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FFCP PHASE1:Mm9::chr6:16848347..16848391,-: Difference between revisions

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{{FFCP|EntrezGene=21426|HGNC=|UniProt=Q9WTW4,Q3TZX0|association_with_transcript=49bp_to_ENSMUST00000031533,NM_031198,uc009aze.2,uc009azf.2,uc009azg.1_5end|description=CAGE_peak_1_at_Tfec_5end|id=chr6:16848347..16848391,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!8.11e-11!70;UBERON:0009569!2.80e-09!66;UBERON:0002107!8.32e-08!22;UBERON:0007499!8.32e-08!22;UBERON:0006925!8.32e-08!22;UBERON:0009497!8.32e-08!22;UBERON:0000015!8.32e-08!22;UBERON:0002423!8.32e-08!22;UBERON:0006235!8.32e-08!22;UBERON:0008835!8.32e-08!22;UBERON:0003894!8.32e-08!22;UBERON:0004161!8.32e-08!22;UBERON:0008836!8.32e-08!22;UBERON:0000926!1.15e-07!193;UBERON:0004120!1.15e-07!193;UBERON:0006603!1.15e-07!193;UBERON:0003104!2.40e-07!131;UBERON:0009142!2.40e-07!131;UBERON:0005172!3.29e-07!49;UBERON:0005173!3.29e-07!49;UBERON:0002417!3.29e-07!49;UBERON:0000916!3.29e-07!49;UBERON:0002100!3.62e-07!98;UBERON:0002365!3.93e-07!25;UBERON:0002330!3.93e-07!25;UBERON:0005177!4.27e-07!85;UBERON:0009854!5.11e-07!23;UBERON:0009856!5.11e-07!23;UBERON:0002204!9.48e-07!32;UBERON:0005256!9.87e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.49e-12,22;UBERON:0007499,1.49e-12,22;UBERON:0006925,1.49e-12,22;UBERON:0009497,1.49e-12,22;UBERON:0000015,1.49e-12,22;UBERON:0002423,1.49e-12,22;UBERON:0006235,1.49e-12,22;UBERON:0008835,1.49e-12,22;UBERON:0003894,1.49e-12,22;UBERON:0004161,1.49e-12,22;UBERON:0008836,1.49e-12,22;UBERON:0009854,9.39e-12,23;UBERON:0009856,9.39e-12,23;UBERON:0002100,3.49e-11,90;UBERON:0009569,5.96e-11,66;UBERON:0005256,1.42e-10,45;UBERON:0002365,2.36e-10,25;UBERON:0002330,2.36e-10,25;UBERON:0005172,1.15e-09,49;UBERON:0005173,1.15e-09,49;UBERON:0002417,1.15e-09,49;UBERON:0000916,1.15e-09,49;UBERON:0005177,3.82e-09,79;UBERON:0003104,3.86e-09,61;UBERON:0009142,3.86e-09,61;UBERON:0002204,5.80e-09,32;UBERON:0001041,3.44e-07,80;UBERON:0001474,7.23e-07,22;UBERON:0004765,7.23e-07,22;UBERON:0001434,7.23e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,0.137114433605739,2.54633791078818,0.765389611359628,0,0,0.319984845586813,0,1.14846392823004,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,6.69650609179052,14.8453715459522,7.85285615960697,0.588231488031014,0,2.42755176515577,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,2.57880095944881,1.54701627683233,0,0,0,0,0,1.7997994345628,1.97773272513395,4.2628806896766,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.427115042397309,0.186399445825301,0,0.302286240427142,21.7398366526258,2.58127163094416,0,0,1.29955283489534,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,7.76813650941515,1.03909497345377,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,1.17588707135705,0,0.494389935468748,0.289198713839823,1.76922110389975,1.13236794963186,2.87093973998512,1.45462575940567,0,0,0,0.510914110417183,9.10594946244994,17.9970819298022,18.4251829255944,0,0,0,0.173824320192276,0,0,0,0.81471491080253,3.11017426525233,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.60281927134286,0.204109497453984,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,27.3863143052162,37.058098624519,26.1430419443945,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,1.28867461322093,3.42861991859682,4.44756087689741,5.51654315726422,0,2.14108641141214,2.01068167040216,1.59165177632921,2.33956904542944,0,0.432276099749388,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0,1.1858105083486,1.83529616287703,1.37591296579242,3.59779379815766,2.84004169943904,3.37648023653384,4.32863948028414,2.87696137450811,5.67473293712624,4.66754402419738,11.5014565221884,4.46569137202204,5.92871578917665,2.02063102357689,1.61457672169721,0.964887042726734,0.923765950833023,0.568474235311454,0.488894929326078,0.848725428875941,0.469380496577004,2.34508760418542,3.09456733151818,1.75620283072019,1.89162172927429,0.664394068946325,1.2756381492599,1.14704320301017,2.41758974612254,3.03763023021174,9.04747703635634,4.35124547054968,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0.36012218806262,0.388076051348264,0.428674070063185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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21426
