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FFCP PHASE1:Mm9::chr9:109735677..109735715,+: Difference between revisions

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{{FFCP|EntrezGene=54369|HGNC=|MCL_coexpression_id=3697|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143211_5end|description=CAGE_peak_3_at_Nme6_5end|id=chr9:109735677..109735715,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!9.98e-14!25;UBERON:0002330!9.98e-14!25;UBERON:0002107!3.70e-12!22;UBERON:0007499!3.70e-12!22;UBERON:0006925!3.70e-12!22;UBERON:0009497!3.70e-12!22;UBERON:0000015!3.70e-12!22;UBERON:0002423!3.70e-12!22;UBERON:0006235!3.70e-12!22;UBERON:0008835!3.70e-12!22;UBERON:0003894!3.70e-12!22;UBERON:0004161!3.70e-12!22;UBERON:0008836!3.70e-12!22;UBERON:0009854!6.51e-11!23;UBERON:0009856!6.51e-11!23;UBERON:0005172!8.20e-10!49;UBERON:0005173!8.20e-10!49;UBERON:0002417!8.20e-10!49;UBERON:0000916!8.20e-10!49;UBERON:0005177!4.85e-09!85;UBERON:0000466!4.75e-08!79;UBERON:0005256!1.40e-07!47;UBERON:0002100!1.51e-07!98;UBERON:0002108!1.76e-07!16;UBERON:0001264!3.90e-07!12;UBERON:0003922!3.90e-07!12;UBERON:0002114!3.90e-07!12;UBERON:0003923!3.90e-07!12;UBERON:0003924!3.90e-07!12;UBERON:0003921!3.90e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.34e-20,25;UBERON:0002330,3.34e-20,25;UBERON:0002107,6.86e-18,22;UBERON:0007499,6.86e-18,22;UBERON:0006925,6.86e-18,22;UBERON:0009497,6.86e-18,22;UBERON:0000015,6.86e-18,22;UBERON:0002423,6.86e-18,22;UBERON:0006235,6.86e-18,22;UBERON:0008835,6.86e-18,22;UBERON:0003894,6.86e-18,22;UBERON:0004161,6.86e-18,22;UBERON:0008836,6.86e-18,22;UBERON:0009854,1.00e-16,23;UBERON:0009856,1.00e-16,23;UBERON:0001264,8.10e-09,12;UBERON:0005256,8.31e-09,45;UBERON:0005177,3.51e-08,79;UBERON:0005172,1.64e-07,49;UBERON:0005173,1.64e-07,49;UBERON:0002417,1.64e-07,49;UBERON:0000916,1.64e-07,49;UBERON:0000949,4.19e-07,72;UBERON:0002100,6.66e-07,90|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,2.18243053485457,2.80335168714631,0,0,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.473193248037357,0.274228867211478,0.84877930359606,0.850432901510698,0.595745707205312,1.56719873483361,0.799962113967033,2.75291137280604,0.57423196411502,0.86152399231815,2.37018355954478,1.33016393619462,0.756090389279792,5.76499327703792,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,1.17646297606203,1.36609096991689,0,2.14024590558481,0.912392380975631,0.917733760808408,0,0.218025156380447,0.659058548203415,0.194429899074283,0.699932108126813,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0,0,0,0,2.03306719241479,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0.405017814995072,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0.395658863190582,0.182975287204819,0,0,0,0,0,0.427115042397309,0.186399445825301,0.151452386666368,0.226714680320357,0,17.2084775396277,22.4390540123558,29.6836755400799,13.6453047664011,1.79210754838934,2.80888840263504,1.70430322578058,1.29893002301434,2.12003744706204,0.14084341977668,0,0,0,0.432982082022428,0,0,2.39786147410026,0.517875767294343,0.148442139064825,0.693941307064543,0.608930956624282,2.99800146432876,0.452167921657868,0.587943535678524,0.376999773989026,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,1.27728527604296,0.958520996047362,2.39961092397363,0.635351135365324,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.162241263067758,0.407357455401265,0.995255764880744,4.80173241023982,0,0.650602214813519,0.459804208866946,0,1.20563854268572,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0,1.0447564995665,0.61734640922383,0.199034266818493,2.80885274925294,2.57347907114715,2.27330799516474,0.414251545071004,0,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,2.11560453330835,0.426576501070468,0.696710015581316,0.644337306610467,1.81515172161008,0.667134131534611,2.09248188723815,0,1.31759163779209,1.00534083520108,0,0.974820435595601,0.898819408654221,1.08069024937347,0.597423819763102,0.569003702859245,0.913988100877831,1.1270773567308,1.4255592949172,0.969762435838129,0.631222379012867,0.316182685621286,0.295220295959204,0.31399745568275,0.493588655687202,19.862326014839,2.66952169145751,3.34150291692445,4.72210436008193,8.11440485554012,12.5412123071257,29.2819729548633,18.1248566594011,2.2698931748505,24.1614043605512,4.31304619582064,11.5363693777236,16.5379966750717,13.3866805311969,32.1121370204223,5.30687873499704,0.369506380333209,1.51593129416388,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,1.50791283939272,1.08781136763742,10.3270497333998,6.07060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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:54369
