FFCP PHASE1:Mm9::chr17:31579883..31579898,+: Difference between revisions
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{{FFCP|EntrezGene=18585|HGNC=|MCL_coexpression_id=457|UniProt=|association_with_transcript=6bp_to_ENSMUST00000130547_5end|description=CAGE_peak_5_at_Pde9a_5end|id=chr17:31579883..31579898,+|ontology_enrichment_celltype=CL:0000239!2.78e-10!6;CL:0000677!2.78e-10!6;CL:0000212!2.78e-10!6;CL:0000584!2.78e-10!6;CL:0000075!9.48e-09!7;CL:0000473!1.35e-08!3;CL:0000627!1.35e-08!3;CL:0000682!1.35e-08!3|ontology_enrichment_celltype_v019_2=CL:0000682,4.11e-16,3;CL:0000239,1.12e-13,6;CL:0000677,1.12e-13,6;CL:0000584,1.12e-13,6;CL:0000075,9.44e-12,7;CL:0000066,2.73e-09,25;CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9;CL:0000473,3.48e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.12e-15!43;UBERON:0000344!5.83e-15!15;UBERON:0005409!1.51e-11!59;UBERON:0001242!3.55e-11!13;UBERON:0000060!3.55e-11!13;UBERON:0001262!3.55e-11!13;UBERON:0004786!3.55e-11!13;UBERON:0004923!2.72e-10!24;UBERON:0000331!2.78e-08!3;UBERON:0002116!2.78e-08!3;UBERON:0001204!2.78e-08!3;UBERON:0001168!2.78e-08!3|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-20,15;UBERON:0000160,7.98e-18,31;UBERON:0001242,7.59e-14,13;UBERON:0001262,7.59e-14,13;UBERON:0004786,7.59e-14,13;UBERON:0005409,2.02e-13,47;UBERON:0004923,1.33e-12,24;UBERON:0001962,9.72e-11,2;UBERON:0001961,9.72e-11,2;UBERON:0001744,9.72e-11,2;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0000331,4.50e-08,3;UBERON:0002116,4.50e-08,3;UBERON:0001204,4.50e-08,3;UBERON:0001168,4.50e-08,3;UBERON:0000485,1.56e-07,11;UBERON:0002465,1.92e-07,3|phase1_expression=0,3.48975407639361,5.91499011206397,2.41971369045464,2.00358291978539,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,4.12936705920906,2.8711598205751,13.7843838770904,4.30942465371778,15.771943814879,0.252030129759931,43.2374495777844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.760902504450237,0,1.15289268306808,1.75934646160189,1.39269530428806,2.53453313254856,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0|short_description=p5@Pde9a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18585 | |||
|HGNC= | |||
|MCL_coexpression_id=457 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENSMUST00000130547_5end | |||
|cluster_id=chr17:31579883..31579898,+ | |||
|description=CAGE_peak_5_at_Pde9a_5end | |||
|id=chr17:31579883..31579898,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.78e-10!6;CL:0000677!2.78e-10!6;CL:0000212!2.78e-10!6;CL:0000584!2.78e-10!6;CL:0000075!9.48e-09!7;CL:0000473!1.35e-08!3;CL:0000627!1.35e-08!3;CL:0000682!1.35e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.11e-16,3;CL:0000239,1.12e-13,6;CL:0000677,1.12e-13,6;CL:0000584,1.12e-13,6;CL:0000075,9.44e-12,7;CL:0000066,2.73e-09,25;CL:0002563,3.54e-09,9;CL:0002251,3.54e-09,9;CL:0000473,3.48e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.12e-15!43;UBERON:0000344!5.83e-15!15;UBERON:0005409!1.51e-11!59;UBERON:0001242!3.55e-11!13;UBERON:0000060!3.55e-11!13;UBERON:0001262!3.55e-11!13;UBERON:0004786!3.55e-11!13;UBERON:0004923!2.72e-10!24;UBERON:0000331!2.78e-08!3;UBERON:0002116!2.78e-08!3;UBERON:0001204!2.78e-08!3;UBERON:0001168!2.78e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-20,15;UBERON:0000160,7.98e-18,31;UBERON:0001242,7.59e-14,13;UBERON:0001262,7.59e-14,13;UBERON:0004786,7.59e-14,13;UBERON:0005409,2.02e-13,47;UBERON:0004923,1.33e-12,24;UBERON:0001962,9.72e-11,2;UBERON:0001961,9.72e-11,2;UBERON:0001744,9.72e-11,2;UBERON:0003350,3.54e-09,9;UBERON:0004808,3.54e-09,9;UBERON:0001277,3.54e-09,9;UBERON:0000331,4.50e-08,3;UBERON:0002116,4.50e-08,3;UBERON:0001204,4.50e-08,3;UBERON:0001168,4.50e-08,3;UBERON:0000485,1.56e-07,11;UBERON:0002465,1.92e-07,3 | |||
|phase1_expression=0,3.48975407639361,5.91499011206397,2.41971369045464,2.00358291978539,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,4.12936705920906,2.8711598205751,13.7843838770904,4.30942465371778,15.771943814879,0.252030129759931,43.2374495777844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0.760902504450237,0,1.15289268306808,1.75934646160189,1.39269530428806,2.53453313254856,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0,0.0603129249281559,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |||
|short_description=p5@Pde9a | |||
}} |
Revision as of 14:43, 4 August 2015
Short description: | p5@Pde9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pde9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | 6bp_to_ENSMUST00000130547_5end |
EntrezGene: | 18585 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.11e-16 | 3 |
brush border epithelial cell | 1.12e-13 | 6 |
gut absorptive cell | 1.12e-13 | 6 |
enterocyte | 1.12e-13 | 6 |
columnar/cuboidal epithelial cell | 9.44e-12 | 7 |
epithelial cell | 2.73e-09 | 25 |
intestinal epithelial cell | 3.54e-09 | 9 |
epithelial cell of alimentary canal | 3.54e-09 | 9 |
defensive cell | 3.48e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.01e-20 | 15 |
intestine | 7.98e-18 | 31 |
intestinal mucosa | 7.59e-14 | 13 |
wall of intestine | 7.59e-14 | 13 |
gastrointestinal system mucosa | 7.59e-14 | 13 |
gastrointestinal system | 2.02e-13 | 47 |
organ component layer | 1.33e-12 | 24 |
gut-associated lymphoid tissue | 9.72e-11 | 2 |
mucosa-associated lymphoid tissue | 9.72e-11 | 2 |
lymphoid tissue | 9.72e-11 | 2 |
epithelium of mucosa | 3.54e-09 | 9 |
gastrointestinal system epithelium | 3.54e-09 | 9 |
intestinal epithelium | 3.54e-09 | 9 |
ileal mucosa | 4.50e-08 | 3 |
ileum | 4.50e-08 | 3 |
mucosa of small intestine | 4.50e-08 | 3 |
wall of small intestine | 4.50e-08 | 3 |
simple columnar epithelium | 1.56e-07 | 11 |
lymphoid system | 1.92e-07 | 3 |