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9WTW4,uniprot:Q3TZX0
|association_with_transcript=49bp_to_ENSMUST00000031533,NM_031198,uc009aze.2,uc009azf.2,uc009azg.1_5end
|cluster_id=chr6:16848347..16848391,-
|description=CAGE_peak_1_at_Tfec_5end
|id=chr6:16848347..16848391,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!8.11e-11!70;UBERON:0009569!2.80e-09!66;UBERON:0002107!8.32e-08!22;UBERON:0007499!8.32e-08!22;UBERON:0006925!8.32e-08!22;UBERON:0009497!8.32e-08!22;UBERON:0000015!8.32e-08!22;UBERON:0002423!8.32e-08!22;UBERON:0006235!8.32e-08!22;UBERON:0008835!8.32e-08!22;UBERON:0003894!8.32e-08!22;UBERON:0004161!8.32e-08!22;UBERON:0008836!8.32e-08!22;UBERON:0000926!1.15e-07!193;UBERON:0004120!1.15e-07!193;UBERON:0006603!1.15e-07!193;UBERON:0003104!2.40e-07!131;UBERON:0009142!2.40e-07!131;UBERON:0005172!3.29e-07!49;UBERON:0005173!3.29e-07!49;UBERON:0002417!3.29e-07!49;UBERON:0000916!3.29e-07!49;UBERON:0002100!3.62e-07!98;UBERON:0002365!3.93e-07!25;UBERON:0002330!3.93e-07!25;UBERON:0005177!4.27e-07!85;UBERON:0009854!5.11e-07!23;UBERON:0009856!5.11e-07!23;UBERON:0002204!9.48e-07!32;UBERON:0005256!9.87e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.49e-12,22;UBERON:0007499,1.49e-12,22;UBERON:0006925,1.49e-12,22;UBERON:0009497,1.49e-12,22;UBERON:0000015,1.49e-12,22;UBERON:0002423,1.49e-12,22;UBERON:0006235,1.49e-12,22;UBERON:0008835,1.49e-12,22;UBERON:0003894,1.49e-12,22;UBERON:0004161,1.49e-12,22;UBERON:0008836,1.49e-12,22;UBERON:0009854,9.39e-12,23;UBERON:0009856,9.39e-12,23;UBERON:0002100,3.49e-11,90;UBERON:0009569,5.96e-11,66;UBERON:0005256,1.42e-10,45;UBERON:0002365,2.36e-10,25;UBERON:0002330,2.36e-10,25;UBERON:0005172,1.15e-09,49;UBERON:0005173,1.15e-09,49;UBERON:0002417,1.15e-09,49;UBERON:0000916,1.15e-09,49;UBERON:0005177,3.82e-09,79;UBERON:0003104,3.86e-09,61;UBERON:0009142,3.86e-09,61;UBERON:0002204,5.80e-09,32;UBERON:0001041,3.44e-07,80;UBERON:0001474,7.23e-07,22;UBERON:0004765,7.23e-07,22;UBERON:0001434,7.23e-07,22
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,0.809901069559304,0.699561878128147,0.630924330716475,0.137114433605739,2.54633791078818,0.765389611359628,0,0,0.319984845586813,0,1.14846392823004,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,6.69650609179052,14.8453715459522,7.85285615960697,0.588231488031014,0,2.42755176515577,0,0,0,0,0,0,0,0,0,0,0,0,1.02903774414379,2.57880095944881,1.54701627683233,0,0,0,0,0,1.7997994345628,1.97773272513395,4.2628806896766,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0.589257170947335,0.427115042397309,0.186399445825301,0,0.302286240427142,21.7398366526258,2.58127163094416,0,0,1.29955283489534,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,7.76813650941515,1.03909497345377,0.346970653532272,0.608930956624282,0.691846491768175,0.904335843315735,1.17588707135705,0,0.494389935468748,0.289198713839823,1.76922110389975,1.13236794963186,2.87093973998512,1.45462575940567,0,0,0,0.510914110417183,9.10594946244994,17.9970819298022,18.4251829255944,0,0,0,0.173824320192276,0,0,0,0.81471491080253,3.11017426525233,0.252722758433675,0.210441855886474,0.260240885925407,0.229902104433473,0,0.60281927134286,0.204109497453984,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.278047249225598,0.696504333044333,0.411564272815887,0.398068533636986,27.3863143052162,37.058098624519,26.1430419443945,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0,0,0,0.329119699826961,0.164167464079095,0.162137619091711,0.584799949701329,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0.213288250535234,0.696710015581316,1.28867461322093,3.42861991859682,4.44756087689741,5.51654315726422,0,2.14108641141214,2.01068