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FFCP PHASE1:Mm9::chr8:13105715..13105764,+: Difference between revisions

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{{FFCP|EntrezGene=99375|HGNC=|UniProt=E9PXT5,Q3TCH7|association_with_transcript=0bp_to_ENSMUST00000121426,ENSMUST00000135371,NM_146207,uc009kww.2_5end|description=CAGE_peak_1_at_Cul4a_5end|id=chr8:13105715..13105764,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.81e-14!47;UBERON:0005172!7.52e-14!49;UBERON:0005173!7.52e-14!49;UBERON:0002417!7.52e-14!49;UBERON:0000916!7.52e-14!49;UBERON:0009569!2.55e-12!66;UBERON:0002107!7.32e-12!22;UBERON:0007499!7.32e-12!22;UBERON:0006925!7.32e-12!22;UBERON:0009497!7.32e-12!22;UBERON:0000015!7.32e-12!22;UBERON:0002423!7.32e-12!22;UBERON:0006235!7.32e-12!22;UBERON:0008835!7.32e-12!22;UBERON:0003894!7.32e-12!22;UBERON:0004161!7.32e-12!22;UBERON:0008836!7.32e-12!22;UBERON:0000466!5.75e-11!79;UBERON:0009854!8.27e-11!23;UBERON:0009856!8.27e-11!23;UBERON:0002365!1.83e-10!25;UBERON:0002330!1.83e-10!25;UBERON:0005177!4.12e-09!85;UBERON:0005256!3.50e-08!47;UBERON:0001048!2.57e-07!147;UBERON:0002100!2.81e-07!98;UBERON:0004872!4.04e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.81e-14,47;UBERON:0005172,7.52e-14,49;UBERON:0005173,7.52e-14,49;UBERON:0002417,7.52e-14,49;UBERON:0000916,7.52e-14,49;UBERON:0009569,2.55e-12,66;UBERON:0002107,7.32e-12,22;UBERON:0007499,7.32e-12,22;UBERON:0006925,7.32e-12,22;UBERON:0009497,7.32e-12,22;UBERON:0000015,7.32e-12,22;UBERON:0002423,7.32e-12,22;UBERON:0006235,7.32e-12,22;UBERON:0008835,7.32e-12,22;UBERON:0003894,7.32e-12,22;UBERON:0004161,7.32e-12,22;UBERON:0008836,7.32e-12,22;UBERON:0005177,9.64e-12,79;UBERON:0009854,8.27e-11,23;UBERON:0009856,8.27e-11,23;UBERON:0002365,1.83e-10,25;UBERON:0002330,1.83e-10,25;UBERON:0003104,1.01e-09,61;UBERON:0009142,1.01e-09,61;UBERON:0002100,1.75e-09,90;UBERON:0005256,1.97e-08,45;UBERON:0001048,2.30e-07,134;UBERON:0004872,4.04e-07,33|phase1_expression=27.5456017020246,33.850614541018,35.0349414329943,34.4809200889786,41.5743455855468,34.5831300138493,28.5007421526541,15.7530454598723,15.20518199238,15.6823232635736,13.1837835533639,14.1196721421745,13.353656934634,12.4136971434976,74.6165866467085,85.8495133732862,121.723766794298,17.5081501773822,16.1795031654772,20.7950929381035,19.9851731855014,18.3688259721638,17.7615856614476,20.3190376947626,19.2703796096423,32.1569899904411,25.8457197695445,29.7350301106527,24.893067948785,26.4631636247927,19.0688239163562,30.4814723260623,37.5189520426588,31.6963362030877,28.5963103553762,22.1092078326795,33.4837744270285,17.996860121687,18.7520482685712,22.5115209908733,18.8234076169925,15.7100461540443,16.0218416500281,26.5642285928468,28.7910484663421,25.5129985504737,9.38869613217647,17.0059621976748,18.0142669842267,21.970578595394,24.9175830493145,14.3752564364972,14.7648693330808,15.9579671242496,11.4271891708438,23.4106086792712,29.2264108737532,26.2992767061496,16.9945827122062,10.0508286061686,17.1134478946668,19.6529828600097,10.6715375533337,6.74924787961049,2.96659908770092,4.9733608046227,6.2916023208865,7.30014780110954,20.6342328493871,19.9808788730902,16.6156719467592,17.424710048632,13.9147180799517,17.1487118900936,13.6100568845896,22.0612508786405,11.0115880999389,18.5146640223522,12.4421291937557,17.5408762681158,20.0357939489277,20.3156214517136,15.0758819460746,14.069065250792,17.1134037510027,13.8475435172624,25.4845308630394,25.5367240780662,25.0653699932839,25.0897579554528,29.5661778475711,32.6961073252927,38.7583660213418,44.255661714301,57.8301011528426,71.6843019355737,37.919