|HGNC=
|MCL_coexpression_id=3697
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000143211_5end
|cluster_id=chr9:109735677..109735715,+
|description=CAGE_peak_3_at_Nme6_5end
|id=chr9:109735677..109735715,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!9.98e-14!25;UBERON:0002330!9.98e-14!25;UBERON:0002107!3.70e-12!22;UBERON:0007499!3.70e-12!22;UBERON:0006925!3.70e-12!22;UBERON:0009497!3.70e-12!22;UBERON:0000015!3.70e-12!22;UBERON:0002423!3.70e-12!22;UBERON:0006235!3.70e-12!22;UBERON:0008835!3.70e-12!22;UBERON:0003894!3.70e-12!22;UBERON:0004161!3.70e-12!22;UBERON:0008836!3.70e-12!22;UBERON:0009854!6.51e-11!23;UBERON:0009856!6.51e-11!23;UBERON:0005172!8.20e-10!49;UBERON:0005173!8.20e-10!49;UBERON:0002417!8.20e-10!49;UBERON:0000916!8.20e-10!49;UBERON:0005177!4.85e-09!85;UBERON:0000466!4.75e-08!79;UBERON:0005256!1.40e-07!47;UBERON:0002100!1.51e-07!98;UBERON:0002108!1.76e-07!16;UBERON:0001264!3.90e-07!12;UBERON:0003922!3.90e-07!12;UBERON:0002114!3.90e-07!12;UBERON:0003923!3.90e-07!12;UBERON:0003924!3.90e-07!12;UBERON:0003921!3.90e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.34e-20,25;UBERON:0002330,3.34e-20,25;UBERON:0002107,6.86e-18,22;UBERON:0007499,6.86e-18,22;UBERON:0006925,6.86e-18,22;UBERON:0009497,6.86e-18,22;UBERON:0000015,6.86e-18,22;UBERON:0002423,6.86e-18,22;UBERON:0006235,6.86e-18,22;UBERON:0008835,6.86e-18,22;UBERON:0003894,6.86e-18,22;UBERON:0004161,6.86e-18,22;UBERON:0008836,6.86e-18,22;UBERON:0009854,1.00e-16,23;UBERON:0009856,1.00e-16,23;UBERON:0001264,8.10e-09,12;UBERON:0005256,8.31e-09,45;UBERON:0005177,3.51e-08,79;UBERON:0005172,1.64e-07,49;UBERON:0005173,1.64e-07,49;UBERON:0002417,1.64e-07,49;UBERON:0000916,1.64e-07,49;UBERON:0000949,4.19e-07,72;UBERON:0002100,6.66e-07,90
|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,2.18243053485457,2.80335168714631,0,0,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.404950534779652,0,0.473193248037357,0.274228867211478,0.84877930359606,0.850432901510698,0.595745707205312,1.56719873483361,0.799962113967033,2.75291137280604,0.57423196411502,0.86152399231815,2.37018355954478,1.33016393619462,0.756090389279792,5.76499327703792,0,0.61506478758457,0,0,0.166234645358492,0,0,0,0,1.17646297606203,1.36609096991689,0,2.14024590558481,0.912392380975631,0.917733760808408,0,0.218025156380447,0.659058548203415,0.194429899074283,0.699932108126813,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,0,0,0,0,2.03306719241479,0,0.899899717281399,0,0.7104801149461,0.299600110518405,0,0.311068836925433,0.405017814995072,0,0.285650984403804,0.441737081903227,0.122490799214954,0.0958454710182364,0,0,0,0,0.395658863190582,0.182975287204819,0,0,0,0,0,0.427115042397309,0.186399445825301,0.151452386666368,0.226714680320357,0,17.2084775396277,22.4390540123558,29.6836755400799,13.6453047664011,1.79210754838934,2.80888840263504,1.70430322578058,1.29893002301434,2.12003744706204,0.14084341977668,0,0,0,0.432982082022428,0,0,2.39786147410026,0.517875767294343,0.148442139064825,0.693941307064543,0.608930956624282,2.99800146432876,0.452167921657868,0.587943535678524,0.376999773989026,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0,1.27728527604296,0.958520996047362,2.39961092397363,0.635351135365324,0.149790639404823,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.162241263067758,0.407357455401265,0.995255764880744,4.80173241023982,0,0.650602214813519,0.459804208866946,0,1.20563854268572,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0.567318240503458,0.703804496655795,0.219195732427575,0,1.0447564995665,0.61734640922383,0.199034266818493,2.80885274925294,2.57347907114715,2.27330799516474,0.414251545071004,0,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0,0.268273401399619,0.233530684734339,0,0.164167464079095,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0.330418782983798,2.11560453330835,0.426576501070468,0.696710015581316,0.644337306610467,1.81515172161008,0.667134131534611,2.09248188723815,0,1.31759163779209,1.00534083520108,0,0.974820435595601