FFCP PHASE1:Mm9::chr6:52664324..52664343,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:52664324..52664343,-|id=chr6:52664324..52664343,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,5.08e-11,25;CL:0002563,1.19e-10,9;CL:0002251,1.19e-10,9;CL:0000223,1.91e-08,20;CL:0000791,4.28e-07,9;CL:0000789,4.28e-07,9;CL:0002420,4.28e-07,9;CL:0002419,4.28e-07,9;CL:0000790,4.28e-07,9;CL:0000838,6.46e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.82e-07,3;DOID:4045,2.82e-07,3|ontology_enrichment_uberon=UBERON:0004923!9.72e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.19e-10,9;UBERON:0004808,1.19e-10,9;UBERON:0001277,1.19e-10,9;UBERON:0001242,9.12e-09,13;UBERON:0001262,9.12e-09,13;UBERON:0004786,9.12e-09,13;UBERON:0000485,1.73e-08,11;UBERON:0000344,2.13e-07,15|phase1_expression=0.160148847104794,3.48975407639361,3.18499467572675,3.93203474698879,3.50627010962443,0.33575854382378,0.700837921786577,2.06597317506522,1.40788722151667,1.40438715793196,0,0,1.02720437958723,1.83582845079895,0,0.607425802169478,0,0.315462165358238,0.274228867211478,0.84877930359606,0.425216450755349,0.992909512008853,0.522399578277871,0.159992422793407,0,3.44539178469012,2.15380998079537,1.07735616342945,0.950117097281869,1.00812051903972,0,0,0.61506478758457,0,1.44425809875637,1.49611180822643,1.42918549383658,4.60384793810598,3.1253413780952,2.09409497589519,19.9998705930545,4.78131839470912,2.91306211818692,0.251793635951155,0,0.367093504323363,2.34717403304412,0,0,0.194429899074283,0.419959264876088,0,1.51004345451963,0.725362142011344,2.35265659399725,0,0,0,0,0,0,0.338844532069132,1.77858959222228,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,4.34796733052517,0,1.3599426674155,0,0,1.79210754838934,0.280888840263504,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0.258937883647172,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.823120949949934,0,0.988779870937496,1.44599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0.510914110417183,1.7972268675888,1.19980546198682,0.889491589511453,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0,0,0.509196819251581,0.373220911830279,0.252722758433675,0.631325567659422,0.260240885925407,0,0,0,0,0.12811372028485,0,0.258703370739016,0.431135985865684,0.378212160335639,0,0,0.278047249225598,0,0,0,1.40442637462647,0.51469581422943,0.852490498186778,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0,0,0,0,0,0.210289948564127,0.102904612379284,0.991256348951394,0,0,0,0,0,0.889512175379481,0.380451252225118,0.949058123089023,0.658795818896044,1.25667604400135,1.1937388322469,0.974820435595601,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0.387904974335251,0.280543279561274,0.442655759869801,0.442830443938806,0.784993639206874,1.85095745882701,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0.312037673114561,1.01031551178845,0,0.482443521363367,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0.433947175744535,0,0.54390568381871,2.45882136509518,1.37968373152366,0,0.234423373184406,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0,0,0.214337035031592,0.532020700926821,0.713475270408282,0.329098041204242,0,0.938686832254841,1.48282449604674,0,0.49465875882444,0.484393280087717,0.180938774784468,0,0,0.291480836629851,0,0.683483523191411,0.412773735926445,1.11116716421827,0.565105371014073,0.136694227721025,0,1.01987057996313,3.07893195112048,1.24379976423981,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0,0,1.16653475962614,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0.724752362478018,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0,0,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,0,0.857473516316263,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0.505394423527595,0,0,0.561849044819294,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p@chr6:52664324..52664343,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:52664324..52664343,- | |||
|description=CAGE_peak_at_chr6:52664324..52664343,- | |||
|id=chr6:52664324..52664343,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.08e-11,25;CL:0002563,1.19e-10,9;CL:0002251,1.19e-10,9;CL:0000223,1.91e-08,20;CL:0000791,4.28e-07,9;CL:0000789,4.28e-07,9;CL:0002420,4.28e-07,9;CL:0002419,4.28e-07,9;CL:0000790,4.28e-07,9;CL:0000838,6.46e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.82e-07,3;DOID:4045,2.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0004923!9.72e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.19e-10,9;UBERON:0004808,1.19e-10,9;UBERON:0001277,1.19e-10,9;UBERON:0001242,9.12e-09,13;UBERON:0001262,9.12e-09,13;UBERON:0004786,9.12e-09,13;UBERON:0000485,1.73e-08,11;UBERON:0000344,2.13e-07,15 | |||