993435573,22.4968025803036,23.9003124234639,21.9070536196411,28.4503707948895,24.3820307087204,28.028576367731,21.3320010945999,27.9273442904466,22.2956681618087,28.8148933658426,36.6530253898183,12.4290184150642,53.8844964805314,28.104622936114,32.273340701087,33.9004780966406,33.7618714837875,51.9742085539815,56.0472997330353,27.9330313539842,32.1010572362204,55.7304647728421,46.1035522350116,58.5230023920043,54.3060283511449,18.6391761218122,22.8369021669007,27.6469652993761,29.1221042937794,11.3824368280624,16.7972764678154,9.53026703047985,17.2259235315546,27.9075367719362,21.3612398591869,26.7689453096106,25.0601148183724,16.4152555202052,24.8229132493669,34.2180262537063,39.4370096833995,18.4487613656583,31.987162094744,22.7710775184731,22.9902104433473,27.1893816006077,28.6339153887859,37.4881110323816,29.85049682637,34.1074277397413,36.4771752742012,25.4370231660754,25.9075329829912,32.1990557220026,28.4954452155847,29.4730084179134,34.1287123191723,30.4557561883756,32.2435512245959,11.937624184325,14.411482798424,13.6398479709884,34.7971297859643,31.8955441574291,38.1731570297352,33.6177524530999,42.6978382891866,36.0985044156465,37.4379651048157,45.3382048365356,46.9396676316021,37.3550859303601,42.8477081246439,48.7223545370593,47.2225959383823,42.1536221358817,47.3748658224112,19.9775451135921,23.0506331729597,20.8163833279793,20.3626936330929,29.6470668243975,26.0105072483691,29.7683835654036,26.0171746764112,25.57347504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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:99375
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9PXT5,uniprot:Q3TCH7
|association_with_transcript=0bp_to_ENSMUST00000121426,ENSMUST00000135371,NM_146207,uc009kww.2_5end
|cluster_id=chr8:13105715..13105764,+
|description=CAGE_peak_1_at_Cul4a_5end
|id=chr8:13105715..13105764,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.81e-14!47;UBERON:0005172!7.52e-14!49;UBERON:0005173!7.52e-14!49;UBERON:0002417!7.52e-14!49;UBERON:0000916!7.52e-14!49;UBERON:0009569!2.55e-12!66;UBERON:0002107!7.32e-12!22;UBERON:0007499!7.32e-12!22;UBERON:0006925!7.32e-12!22;UBERON:0009497!7.32e-12!22;UBERON:0000015!7.32e-12!22;UBERON:0002423!7.32e-12!22;UBERON:0006235!7.32e-12!22;UBERON:0008835!7.32e-12!22;UBERON:0003894!7.32e-12!22;UBERON:0004161!7.32e-12!22;UBERON:0008836!7.32e-12!22;UBERON:0000466!5.75e-11!79;UBERON:0009854!8.27e-11!23;UBERON:0009856!8.27e-11!23;UBERON:0002365!1.83e-10!25;UBERON:0002330!1.83e-10!25;UBERON:0005177!4.12e-09!85;UBERON:0005256!3.50e-08!47;UBERON:0001048!2.57e-07!147;UBERON:0002100!2.81e-07!98;UBERON:0004872!4.04e-07!33
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.81e-14,47;UBERON:0005172,7.52e-14,49;UBERON:0005173,7.52e-14,49;UBERON:0002417,7.52e-14,49;UBERON:0000916,7.52e-14,49;UBERON:0009569,2.55e-12,66;UBERON:0002107,7.32e-12,22;UBERON:0007499,7.32e-12,22;UBERON:0006925,7.32e-12,22;UBERON:0009497,7.32e-12,22;UBERON:0000015,7.32e-12,22;UBERON:0002423,7.32e-12,22;UBERON:0006235,7.32e-12,22;UBERON:0008835,7.32e-12,22;UBERON:0003894,7.32e-12,22;UBERON:0004161,7.32e-12,22;UBERON:0008836,7.32e-12,22;UBERON:0005177,9.64e-12,79;UBERON:0009854,8.27e-11,23;UBERON:0009856,8.27e-11,23;UBERON:0002365,1.83e-10,25;UBERON:0002330,1.83e-10,25;UBERON:0003104,1.01e-09,61;UBERON:0009142,1.01e-09,61;UBERON:0002100,1.75e-09,90;UBERON:0005256,1.97e-08,45;UBERON:0001048,2.30e-07,134;UBERON:0004872,4.04e-07,33
