FFCP PHASE1:Mm9::chr4:132121275..132121283,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1054|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:132121275..132121283,+|id=chr4:132121275..132121283,+|ontology_enrichment_celltype=CL:0000239!1.26e-07!6;CL:0000677!1.26e-07!6;CL:0000212!1.26e-07!6;CL:0000584!1.26e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,4.42e-10,6;CL:0000677,4.42e-10,6;CL:0000584,4.42e-10,6;CL:0000075,1.02e-08,7;CL:0002563,6.87e-07,9;CL:0002251,6.87e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.84e-24!43;UBERON:0005409!1.67e-19!59;UBERON:0000344!2.43e-10!15;UBERON:0001007!8.12e-08!128;UBERON:0001555!8.12e-08!128;UBERON:0007026!8.12e-08!128;UBERON:0004119!1.30e-07!130;UBERON:0000925!1.30e-07!130;UBERON:0006595!1.30e-07!130;UBERON:0001242!4.25e-07!13;UBERON:0000060!4.25e-07!13;UBERON:0001262!4.25e-07!13;UBERON:0004786!4.25e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.81e-33,31;UBERON:0005409,2.50e-21,47;UBERON:0001242,3.80e-08,13;UBERON:0001262,3.80e-08,13;UBERON:0004786,3.80e-08,13;UBERON:0004921,5.87e-08,114;UBERON:0001007,8.57e-08,116;UBERON:0001555,8.57e-08,116;UBERON:0007026,8.57e-08,116;UBERON:0004119,1.23e-07,118;UBERON:0000925,1.23e-07,118;UBERON:0006595,1.23e-07,118;UBERON:0000344,4.39e-07,15;UBERON:0003350,6.87e-07,9;UBERON:0004808,6.87e-07,9;UBERON:0001277,6.87e-07,9|phase1_expression=0,1.74487703819681,0.454999239389536,1.51232105653415,2.50447864973174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,2.8711598205751,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,5.28901133327089,0,0,0,0.403367049246685,1.55664630691409,2.28270751335071,0.949058123089023,0.658795818896044,1.75934646160189,0.994782360205754,1.55971269695296,0.898819408654221,1.72910439899755,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr4:132121275..132121283,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1054 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:132121275..132121283,+ | |||
|description=CAGE_peak_at_chr4:132121275..132121283,+ | |||
|id=chr4:132121275..132121283,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.26e-07!6;CL:0000677!1.26e-07!6;CL:0000212!1.26e-07!6;CL:0000584!1.26e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.42e-10,6;CL:0000677,4.42e-10,6;CL:0000584,4.42e-10,6;CL:0000075,1.02e-08,7;CL:0002563,6.87e-07,9;CL:0002251,6.87e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.84e-24!43;UBERON:0005409!1.67e-19!59;UBERON:0000344!2.43e-10!15;UBERON:0001007!8.12e-08!128;UBERON:0001555!8.12e-08!128;UBERON:0007026!8.12e-08!128;UBERON:0004119!1.30e-07!130;UBERON:0000925!1.30e-07!130;UBERON:0006595!1.30e-07!130;UBERON:0001242!4.25e-07!13;UBERON:0000060!4.25e-07!13;UBERON:0001262!4.25e-07!13;UBERON:0004786!4.25e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.81e-33,31;UBERON:0005409,2.50e-21,47;UBERON:0001242,3.80e-08,13;UBERON:0001262,3.80e-08,13;UBERON:0004786,3.80e-08,13;UBERON:0004921,5.87e-08,114;UBERON:0001007,8.57e-08,116;UBERON:0001555,8.57e-08,116;UBERON:0007026,8.57e-08,116;UBERON:0004119,1.23e-07,118;UBERON:0000925,1.23e-07,118;UBERON:0006595,1.23e-07,118;UBERON:0000344,4.39e-07,15;UBERON:0003350,6.87e-07,9;UBERON:0004808,6.87e-07,9;UBERON:0001277,6.87e-07,9 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,1.51232105653415,2.50447864973174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.22940928106717,2.8711598205751,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96502539580558,5.28901133327089,0,0,0,0.403367049246685,1.55664630691409,2.28270751335071,0.949058123089023,0.658795818896044,1.75934646160189,0.994782360205754,1.55971269695296,0.898819408654221,1.72910439899755,1.39398891278057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr4:132121275..132121283,+ | |||
}} |
Latest revision as of 21:00, 4 August 2015
Short description: | p@chr4:132121275..132121283, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:132121275..132121283, + |
Coexpression cluster: | MCL_coexpression_mm9:1054 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.42e-10 | 6 |
gut absorptive cell | 4.42e-10 | 6 |
enterocyte | 4.42e-10 | 6 |
columnar/cuboidal epithelial cell | 1.02e-08 | 7 |
intestinal epithelial cell | 6.87e-07 | 9 |
epithelial cell of alimentary canal | 6.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.81e-33 | 31 |
gastrointestinal system | 2.50e-21 | 47 |
intestinal mucosa | 3.80e-08 | 13 |
wall of intestine | 3.80e-08 | 13 |
gastrointestinal system mucosa | 3.80e-08 | 13 |
subdivision of digestive tract | 5.87e-08 | 114 |
digestive system | 8.57e-08 | 116 |
digestive tract | 8.57e-08 | 116 |
primitive gut | 8.57e-08 | 116 |
endoderm-derived structure | 1.23e-07 | 118 |
endoderm | 1.23e-07 | 118 |
presumptive endoderm | 1.23e-07 | 118 |
mucosa | 4.39e-07 | 15 |
epithelium of mucosa | 6.87e-07 | 9 |
gastrointestinal system epithelium | 6.87e-07 | 9 |
intestinal epithelium | 6.87e-07 | 9 |