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FFCP PHASE1:Mm9::chr4:134323855..134323925,-: Difference between revisions

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{{FFCP|EntrezGene=100017|HGNC=|UniProt=Q8C142|association_with_transcript=0bp_to_NM_145554,uc012dmx.1_5end|description=CAGE_peak_1_at_Ldlrap1_5end|id=chr4:134323855..134323925,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.98e-16!193;UBERON:0004120!4.98e-16!193;UBERON:0006603!4.98e-16!193;UBERON:0009569!9.51e-14!66;UBERON:0003104!3.27e-12!131;UBERON:0009142!3.27e-12!131;UBERON:0002100!3.34e-10!98;UBERON:0005172!3.77e-10!49;UBERON:0005173!3.77e-10!49;UBERON:0002417!3.77e-10!49;UBERON:0000916!3.77e-10!49;UBERON:0005256!3.89e-10!47;UBERON:0005177!3.20e-09!85;UBERON:0000077!4.84e-08!97;UBERON:0002405!5.81e-08!70;UBERON:0002365!6.52e-08!25;UBERON:0002330!6.52e-08!25;UBERON:0002107!9.18e-08!22;UBERON:0007499!9.18e-08!22;UBERON:0006925!9.18e-08!22;UBERON:0009497!9.18e-08!22;UBERON:0000015!9.18e-08!22;UBERON:0002423!9.18e-08!22;UBERON:0006235!9.18e-08!22;UBERON:0008835!9.18e-08!22;UBERON:0003894!9.18e-08!22;UBERON:0004161!9.18e-08!22;UBERON:0008836!9.18e-08!22;UBERON:0001041!5.22e-07!92;UBERON:0009854!5.25e-07!23;UBERON:0009856!5.25e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0009569,9.50e-14,66;UBERON:0002100,2.73e-13,90;UBERON:0005177,5.44e-12,79;UBERON:0003104,3.24e-11,61;UBERON:0009142,3.24e-11,61;UBERON:0005256,1.06e-10,45;UBERON:0005172,3.77e-10,49;UBERON:0005173,3.77e-10,49;UBERON:0002417,3.77e-10,49;UBERON:0000916,3.77e-10,49;UBERON:0001041,5.18e-08,80;UBERON:0002365,6.52e-08,25;UBERON:0002330,6.52e-08,25;UBERON:0002107,9.18e-08,22;UBERON:0007499,9.18e-08,22;UBERON:0006925,9.18e-08,22;UBERON:0009497,9.18e-08,22;UBERON:0000015,9.18e-08,22;UBERON:0002423,9.18e-08,22;UBERON:0006235,9.18e-08,22;UBERON:0008835,9.18e-08,22;UBERON:0003894,9.18e-08,22;UBERON:0004161,9.18e-08,22;UBERON:0008836,9.18e-08,22;UBERON:0009854,5.25e-07,23;UBERON:0009856,5.25e-07,23|phase1_expression=9.92922852049723,9.07336059862339,14.5599756604652,9.37639055051173,9.01612313903425,6.37941233265181,4.67225281191051,20.4014851037691,14.6420271037733,11.7032263160997,4.45166717386313,2.6324812468461,38.6913649644525,37.7656138450069,22.3183540416494,25.1069331563384,37.7763414189199,9.93705820878449,9.46089591879598,10.6097412949508,8.58937230525805,2.97872853602656,0.783599367416806,4.95976510659561,5.73523202667925,16.0784949952206,7.75371593086335,6.46413698057667,5.70070258369122,5.54466285471848,4.6563407237614,76.2036808151557,63.9667379087953,31.6963362030877,3.17736781726402,2.82598897109437,6.32925004413344,36.412251874111,26.5654017138092,34.0290433582969,42.940898626264,43.0318655523821,49.0365456561465,5.91715044485213,5.27160042341476,5.87349606917381,21.9069576417451,2.39827672018491,5.93152693383074,5.8328969722285,5.17949760013841,1.43752564364972,9.56360854529097,44.247090662692,37.642505503956,21.6097926270195,22.9226751951005,29.3933092598142,1.21389876515759,0.528990979272033,0.633831403506179,12.5372476865579,15.1180115338894,63.4429300683386,88.0091062684607,83.1261734486937,34.4540127096165,21.5162250980071,1.14058573539325,0.945041568321835,1.26194976810829,5.99867067247988,5.07997644188711,0.367472397644862,0.862609239164127,1.83843757322004,4.40463523997555,3.83062014255563,5.06901559745603,0.527545150920775,0.731901148819277,2.6045668527838,9.77140496504833,2.8138130501584,5.34793867218835,1.17851434189467,2.42031857358475,1.86399445825301,4.84647637332378,4.30757892608677,20.0006497204158,18.0689014166091,44.1981366910038,23.746940432064,19.4932925234301,19.7131830322828,12.0782201313307,11.930122580464,8.57293815189467,13.7802434059033,9.15482228548423,11.5493829672886,43.3168907501298,28.4426681261332,26.6283980443793,24.8292668165597,27.2983200307983,12.5602267690966,12.9468941823586,24.0476265285016,18.9099006175088,35.9269264408327