,0.898819408654221,1.08069024937347,0.597423819763102,0.569003702859245,0.913988100877831,1.1270773567308,1.4255592949172,0.969762435838129,0.631222379012867,0.316182685621286,0.295220295959204,0.31399745568275,0.493588655687202,19.862326014839,2.66952169145751,3.34150291692445,4.72210436008193,8.11440485554012,12.5412123071257,29.2819729548633,18.1248566594011,2.2698931748505,24.1614043605512,4.31304619582064,11.5363693777236,16.5379966750717,13.3866805311969,32.1121370204223,5.30687873499704,0.369506380333209,1.51593129416388,0.651859905768103,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,1.50791283939272,1.08781136763742,10.3270497333998,6.07060841870411,0,0,0,0.252470927204373,0.94652465824877,0.780877488593277,0.861693590931196,0.238968797952552,0,0.283076530788832,1.21443210502468,0.584511715822624,0,0,1.27746076687442,0.35613120733451,0.325773918707152,2.14461159864296,6.63725691699814,0.728341908464944,3.02323556964751,14.3339860614483,15.9463022155617,13.8345816574767,1.29214146584111,4.72593848320757,3.56497378384721,6.63677191665214,14.7586052004998,16.5016869197099,0,0,0.129358683782755,0.857348140126369,0.177340233642274,0.178368817602071,0,0.304464949114599,0.938686832254841,1.0591603543191,13.0111754852428,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.512612642393558,1.44470807574256,0.370389054739423,0.565105371014073,0.136694227721025,0.228778173206523,0,0.419854356970974,0.552799895217695,0,0.790839983952838,1.21991680276109,1.29606408986162,1.25452977608681,1.09181281873089,2.29269388854195,1.81837602595739,0.785267825952089,0.388844919875379,2.4853572523477,0,0.448549638131936,0.496375471371293,0.194451188344048,0.258319646955462,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0,0,0.316011120628178,2.02725215290164,0.410843828659309,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0.0962118416403295,0,0.226730383615211,0,0.269141569828427,0.167884616364078,0.19318959403219,6.56888664079137,1.09890974560359,0.428736758158132,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0,0.682934423016537,0.972426868273176,2.93458427679175,4.77993121970037,2.66696073361938,2.47242068686673,2.56735367673452,3.03236654116557,5.83002389747551,1.50901073108861,2.34103768674706,3.3293079250532,3.0440798546475,1.42888107384922,1.73826488917283,1.54327376370964,2.06042950401653,2.35518272215036,5.82877729055206,2.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|short_description=p3@Nme6
}}

Revision as of 14:32, 4 August 2015

Short description:p3@Nme6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nme6_5end
Coexpression cluster:MCL_coexpression_mm9:3697
Association with transcript: 0bp_to_ENSMUST00000143211_5end
EntrezGene:54369
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Nme6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C422.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.68
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B219.86
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D78.11
liver, embryo E16.CNhs10523.462-17F512.54
liver, embryo E17.CNhs10510.481-18A329.28
liver, embryo E18.CNhs10579.499-43G418.12
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G224.16
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A313.39
liver, neonate N25.CNhs11198.1368-26H132.11
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E514.33
pancreas, embryo E17.CNhs10599.1558-45G315.95
pancreas, embryo E18.CNhs10580.1535-43I713.83
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B66.64
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F813.01
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland3.34e-2025
exocrine system3.34e-2025
liver6.86e-1822
epithelial sac6.86e-1822
digestive gland6.86e-1822
epithelium of foregut-midgut junction6.86e-1822
anatomical boundary6.86e-1822
hepatobiliary system6.86e-1822
foregut-midgut junction6.86e-1822
hepatic diverticulum6.86e-1822
liver primordium6.86e-1822
septum transversum6.86e-1822
liver bud6.86e-1822
digestive tract diverticulum1.00e-1623
sac1.00e-1623
pancreas8.10e-0912
trunk mesenchyme8.31e-0945
trunk region element3.51e-0879
abdomen element1.64e-0749
abdominal segment element1.64e-0749
abdominal segment of trunk1.64e-0749
abdomen1.64e-0749
endocrine system4.19e-0772
trunk6.66e-0790
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