|phase1_expression=27.5456017020246,33.850614541018,35.0349414329943,34.4809200889786,41.5743455855468,34.5831300138493,28.5007421526541,15.7530454598723,15.20518199238,15.6823232635736,13.1837835533639,14.1196721421745,13.353656934634,12.4136971434976,74.6165866467085,85.8495133732862,121.723766794298,17.5081501773822,16.1795031654772,20.7950929381035,19.9851731855014,18.3688259721638,17.7615856614476,20.3190376947626,19.2703796096423,32.1569899904411,25.8457197695445,29.7350301106527,24.893067948785,26.4631636247927,19.0688239163562,30.4814723260623,37.5189520426588,31.6963362030877,28.5963103553762,22.1092078326795,33.4837744270285,17.996860121687,18.7520482685712,22.5115209908733,18.8234076169925,15.7100461540443,16.0218416500281,26.5642285928468,28.7910484663421,25.5129985504737,9.38869613217647,17.0059621976748,18.0142669842267,21.970578595394,24.9175830493145,14.3752564364972,14.7648693330808,15.9579671242496,11.4271891708438,23.4106086792712,29.2264108737532,26.2992767061496,16.9945827122062,10.0508286061686,17.1134478946668,19.6529828600097,10.6715375533337,6.74924787961049,2.96659908770092,4.9733608046227,6.2916023208865,7.30014780110954,20.6342328493871,19.9808788730902,16.6156719467592,17.424710048632,13.9147180799517,17.1487118900936,13.6100568845896,22.0612508786405,11.0115880999389,18.5146640223522,12.4421291937557,17.5408762681158,20.0357939489277,20.3156214517136,15.0758819460746,14.069065250792,17.1134037510027,13.8475435172624,25.4845308630394,25.5367240780662,25.0653699932839,25.0897579554528,29.5661778475711,32.6961073252927,38.7583660213418,44.255661714301,57.8301011528426,71.6843019355737,37.919993435573,22.4968025803036,23.9003124234639,21.9070536196411,28.4503707948895,24.3820307087204,28.028576367731,21.3320010945999,27.9273442904466,22.2956681618087,28.8148933658426,36.6530253898183,12.4290184150642,53.8844964805314,28.104622936114,32.273340701087,33.9004780966406,33.7618714837875,51.9742085539815,56.0472997330353,27.9330313539842,32.1010572362204,55.7304647728421,46.1035522350116,58.5230023920043,54.3060283511449,18.6391761218122,22.8369021669007,27.6469652993761,29.1221042937794,11.3824368280624,16.7972764678154,9.53026703047985,17.2259235315546,27.9075367719362,21.3612398591869,26.7689453096106,25.0601148183724,16.4152555202052,24.8229132493669,34.2180262537063,39.4370096833995,18.4487613656583,31.987162094744,22.7710775184731,22.9902104433473,27.1893816006077,28.6339153887859,37.4881110323816,29.85049682637,34.1074277397413,36.4771752742012,25.4370231660754,25.9075329829912,32.1990557220026,28.4954452155847,29.4730084179134,34.1287123191723,30.4557561883756,32.2435512245959,11.937624184325,14.411482798424,13.6398479709884,34.7971297859643,31.8955441574291,38.1731570297352,33.6177524530999,42.6978382891866,36.0985044156465,37.4379651048157,45.3382048365356,46.9396676316021,37.3550859303601,42.8477081246439,48.7223545370593,47.2225959383823,42.1536221358817,47.3748658224112,19.9775451135921,23.0506331729597,20.8163833279793,20.3626936330929,29.6470668243975,26.0105072483691,29.7683835654036,26.0171746764112,25.5734750421601,29.2947464213341,20.404749646414,28.3282202125299,34.6842588144372,28.8486884459669,31.9741102875357,24.268124033664,24.8558757355898,25.6892242498134,25.2258308267599,30.6186013794073,33.8123207019241,29.1221398818799,27.9291581521381,38.0136143805527,31.7447416363772,26.2746063403692,25.9047900938268,29.3685250133885,70.5557252467414,36.7059232575407,54.8399596365836,50.1442510618224,61.6694769021049,59.3295812990945,45.8326533206556,49.7714317789902,63.2327384422638,45.5771945892215,50.3188722845741,51.3554507782535,54.2945551219335,44.7064613966388,50.5900706131792,54.9985614354239,25.8654466233247,30.3186258832776,29.4966607360067,26.8197235524797,23