,34.8229400856648,31.953199797156,23.0473865985981,20.6093209780668,21.2587672251562,9.39895819979426,29.1921482143459,18.1178871941098,19.2132121060542,21.3345111379498,5.59175283654366,13.4679166625312,28.2753054198164,10.9846533739694,10.543730956521,8.99854096490112,11.3092502095028,2.54644086988199,2.28750301409313,0.251308704225729,1.56441888173049,3.83573185995496,4.57133698031032,5.19172041816825,12.0170449343373,19.1586734739543,7.07623723614289,10.5220927943237,5.33493816147085,6.89706313300419,5.76198815377118,4.9732589885786,5.51095643125756,6.66191345481219,5.80950692270319,9.8307280880826,6.89817577385095,8.50977360755187,10.7330185740009,12.4941567483718,13.3462679628287,13.9300866608867,14.1989674121481,8.55847347319521,9.83098462238529,11.5806558201622,17.9023004619223,7.04227626620706,6.0976775595085,6.84235833551856,8.99629995223799,6.68998387941173,7.25055430570678,6.0458825635106,10.4626626545851,10.5088808130453,12.5065485934245,13.2975645904067,13.9438352418872,12.4269989311532,15.8076083009556,18.9231050452124,1.26173969138476,2.57261530948211,15.8601015832223,6.08236303326152,6.18535926552179,5.34144345279009,9.2784572151907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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:100017
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8C142
|association_with_transcript=0bp_to_NM_145554,uc012dmx.1_5end
|cluster_id=chr4:134323855..134323925,-
|description=CAGE_peak_1_at_Ldlrap1_5end
|id=chr4:134323855..134323925,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!4.98e-16!193;UBERON:0004120!4.98e-16!193;UBERON:0006603!4.98e-16!193;UBERON:0009569!9.51e-14!66;UBERON:0003104!3.27e-12!131;UBERON:0009142!3.27e-12!131;UBERON:0002100!3.34e-10!98;UBERON:0005172!3.77e-10!49;UBERON:0005173!3.77e-10!49;UBERON:0002417!3.77e-10!49;UBERON:0000916!3.77e-10!49;UBERON:0005256!3.89e-10!47;UBERON:0005177!3.20e-09!85;UBERON:0000077!4.84e-08!97;UBERON:0002405!5.81e-08!70;UBERON:0002365!6.52e-08!25;UBERON:0002330!6.52e-08!25;UBERON:0002107!9.18e-08!22;UBERON:0007499!9.18e-08!22;UBERON:0006925!9.18e-08!22;UBERON:0009497!9.18e-08!22;UBERON:0000015!9.18e-08!22;UBERON:0002423!9.18e-08!22;UBERON:0006235!9.18e-08!22;UBERON:0008835!9.18e-08!22;UBERON:0003894!9.18e-08!22;UBERON:0004161!9.18e-08!22;UBERON:0008836!9.18e-08!22;UBERON:0001041!5.22e-07!92;UBERON:0009854!5.25e-07!23;UBERON:0009856!5.25e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0009569,9.50e-14,66;UBERON:0002100,2.73e-13,90;UBERON:0005177,5.44e-12,79;UBERON:0003104,3.24e-11,61;UBERON:0009142,3.24e-11,61;UBERON:0005256,1.06e-10,45;UBERON:0005172,3.77e-10,49;UBERON:0005173,3.77e-10,49;UBERON:0002417,3.77e-10,49;UBERON:0000916,3.77e-10,49;UBERON:0001041,5.18e-08,80;UBERON:0002365,6.52e-08,25;UBERON:0002330,6.52e-08,25;UBERON:0002107,9.18e-08,22;UBERON:0007499,9.18e-08,22;UBERON:0006925,9.18e-08,22;UBERON:0009497,9.18e-08,22;UBERON:0000015,9.18e-08,22;UBERON:0002423,9.18e-08,22;UBERON:0006235,9.18e-08,22;UBERON:0008835,9.18e-08,22;UBERON:0003894,9.18e-08,22;UBERON:0004161,9.18e-08,22;UBERON:0008836,9.18e-08,22;UBERON:0009854,5.25e-07,23;UBERON:0009856,5.25e-07,23
|phase1_expression=9.92922852049723,9.07336059862339,14.5599756604652,9.37639055051173,9.01612313903425,6.37941233265181,4.67225281191051,20.4014851037691,14.6420271037733,11.7032263160997,4.45166717386313,2.6324812468461,38.6913649644525,37.7656138450069,22.3183540416494,25.1069331563384,37.7763414189199,9.93705820878449,9.46089591879598,10.6097412949508,8.58937230525805,2.97872853602656,0.783599367416806,4.95976510659561,5.73523202667925,16.0784949952206,7.75371593086335,6.46413698057667,5.70070258369122,5.54466285471848,4.6563407237614,76.2036808151557,63.9667379087953,31.6963362030877,3.17736781726402,2.82598897109437,6.32925004413344,36.412251874111,26.5654017138092,34.0290433582969,42.940898626264,43.0318655523821,49.0365456561465,5.91715044485213