167040216,1.59165177632921,2.33956904542944,0,0.432276099749388,0,0.379335801906163,0.228497025219458,1.1270773567308,0,0.193952487167626,0.350679099451593,0.0632365371242573,0,0,0,1.1858105083486,1.83529616287703,1.37591296579242,3.59779379815766,2.84004169943904,3.37648023653384,4.32863948028414,2.87696137450811,5.67473293712624,4.66754402419738,11.5014565221884,4.46569137202204,5.92871578917665,2.02063102357689,1.61457672169721,0.964887042726734,0.923765950833023,0.568474235311454,0.488894929326078,0.848725428875941,0.469380496577004,2.34508760418542,3.09456733151818,1.75620283072019,1.89162172927429,0.664394068946325,1.2756381492599,1.14704320301017,2.41758974612254,3.03763023021174,9.04747703635634,4.35124547054968,0.491764273019036,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0.356497378384721,0,1.05418608574999,1.03135543248187,0,0.36012218806262,0.388076051348264,0.428674070063185,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0.21183207086382,0,0,1.45317984026315,0.603129249281559,0.238744688006273,0.164140899745061,0.291480836629851,0,2.9048049735635,2.68302928352189,3.51869602002452,3.57900068308913,1.91371918809435,1.14389086603261,2.54967644990783,4.19854356970974,1.93479963326193,0,0,0.609958401380546,0.216010681643603,0.418176592028937,0.655087691238533,0.674321731924103,0.495920734352016,0.785267825952089,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.209718688851422,0,0.288030006257865,0,1.01362607645082,0.513554785824136,1.42912905275575,1.25318686967237,0.596044064343795,0.480781798079875,0.886137163047463,0.706765149637033,0.609654453239999,0.504130925684203,0.682205165178267,0.577271049841977,1.40252282617883,0.226730383615211,0,0,0,0.386379188064381,0.563047426353546,0,0.428736758158132,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,1.94485373654635,0.419226325255965,1.10306105070008,1.33348036680969,0.412070114477788,0.320919209591815,1.26348605881899,0.50695859978048,0.943131706930381,0.936415074698824,1.08842759088278,0.574354689556133,0.476293691283074,0.927074607558844,0.578727661391115,0,0.735994600671987,1.71434626192708,1.06485483695602,0.953744759789284,0.872078499793971,1.41164070622996,0.930760686808441,1.46342378298218,1.05227884575137,1.49384525230448,0.561142271657738,0.355905054372522,0.985044823755635,0.409231043169689,0.309873682371932,0.578719832943424,0,0.935726433781634,1.07435527024149,0.765153328275374,3.08827986767322,0.695603506861264
|short_description=p1@Tfec
}}

Revision as of 11:12, 5 August 2015

Short description:p1@Tfec
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tfec_5end
Coexpression cluster:NA
Association with transcript: 49bp_to_ENSMUST00000031533, NM_031198, uc009aze.2, uc009azf.2, uc009azg.1_5end
EntrezGene:21426
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tfec

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D418.43
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C827.39
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D237.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.14
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.49e-1222
epithelial sac1.49e-1222
digestive gland1.49e-1222
epithelium of foregut-midgut junction1.49e-1222
anatomical boundary1.49e-1222
hepatobiliary system1.49e-1222
foregut-midgut junction1.49e-1222
hepatic diverticulum1.49e-1222
liver primordium1.49e-1222
septum transversum1.49e-1222
liver bud1.49e-1222
digestive tract diverticulum9.39e-1223
sac9.39e-1223
trunk3.49e-1190
subdivision of trunk5.96e-1166
trunk mesenchyme1.42e-1045
exocrine gland2.36e-1025
exocrine system2.36e-1025
abdomen element1.15e-0949
abdominal segment element1.15e-0949
abdominal segment of trunk1.15e-0949
abdomen1.15e-0949
trunk region element3.82e-0979
mesenchyme3.86e-0961
entire embryonic mesenchyme3.86e-0961
musculoskeletal system5.80e-0932
foregut3.44e-0780
bone element7.23e-0722
skeletal element7.23e-0722
skeletal system7.23e-0722
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