.2343345805617,31.3236701416195,31.4217605969538,45.4661399508671,32.6304748299815,31.2265212404773,33.3260466494148,24.415633892645,29.3564469172022,30.3763023021174,16.5870412333199,26.1074728232981,23.1129208318947,27.5936746304732,15.5734072288158,21.5669503329654,26.2295912602681,61.8553771650714,26.8181986503818,27.7211508450613,26.9279247165999,28.6762557543062,25.6218475194753,35.9507194101817,25.9078849071932,28.0565623594859,23.7172666767914,16.0660658210904,36.6205419837333,32.2298742637732,42.1877224725762,27.3850404134409,27.8764790513922,25.734747432428,26.9067965698628,30.5540229204555,23.0335476447003,34.7401717176638,34.6293912845416,30.173299546633,27.8067955140083,33.1838595832607,34.7881408297496,25.7838858120467,33.3630813638712,27.1892251987278,23.4139217646786,28.935499729265,31.3892213546824,33.3549688915872,33.0743531410263,34.7090041990643,37.7821449982574,25.2080164327946,30.2123905335298,24.0733929294561,35.6836382997951,31.6039726623537,30.7980647528092,27.4115302574252,25.358832786797,16.8737024829564,68.0066105575454,22.7025554759545,38.3352671655303,78.9263834849655,74.0882714247956,86.7069276452721,14.9581018394593,17.4939315404573,14.9255971708778,17.184071124272,26.8885594543965,23.9916971209681,29.4854580443517,24.0451540416639,26.6402327770337,26.5682762378097,31.9042339099797,24.6050585464988,22.553005352772,29.8242870281724,15.7834022831573,36.0334875965989,30.7752792250202,35.3901162786167,29.5775995764004,35.818698604045,39.1973177076818,38.2800891441213,33.6598495606532,24.3999962034266,23.618460513145,17.696622755178,20.0697963137263,18.8988161183282,14.9408946424464,18.4397496537506,16.2918710920637,17.6687310794354,13.7351260272357,9.69277919502217,17.298945110685,17.3421038435366,13.9364769457846,17.4143433368996,19.7521964686852,35.8234006112034,22.8645531975287,23.2358888618542,26.0221155364322,26.6601639764423,32.4690682530545,28.3885017614261,25.7242054894879,31.0974704501925,24.8490810751509,25.3178880078947,24.0616115644547,28.6994814513958,13.0165678756422,18.1294535373528,17.550585006027,16.6618845192962,14.0474146785103,20.7104124700728,27.2960724146385,32.7200396188845,30.56131542999,34.764260540766,36.2630771346409,42.4678504519533,37.3374502706714,28.0207677844896,38.5103051510178,34.1141235881127,37.7684156836457,32.4437307184051,35.3964898236156,39.18339327178,41.0089248343079,40.9612574503443,44.3836968368797,43.0187561634062,37.4998169731009,29.5869829470139,27.0866709384478,33.0104999456368,37.1960456317821,32.8482901589062,33.6911581886884,36.891969040771,33.6587470085902,32.6206442182925,34.6300490306947,27.4959713112292,43.8949567059444,44.228512586628,38.0584870147811,42.2977576437687,36.2664428644546,34.7236703333745,33.4522200076934,37.6024344584522,37.6838014175621,45.4418323386202,44.0548887678801
|short_description=p1@Cul4a
}}

Revision as of 04:37, 6 August 2015

Short description:p1@Cul4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cul4a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000121426, ENSMUST00000135371, NM_146207, uc009kww.2_5end
EntrezGene:99375
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cul4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I533.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I635.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I334.48
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A174.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A385.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5121.72
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.18