,5.27160042341476,5.87349606917381,21.9069576417451,2.39827672018491,5.93152693383074,5.8328969722285,5.17949760013841,1.43752564364972,9.56360854529097,44.247090662692,37.642505503956,21.6097926270195,22.9226751951005,29.3933092598142,1.21389876515759,0.528990979272033,0.633831403506179,12.5372476865579,15.1180115338894,63.4429300683386,88.0091062684607,83.1261734486937,34.4540127096165,21.5162250980071,1.14058573539325,0.945041568321835,1.26194976810829,5.99867067247988,5.07997644188711,0.367472397644862,0.862609239164127,1.83843757322004,4.40463523997555,3.83062014255563,5.06901559745603,0.527545150920775,0.731901148819277,2.6045668527838,9.77140496504833,2.8138130501584,5.34793867218835,1.17851434189467,2.42031857358475,1.86399445825301,4.84647637332378,4.30757892608677,20.0006497204158,18.0689014166091,44.1981366910038,23.746940432064,19.4932925234301,19.7131830322828,12.0782201313307,11.930122580464,8.57293815189467,13.7802434059033,9.15482228548423,11.5493829672886,43.3168907501298,28.4426681261332,26.6283980443793,24.8292668165597,27.2983200307983,12.5602267690966,12.9468941823586,24.0476265285016,18.9099006175088,35.9269264408327,34.8229400856648,31.953199797156,23.0473865985981,20.6093209780668,21.2587672251562,9.39895819979426,29.1921482143459,18.1178871941098,19.2132121060542,21.3345111379498,5.59175283654366,13.4679166625312,28.2753054198164,10.9846533739694,10.543730956521,8.99854096490112,11.3092502095028,2.54644086988199,2.28750301409313,0.251308704225729,1.56441888173049,3.83573185995496,4.57133698031032,5.19172041816825,12.0170449343373,19.1586734739543,7.07623723614289,10.5220927943237,5.33493816147085,6.89706313300419,5.76198815377118,4.9732589885786,5.51095643125756,6.66191345481219,5.80950692270319,9.8307280880826,6.89817577385095,8.50977360755187,10.7330185740009,12.4941567483718,13.3462679628287,13.9300866608867,14.1989674121481,8.55847347319521,9.83098462238529,11.5806558201622,17.9023004619223,7.04227626620706,6.0976775595085,6.84235833551856,8.99629995223799,6.68998387941173,7.25055430570678,6.0458825635106,10.4626626545851,10.5088808130453,12.5065485934245,13.2975645904067,13.9438352418872,12.4269989311532,15.8076083009556,18.9231050452124,1.26173969138476,2.57261530948211,15.8601015832223,6.08236303326152,6.18535926552179,5.34144345279009,9.27845721519072,5.84882221407693,6.0042071838115,9.3210556795154,10.4396393539793,10.8701310117847,9.29940272560997,9.35095418593409,12.0877734013854,8.98819408654222,6.91641759599022,11.3510525754989,9.10405924574792,7.19765629441292,12.3978509240388,9.36796108088446,9.69762435838129,15.1493370963088,18.5915419145316,16.2371162777562,16.0138702398202,17.5223972768957,19.5658733877518,16.1839752544611,16.5109555895091,16.864658428864,19.2717115319078,26.2883104130134,18.0784354764808,18.9879450717535,17.9970101720289,17.2973690308491,14.3768206527355,21.2120340171047,24.0269008298212,22.9846778931872,23.1422663443267,30.8763853672555,20.1380977281599,8.14813070613084,7.49638891633319,8.82674446030978,11.0304416695596,14.9080569123216,17.853273066451,25.9527751650872,17.8127712839996,19.2674279994434,28.5424035896902,25.8904037250866,27.1115421529456,32.5460381808401,28.6503439484617,23.3879444042045,16.7199852826472,12.417153583713,7.86697890940181,14.1826140776566,3.27869890753351,16.1581393410799,1.89304931649754,1.95219372148319,4.09304455692318,1.91175038362042,3.56477878531831,2.83076530788832,0.404810701674894,2.92255857911312,3.16230222357219,2.24924921495265,7.94864477166304,10.1497394090335,10.750539317336,9.07335676348945,9.2921596837974,10.4395673546642,8.76738315197778,8.29862350925952,8.85905678642318,7.99331384654211,13.6966995379157,9.81541069589265,19.6073558111597,9.16506598013866,13.7044191147498,9.28219889233682,7.48967132658334,7.0223826672211,10.6074120701859,9.85950361145325,9.04435191575595,10.7021290561242,10.86023535974,10.9607381681256