;UBERON:0003408!1.29e-09!24;UBERON:0000072!1.81e-09!27;UBERON:0000065!1.17e-07!41;UBERON:0003929!1.72e-07!55;UBERON:0001004!2.30e-07!42;UBERON:0004177!2.50e-07!29;UBERON:0002193!4.88e-07!48;UBERON:0005911!5.33e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.37e-23,15;UBERON:0001962,1.89e-15,2;UBERON:0001961,1.89e-15,2;UBERON:0001744,1.89e-15,2;UBERON:0004923,1.29e-14,24;UBERON:0001242,2.79e-14,13;UBERON:0001262,2.79e-14,13;UBERON:0004786,2.79e-14,13;UBERON:0003350,1.39e-13,9;UBERON:0004808,1.39e-13,9;UBERON:0001277,1.39e-13,9;UBERON:0000485,3.61e-11,11;UBERON:0002465,1.27e-10,3;UBERON:0003199,1.05e-08,1 | |||
|phase1_expression=0,10.1202868215415,12.739978702907,0,0,3.69334398206158,4.20502753071946,0,0.281577444303333,0.234064526321993,0,0.239316476986009,0,0,0,0.202475267389826,0,0,0,0,0,0,0,2.71987118748791,4.35877634027623,12.0588712464154,9.90752591165872,11.4199753323521,0,0,3.54768817048488,0.635030673459631,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0.404810701674894,0,0,0,0,0,0,0,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0.102710957164827,0.77952493786677,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr2:158186303..158186346,- | |||
}} |
Latest revision as of 10:16, 4 August 2015
Short description: | p@chr2:158186303..158186346, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:158186303..158186346, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.38e-23 | 3 |
brush border epithelial cell | 3.37e-20 | 6 |
gut absorptive cell | 3.37e-20 | 6 |
enterocyte | 3.37e-20 | 6 |
columnar/cuboidal epithelial cell | 2.28e-17 | 7 |
epithelial cell | 2.55e-14 | 25 |
intestinal epithelial cell | 1.39e-13 | 9 |
epithelial cell of alimentary canal | 1.39e-13 | 9 |
defensive cell | 2.27e-10 | 7 |
endo-epithelial cell | 2.94e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.37e-23 | 15 |
gut-associated lymphoid tissue | 1.89e-15 | 2 |
mucosa-associated lymphoid tissue | 1.89e-15 | 2 |
lymphoid tissue | 1.89e-15 | 2 |
organ component layer | 1.29e-14 | 24 |
intestinal mucosa | 2.79e-14 | 13 |
wall of intestine | 2.79e-14 | 13 |
gastrointestinal system mucosa | 2.79e-14 | 13 |
epithelium of mucosa | 1.39e-13 | 9 |
gastrointestinal system epithelium | 1.39e-13 | 9 |
intestinal epithelium | 1.39e-13 | 9 |
simple columnar epithelium | 3.61e-11 | 11 |
lymphoid system | 1.27e-10 | 3 |
egg chamber | 1.05e-08 | 1 |