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A620.80
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.76
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D120.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.27
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I125.85
GP2+ M cell, pool3.CNhs13240.11847-124I229.74
Ileum epithelium, pool1.CNhs13199.10252-104B924.89
Ileum epithelium, pool2.CNhs13232.10253-104C126.46
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I330.48
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G637.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F622.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F733.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H322.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D826.56
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D928.79
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B79.39
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.01
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.76
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E129.23
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.30
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C717.11
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.65
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.62
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D417.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.54
Mouse Schwann, donor1.CNhs12507.11728-123D925.07
Mouse Schwann, donor2.CNhs12573.11746-123F925.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C438.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C844.26
Mouse hepatocyte, donor6.CNhs13090.11822-124F457.83
Mouse hepatocyte, donor8.CNhs13091.11824-124F671.68
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A737.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G127.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.81
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B636.65
accessory axillary lymph node, adult.CNhs10475.1063-29H912.43
adrenal gland, adult.CNhs10508.49-24D753.88
adrenal gland, embryo E14.CNhs11038.406-44C528.10
adrenal gland, embryo E16.CNhs11004.1254-43D632.27
adrenal gland, embryo E17.CNhs11043.1263-45I133.90
adrenal gland, embryo E18.CNhs11026.1262-18F533.76
adrenal gland, neonate N00.CNhs11191.1311-23C151.97
adrenal gland, neonate N25.CNhs11223.1377-27I356.05
amnion, adult pregnant day17.5.CNhs10488.583-22A827.93
aorta, adult.CNhs10498.46-23H132.10
bone (os femoris), adult.CNhs10483.56-12G255.73
bone (os femoris), neonate N02.CNhs11227.1985-43F546.10
bone (os femoris), neonate N16.CNhs11225.1525-43A658.52
bone (os femoris), neonate N20.CNhs11195.1350-25C354.31
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B222.84
cerebellum, neonate N30.CNhs11135.1395-42I227.65
colon, adult.CNhs10468.36-18H729.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.38
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.53
corpora quadrigemina, adult.CNhs10501.16-22A417.23
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F121.36
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F225.06
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B224.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B134.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A239.44
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G431.99
eyeball, embryo E12.CNhs11016.345-16C622.77
eyeball, embryo E14.CNhs10521.399-16E222.99
eyeball, embryo E15.CNhs10593.426-16C927.19
eyeball, embryo E17.CNhs11023.1261-18D428.63
eyeball, neonate N00.CNhs11207.633-15C637.49