,24.1711859305622,34.7404596216665,10.1443063105282,26.2169142176953,25.3499149912572,20.1445169260041,23.2776070806116,22.1590214655833,12.5336759750836,10.5692422145991,18.6249260069659,9.28740905834501,13.7043950253587,23.7344255825911,20.5041341581538,18.7598102029349,18.6976272993241,20.2929605869304,21.0063960182724,8.59203556213602,6.32671987162271,9.96265388921559,10.0444966964275,11.9180328728247,14.1935666435015,9.17077555416781,15.5388496763632,15.4436005770577,11.5357326229696,14.2908042009993,5.07323644815771,11.2137409532984,9.43113395605456,14.9727415024917,15.2408591703723,9.46154302748358,14.4349403534277,9.63512447845231,7.13043542094834,4.83168241652012,2.88030006257865,10.4283669807299,17.231643299664,12.6334477312738,6.75588279484534,7.34009452236674,7.15252877212554,6.49055427407832,7.53216588590344,6.15895344683701,6.93481940560499,6.85618058930516,6.72459377104292,8.27421838106833,10.7526750007043,14.964205318604,59.2702495508753,61.5437056341003,63.9640388347139,18.3530114330581,13.5131382324851,12.454310450174,17.7925754635625,8.52672576860118,1.12950368523413,1.84130094602871,2.29158205375759,1.54667864109319,2.74033007908257,0.755393897389701,0.675022500231806,1.80128481289688,1.35942722695261,0.51776031175182,5.50072942196136,5.58634822761443,8.02447947044431,8.265628380322,12.5767897576789,12.869045591501,10.4455962066759,9.88968274746692,9.62757628775446,9.6024940470243,8.11133759648767,10.3744487762342,12.2670374785546,11.9086783473057,12.4060612944125,10.4784612082276,14.0220034393275,10.6100071255038,9.89006161927936,12.217510371155,12.343293085875,9.22874192028555,12.8755542571553,9.44751708110135,10.257922465271,9.13837765230106,12.2561741824758,9.73357932320019,10.5927208799772,7.85599180320834,11.5075967580449,14.0861409797056,16.3692417267876,10.2258315182738,10.9956768259251,11.7410971630835,15.6734177658424,15.0409737833809,16.4507965579205,19.6326363016369,14.839541479707
|short_description=p1@Ldlrap1
}}

Revision as of 22:49, 4 August 2015

Short description:p1@Ldlrap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ldlrap1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_145554, uc012dmx.1_5end
EntrezGene:100017
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ldlrap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E438.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E837.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A122.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A325.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.46
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I376.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G663.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G836.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G942.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H243.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H449.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.27
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.87
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I944.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A137.64
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.39
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C612.54
Mouse Meningeal cells, donor3.CNhs12109.11639-122D115.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C763.44
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E788.01
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D283.13
Mouse Microglia, donor1.CNhs12629.11718-123C834.45
Mouse Microglia, donor2.CNhs12634.11736-123E821.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D94.85
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.07
Mouse hepatocyte, donor1.CNhs13078.11714-123C444.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C823.75
Mouse hepatocyte, donor6.CNhs13090.11822-124F419.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.71