|phase1_expression=0.160148847104794,3.48975407639361,3.18499467572675,3.93203474698879,3.50627010962443,0.33575854382378,0.700837921786577,2.06597317506522,1.40788722151667,1.40438715793196,0,0,1.02720437958723,1.83582845079895,0,0.607425802169478,0,0.315462165358238,0.274228867211478,0.84877930359606,0.425216450755349,0.992909512008853,0.522399578277871,0.159992422793407,0,3.44539178469012,2.15380998079537,1.07735616342945,0.950117097281869,1.00812051903972,0,0,0.61506478758457,0,1.44425809875637,1.49611180822643,1.42918549383658,4.60384793810598,3.1253413780952,2.09409497589519,19.9998705930545,4.78131839470912,2.91306211818692,0.251793635951155,0,0.367093504323363,2.34717403304412,0,0,0.194429899074283,0.419959264876088,0,1.51004345451963,0.725362142011344,2.35265659399725,0,0,0,0,0,0,0.338844532069132,1.77858959222228,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,4.34796733052517,0,1.3599426674155,0,0,1.79210754838934,0.280888840263504,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0.258937883647172,0.445326417194474,0,0,0.230615497256059,0.301445281105245,0.823120949949934,0,0.988779870937496,1.44599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0.209446706813455,0.510914110417183,1.7972268675888,1.19980546198682,0.889491589511453,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0,0,0.509196819251581,0.373220911830279,0.252722758433675,0.631325567659422,0.260240885925407,0,0,0,0,0.12811372028485,0,0.258703370739016,0.431135985865684,0.378212160335639,0,0,0.278047249225598,0,0,0,1.40442637462647,0.51469581422943,0.852490498186778,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0,0,0,0,0,0.210289948564127,0.102904612379284,0.991256348951394,0,0,0,0,0,0.889512175379481,0.380451252225118,0.949058123089023,0.658795818896044,1.25667604400135,1.1937388322469,0.974820435595601,0.898819408654221,0.648414149624083,1.1948476395262,0,0,0,0,0.387904974335251,0.280543279561274,0.442655759869801,0.442830443938806,0.784993639206874,1.85095745882701,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0,0.648540907100142,0.274561413188081,1.43768206527355,0,0.312037673114561,1.01031551178845,0,0.482443521363367,0.369506380333209,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0.433947175744535,0,0.54390568381871,2.45882136509518,1.37968373152366,0,0.234423373184406,0,0,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,1.02131881726136,0,0,0.214337035031592,0.532020700926821,0.713475270408282,0.329098041204242,0,0.938686832254841,1.48282449604674,0,0.49465875882444,0.484393280087717,0.180938774784468,0,0,0.291480836629851,0,0.683483523191411,0.412773735926445,1.11116716421827,0.565105371014073,0.136694227721025,0,1.01987057996313,3.07893195112048,1.24379976423981,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.134864346384821,0,0,1.16653475962614,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0.129159823477731,0,0.117357238645754,0.2604087696879,0.104859344425711,0.724752362478018,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0,0.198681354781265,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0,0,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,0,0.857473516316263,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.103787347584177,0.399024873401031,0,0,0,0.183843508450014,0.666740183404846,0.412070114477788,0,0.505394423527595,0,0,0.561849044819294,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr6:52664324..52664343,- | |||
}} | |||
Latest revision as of 22:54, 5 August 2015
| Short description: | p@chr6:52664324..52664343, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr6:52664324..52664343, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 5.08e-11 | 25 |
| intestinal epithelial cell | 1.19e-10 | 9 |
| epithelial cell of alimentary canal | 1.19e-10 | 9 |
| endodermal cell | 1.91e-08 | 20 |
| mature alpha-beta T cell | 4.28e-07 | 9 |
| alpha-beta T cell | 4.28e-07 | 9 |
| immature T cell | 4.28e-07 | 9 |
| mature T cell | 4.28e-07 | 9 |
| immature alpha-beta T cell | 4.28e-07 | 9 |
| lymphoid lineage restricted progenitor cell | 6.46e-07 | 12 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 1.19e-10 | 9 |
| gastrointestinal system epithelium | 1.19e-10 | 9 |
| intestinal epithelium | 1.19e-10 | 9 |
| intestinal mucosa | 9.12e-09 | 13 |
| wall of intestine | 9.12e-09 | 13 |
| gastrointestinal system mucosa | 9.12e-09 | 13 |
| simple columnar epithelium | 1.73e-08 | 11 |
| mucosa | 2.13e-07 | 15 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 2.82e-07 | 3 |
| muscle cancer | 2.82e-07 | 3 |