eyeball, neonate N01.CNhs11140.1532-43E729.85
eyeball, neonate N02.CNhs11205.1551-44G834.11
eyeball, neonate N16.CNhs11188.777-19A236.48
forelimb, embryo E11.CNhs10596.335-25E225.44
forelimb, embryo E12.CNhs10600.359-14H225.91
forelimb, embryo E13.CNhs10589.384-1E232.20
forelimb, embryo E14.CNhs10577.413-26A828.50
forelimb, embryo E15.CNhs11007.437-20E729.47
forelimb, embryo E17.CNhs10598.1517-43C434.13
forelimb, embryo E18.CNhs11008.1520-43B530.46
gonad, embryo E13.CNhs11044.1564-45I632.24
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.41
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D513.64
heart, embryo E11.CNhs10586.331-24E934.80
heart, embryo E12.CNhs11015.353-12F531.90
heart, embryo E13.CNhs11013.376-3I938.17
heart, embryo E14.CNhs10597.403-26D433.62
heart, embryo E15.CNhs11017.431-16C842.70
heart, embryo E16.CNhs11021.457-17C636.10
heart, embryo E17.CNhs11025.479-18E537.44
heart, embryo E18.CNhs11030.1283-20G345.34
heart, neonate N00.CNhs11213.639-21E346.94
heart, neonate N03.CNhs11221.1349-25I237.36
heart, neonate N10.CNhs11118.749-24G142.85
heart, neonate N16.CNhs11209.782-15G148.72
heart, neonate N20.CNhs11127.821-26I647.22
heart, neonate N25.CNhs11196.1351-25D342.15
heart, neonate N30.CNhs11202.1390-42D247.37
hippocampus, adult.CNhs10478.13-16E819.98
hippocampus, neonate N00.CNhs11228.627-43G123.05
intestinal mucosa, adult.CNhs10506.860-29I320.82
intestine, adult.CNhs10496.178-9A320.36
intestine, embryo E12.CNhs11019.1251-16I529.65
intestine, embryo E13.CNhs11010.381-16D526.01
intestine, embryo E15.CNhs10602.976-16D829.77
intestine, embryo E16.CNhs10585.463-22H426.02
intestine, embryo E17.CNhs10582.482-18D325.57
intestine, embryo E18.CNhs10526.1289-20F729.29
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E928.33
intestine, neonate N06.CNhs11102.688-20B834.68
intestine, neonate N07.CNhs11095.720-20F228.85
intestine, neonate N10.CNhs11098.755-23A531.97
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E324.86
intestine, neonate N30.CNhs11131.1384-42G125.69
kidney, embryo E14.CNhs10606.411-4I925.23
kidney, embryo E15.CNhs10997.434-16F830.62
kidney, embryo E16.CNhs10584.464-22A533.81
kidney, embryo E17.CNhs11028.483-18I229.12
kidney, embryo E18.CNhs11001.1288-20C727.93
kidney, neonate N00.CNhs11214.646-21G738.01
kidney, neonate N10.CNhs11206.758-6D531.74
kidney, neonate N20.CNhs11113.832-19I126.27
kidney, neonate N25.CNhs11122.1353-25F325.90
kidney, neonate N30.CNhs11203.1385-42H129.37
liver, adult pregnant day01.CNhs10466.508-5B270.56
liver, embryo E12.CNhs10601.355-15F836.71
liver, embryo E13.CNhs10524.378-3H654.84
liver, embryo E14.CNhs10594.409-16E150.14
liver, embryo E15.CNhs10520.433-16D761.67
liver, embryo E16.CNhs10523.462-17F559.33
liver, embryo E17.CNhs10510.481-18A345.83
liver, embryo E18.CNhs10579.499-43G449.77
liver, neonate N00.CNhs11117.641-24F463.23
liver, neonate N03.CNhs11123.1345-25G245.58
liver, neonate N06.CNhs11101.684-20A850.32
liver, neonate N07.CNhs11103.716-20H251.36
liver, neonate N10.CNhs11115.751-24B954.29
liver, neonate N20.CNhs11220.823-25A344.71
liver, neonate N25.CNhs11198.1368-26H150.59
liver, neonate N30.CNhs11106.1382-42D155.00
lung, adult.CNhs10474.28-22B125.87
lung, embryo E12.CNhs10522.354-16G230.32
lung, embryo E14.CNhs10604.404-26F829.50
lung, embryo E15.CNhs11020.432-17C526.82
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A631.32
lung, embryo E18.CNhs10583.1287-20I631.42
lung, neonate N00.CNhs11224.640-42C645.47
lung, neonate N06.CNhs11212.683-20E532.63
lung, neonate N07.CNhs11111.715-19A331.23
lung, neonate N10.CNhs11219.750-23E633.33
lung, neonate N20.CNhs11109.822-18A424.42