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.78
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G327.30
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.56
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D724.05
adrenal gland, embryo E14.CNhs11038.406-44C518.91
adrenal gland, embryo E16.CNhs11004.1254-43D635.93
adrenal gland, embryo E17.CNhs11043.1263-45I134.82
adrenal gland, embryo E18.CNhs11026.1262-18F531.95
adrenal gland, neonate N00.CNhs11191.1311-23C123.05
adrenal gland, neonate N25.CNhs11223.1377-27I320.61
amnion, adult pregnant day17.5.CNhs10488.583-22A821.26
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G229.19
bone (os femoris), neonate N02.CNhs11227.1985-43F518.12
bone (os femoris), neonate N16.CNhs11225.1525-43A619.21
bone (os femoris), neonate N20.CNhs11195.1350-25C321.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B213.47
cerebellum, neonate N30.CNhs11135.1395-42I228.28
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.31
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.16
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C65.51
eyeball, neonate N01.CNhs11140.1532-43E76.66
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A29.83
forelimb, embryo E11.CNhs10596.335-25E26.90
forelimb, embryo E12.CNhs10600.359-14H28.51
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C413.93
forelimb, embryo E18.CNhs11008.1520-43B514.20
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.90
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F56.10
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E56.05
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E310.51
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G113.30
heart, neonate N16.CNhs11209.782-15G113.94
heart, neonate N20.CNhs11127.821-26I612.43
heart, neonate N25.CNhs11196.1351-25D315.81
heart, neonate N30.CNhs11202.1390-42D218.92
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I315.86
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F79.32
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F29.35
intestine, neonate N10.CNhs11098.755-23A512.09
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E36.92
intestine, neonate N30.CNhs11131.1384-42G111.35
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I29.37
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G715.15
kidney, neonate N10.CNhs11206.758-6D518.59
kidney, neonate N20.CNhs11113.832-19I116.24
kidney, neonate N25.CNhs11122.1353-25F316.01
kidney, neonate N30.CNhs11203.1385-42H117.52
liver, adult pregnant day01.CNhs10466.508-5B219.57
liver, embryo E12.CNhs10601.355-15F816.18
liver, embryo E13.CNhs10524.378-3H616.51
liver, embryo E14.CNhs10594.409-16E116.86
liver, embryo E15.CNhs10520.433-16D719.27
liver, embryo E16.CNhs10523.462-17F526.29
liver, embryo E17.CNhs10510.481-18A318.08
liver, embryo E18.CNhs10579.499-43G418.99
liver, neonate N00.CNhs11117.641-24F418.00
liver, neonate N03.CNhs11123.1345-25G217.30
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B924.03
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H123.14
liver, neonate N30.CNhs11106.1382-42D130.88
lung, adult.CNhs10474.28-22B120.14
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A614.91
lung, embryo E18.CNhs10583.1287-20I617.85
lung, neonate N00.CNhs11224.640-42C625.95
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A319.27
lung, neonate N10.CNhs11219.750-23E628.54
lung, neonate N20.CNhs11109.822-18A425.89
lung, neonate N25.CNhs11119.1359-25C727.11
lung, neonate N30.CNhs11133.1394-42H232.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B616.72
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A314.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I77.95
ovary, embryo E18.CNhs11040.505-44H710.15
ovary, neonate N00.CNhs11217.1299-22I410.75
oviduct, adult pregnant day01.CNhs10500.988-6G69.07
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E58.30
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D819.61
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E67.02
pituitary gland, embryo E13.CNhs11009.370-44C710.61
pituitary gland, embryo E14.CNhs11037.398-44A59.86
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F610.70
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E910.96
placenta, adult pregnant day10.CNhs10472.539-13I724.17
placenta, adult pregnant day17.CNhs10464.577-18G334.74
prostate, adult.CNhs10470.859-1F810.14
skin, adult.CNhs10492.30-1C326.22
skin, neonate N00.CNhs11124.650-25G425.35
skin, neonate N03.CNhs11215.662-22H320.14
skin, neonate N06.CNhs11097.693-20I523.28
skin, neonate N10.CNhs11108.762-6C422.16
small intestine, neonate N16.CNhs11114.790-21I112.53
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G218.62
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F213.70
spleen, neonate N10.CNhs11116.752-24D123.73
spleen, neonate N20.CNhs11112.824-19H120.50
spleen, neonate N25.CNhs11099.1354-25G318.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.01
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D410.04
stomach, embryo E17.CNhs11006.1035-18D511.92
stomach, embryo E18.CNhs10999.1286-20C614.19
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A915.54
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I111.54
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F511.21
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G514.97
testis, embryo E17.CNhs11029.486-18I515.24
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B714.43
testis, neonate N07.CNhs11222.726-26I49.64
testis, neonate N10.CNhs11204.763-44D97.13
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I417.23
thymus, embryo E15.CNhs11005.430-45I212.63
thymus, embryo E16.CNhs11002.456-26C56.76
thymus, embryo E17.CNhs10581.478-18C17.34
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C46.16
thymus, neonate N07.CNhs11211.713-19D36.93
thymus, neonate N10.CNhs11194.748-24E46.86
thymus, neonate N20.CNhs11186.820-7A26.72
thymus, neonate N25.CNhs11125.1362-25G78.27
thymus, neonate N30.CNhs11132.1393-42G210.75
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H359.27
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F761.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G563.96
urinary bladder, adult.CNhs10481.879-12E418.35
uterus, adult pregnant day19.CNhs10497.590-15F513.51
uterus, adult.CNhs10509.92-27E512.45
vagina, adult.CNhs10502.89-27D517.79
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I85.50
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H28.02
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B112.58
whole body, embryo E16.CNhs10514.453-14F212.87
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.37
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F911.00
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B315.67
whole body, neonate N00.CNhs10525.657-19C215.04
whole body, neonate N01.CNhs10576.659-23C616.45
whole body, neonate N06.CNhs10515.692-21D119.63
whole body, neonate N10.CNhs10518.761-6B414.84





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk9.50e-1466
trunk2.73e-1390
trunk region element5.44e-1279
mesenchyme3.24e-1161
entire embryonic mesenchyme3.24e-1161
trunk mesenchyme1.06e-1045
abdomen element3.77e-1049
abdominal segment element3.77e-1049
abdominal segment of trunk3.77e-1049
abdomen3.77e-1049
foregut5.18e-0880
exocrine gland6.52e-0825
exocrine system6.52e-0825
liver9.18e-0822
epithelial sac9.18e-0822
digestive gland9.18e-0822
epithelium of foregut-midgut junction9.18e-0822
anatomical boundary9.18e-0822
hepatobiliary system9.18e-0822
foregut-midgut junction9.18e-0822
hepatic diverticulum9.18e-0822
liver primordium9.18e-0822
septum transversum9.18e-0822
liver bud9.18e-0822
digestive tract diverticulum5.25e-0723
sac5.25e-0723
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