lung, neonate N25.CNhs11119.1359-25C729.36
lung, neonate N30.CNhs11133.1394-42H230.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.11
mammary gland, adult lactating day02.CNhs10480.595-22B623.11
mammary gland, adult pregnant day19.CNhs10476.588-5H227.59
medulla oblongata, adult.CNhs10477.17-12C215.57
medulla oblongata, neonate N30.CNhs11200.1396-42A321.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C726.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C261.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E126.82
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E227.72
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D425.91
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D528.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I916.07
ovary, adult.CNhs10507.91-2I736.62
ovary, embryo E18.CNhs11040.505-44H732.23
ovary, neonate N00.CNhs11217.1299-22I442.19
oviduct, adult pregnant day01.CNhs10500.988-6G627.39
pancreas, adult.CNhs10486.34-16E427.88
pancreas, embryo E14.CNhs11012.405-44F425.73
pancreas, embryo E15.CNhs11042.1556-45F226.91
pancreas, embryo E16.CNhs11003.460-26E530.55
pancreas, embryo E17.CNhs10599.1558-45G323.03
pancreas, embryo E18.CNhs10580.1535-43I734.74
pancreas, neonate N00.CNhs11105.645-26G934.63
pancreas, neonate N01.CNhs11138.1531-43D730.17
pancreas, neonate N02.CNhs11139.1539-43D827.81
pancreas, neonate N16.CNhs11136.787-43B633.18
pancreas, neonate N25.CNhs11094.1555-45E234.79
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G833.36
pituitary gland, embryo E12.CNhs11018.346-16E627.19
pituitary gland, embryo E13.CNhs11009.370-44C723.41
pituitary gland, embryo E14.CNhs11037.398-44A528.94
pituitary gland, embryo E15.CNhs10592.427-16B931.39
pituitary gland, embryo E16.CNhs11036.449-43F633.35
pituitary gland, embryo E17.CNhs11039.1265-44F533.07
pituitary gland, neonate N00.CNhs11190.1308-22E934.71
placenta, adult pregnant day10.CNhs10472.539-13I737.78
placenta, adult pregnant day17.CNhs10464.577-18G325.21
prostate, adult.CNhs10470.859-1F830.21
skin, adult.CNhs10492.30-1C324.07
skin, neonate N00.CNhs11124.650-25G435.68
skin, neonate N03.CNhs11215.662-22H331.60
skin, neonate N06.CNhs11097.693-20I530.80
skin, neonate N10.CNhs11108.762-6C427.41
small intestine, neonate N16.CNhs11114.790-21I125.36
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G268.01
spleen, embryo E16.CNhs11035.461-43C122.70
spleen, embryo E18.CNhs11011.1271-21F238.34
spleen, neonate N10.CNhs11116.752-24D178.93
spleen, neonate N20.CNhs11112.824-19H174.09
spleen, neonate N25.CNhs11099.1354-25G386.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.93
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E326.89
stomach, embryo E15.CNhs10603.1252-16G823.99
stomach, embryo E16.CNhs11022.459-17D429.49
stomach, embryo E17.CNhs11006.1035-18D524.05
stomach, embryo E18.CNhs10999.1286-20C626.64
stomach, neonate N03.CNhs11193.1340-24B826.57
stomach, neonate N07.CNhs11210.718-18A931.90
stomach, neonate N25.CNhs11104.1355-25E424.61
stomach, neonate N30.CNhs11134.1386-42I122.55
submandibular gland, adult.CNhs10469.59-29C129.82
testis, adult.CNhs10504.57-7G515.78
testis, embryo E13.CNhs11031.389-23F536.03
testis, embryo E15.CNhs11034.443-27C530.78
testis, embryo E16.CNhs11033.470-26G535.39
testis, embryo E17.CNhs11029.486-18I529.58
testis, embryo E18.CNhs11027.503-18G535.82
testis, neonate N00.CNhs11189.1300-22B739.20
testis, neonate N07.CNhs11222.726-26I438.28
testis, neonate N10.CNhs11204.763-44D933.66
testis, neonate N20.CNhs11110.839-18H324.40
testis, neonate N30.CNhs11130.1391-42E223.62
thymus, adult.CNhs10471.38-12B517.70
thymus, embryo E14.CNhs11041.402-44I420.07
thymus, embryo E15.CNhs11005.430-45I218.90
thymus, embryo E16.CNhs11002.456-26C514.94
thymus, embryo E17.CNhs10581.478-18C118.44
thymus, embryo E18.CNhs10595.1273-19G416.29
thymus, neonate N02.CNhs11181.1541-43F817.67
thymus, neonate N03.CNhs11137.2104-43C713.74
thymus, neonate N06.CNhs11197.681-26C49.69
thymus, neonate N07.CNhs11211.713-19D317.30
thymus, neonate N10.CNhs11194.748-24E417.34
thymus, neonate N20.CNhs11186.820-7A213.94
thymus, neonate N25.CNhs11125.1362-25G717.41
thymus, neonate N30.CNhs11132.1393-42G219.75
tongue, adult.CNhs10499.32-1B435.82
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.02
urinary bladder, adult.CNhs10481.879-12E426.66
uterus, adult pregnant day19.CNhs10497.590-15F532.47
uterus, adult.CNhs10509.92-27E528.39
vagina, adult.CNhs10502.89-27D525.72
vesicular gland, adult.CNhs10491.51-27F831.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I827.30
whole body, embryo E12.CNhs10587.857-27C932.72
whole body, embryo E13.CNhs10512.372-23H230.56
whole body, embryo E14.5.CNhs10578.420-27D234.76
whole body, embryo E14.CNhs10519.395-14B136.26
whole body, embryo E16.CNhs10514.453-14F242.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G537.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.02
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G538.51
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G534.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G537.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.44
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G539.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G541.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G540.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G544.38
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G543.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.01
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G537.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.85
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G533.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G534.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G527.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G544.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G538.06
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G542.30
whole body, embryo E17.5.CNhs10513.490-9F936.27
whole body, embryo E17.CNhs10517.475-3I534.72
whole body, embryo E18.CNhs10516.493-3B333.45
whole body, neonate N00.CNhs10525.657-19C237.60
whole body, neonate N01.CNhs10576.659-23C637.68
whole body, neonate N06.CNhs10515.692-21D145.44
whole body, neonate N10.CNhs10518.761-6B444.05





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.81e-1447
abdomen element7.52e-1449
abdominal segment element7.52e-1449
abdominal segment of trunk7.52e-1449
abdomen7.52e-1449
subdivision of trunk2.55e-1266
liver7.32e-1222
epithelial sac7.32e-1222
digestive gland7.32e-1222
epithelium of foregut-midgut junction7.32e-1222
anatomical boundary7.32e-1222
hepatobiliary system7.32e-1222
foregut-midgut junction7.32e-1222
hepatic diverticulum7.32e-1222
liver primordium7.32e-1222
septum transversum7.32e-1222
liver bud7.32e-1222
trunk region element9.64e-1279
digestive tract diverticulum8.27e-1123
sac8.27e-1123
exocrine gland1.83e-1025
exocrine system1.83e-1025
mesenchyme1.01e-0961
entire embryonic mesenchyme1.01e-0961
trunk1.75e-0990
trunk mesenchyme1.97e-0845
primordium2.30e-07134
splanchnic layer of lateral plate mesoderm4.04e-0733
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