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FFCP PHASE1:Mm9::chr8:28285095..28285123,-: Difference between revisions

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{{FFCP|EntrezGene=75767|HGNC=|MCL_coexpression_id=24|UniProt=Q9D620,E9Q8L9|association_with_transcript=0bp_to_ENSMUST00000033878,ENSMUST00000054212,NM_001080813,NM_029423,uc009lhz.2,uc009lia.2_5end|description=CAGE_peak_1_at_Rab11fip1_5end|id=chr8:28285095..28285123,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.46e-20!130;UBERON:0000925!3.46e-20!130;UBERON:0006595!3.46e-20!130;UBERON:0001007!2.16e-19!128;UBERON:0001555!2.16e-19!128;UBERON:0007026!2.16e-19!128;UBERON:0004921!2.35e-18!126;UBERON:0004185!2.35e-18!126;UBERON:0005409!1.14e-13!59;UBERON:0000160!1.58e-11!43;UBERON:0000344!1.16e-09!15;UBERON:0004923!7.37e-09!24;UBERON:0001242!1.03e-08!13;UBERON:0000060!1.03e-08!13;UBERON:0001262!1.03e-08!13;UBERON:0004786!1.03e-08!13;UBERON:0000077!3.33e-07!97;UBERON:0000485!6.65e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.27e-20,118;UBERON:0000925,1.27e-20,118;UBERON:0006595,1.27e-20,118;UBERON:0001007,7.85e-20,116;UBERON:0001555,7.85e-20,116;UBERON:0007026,7.85e-20,116;UBERON:0004921,8.75e-19,114;UBERON:0005409,1.96e-15,47;UBERON:0000160,5.32e-14,31;UBERON:0000344,1.16e-09,15;UBERON:0004923,7.34e-09,24;UBERON:0001242,1.03e-08,13;UBERON:0001262,1.03e-08,13;UBERON:0004786,1.03e-08,13;UBERON:0000485,6.63e-07,11|phase1_expression=41.3184025530368,337.808194594902,377.649368693315,415.888290546891,493.382293997152,160.82834249159,129.888628171112,32.9264474776019,64.7628121897667,65.3040028438362,20.0325022823841,27.1225340584144,17.6336751829142,17.3092396789615,16.3223783289675,10.3262386368811,9.79386629379405,10.8834447048592,10.6949258212476,12.3072999021429,38.3545238581325,6.45391182805754,3.39559725880616,78.7162720143561,80.981476216711,271.03748706229,195.56594625622,169.575860123795,127.88576129414,125.763034750205,72.9493380055953,12.7006134691926,11.6862309641068,15.8481681015439,59.5034336687626,48.8729857353968,77.3801860234379,149.834323803813,65.6321689399992,79.5756090840173,245.880761996964,165.297007359944,128.660243553256,1.88845226963366,2.43304634926835,2.75320128242522,0,9.59310688073965,12.3024262331304,10.8880743481599,2.51975558925653,8.62515386189829,4.02678254538567,25.3876749703971,23.5265659399725,1.28629718017973,3.15186783932632,4.12537673821954,0.202316460859598,1.05798195854407,0.633831403506179,1.69422266034566,3.55717918444456,7.64914759689189,3.9554654502679,2.8419204597844,3.29560121570245,4.61061966385865,0.829516898467821,1.35005938331691,0.630974884054146,2.28520787523043,1.10434270475807,0.857435594504678,1.15014565221884,1.83843757322004,3.30347642998166,2.29837208553338,1.38245879930619,0.791317726381163,1.64677758484337,3.12548022334056,1.3959149950069,2.8138130501584,2.59757021220577,0.294628585473668,0.854230084794618,1.4911955666024,3.63485727999283,2.26714680320357,12.7540375028738,5.16254326188832,48.2779646932503,8.63525106620507,8.4470934268197,10.3046184032387,24.7182179431883,0,0,0,31.4080826101998,0,0,0,40.9168067511195,49.9118934985944,39.9364311561679,44.0749775715571,16.572024553419,17.3677302705845,2.94925055502431,2.43572382649713,3.92046345335299,3.61734337326294,7.64326596382081,3.76999773989026,75.6416601267184,5.06097749219691,15.0383793831479,2.75003644910596,6.8460870722722,4.84875253135222,156.569079423223,4.68449275218475,4.60782754989601,138.202266867848,15.3363359367578,8.39863823390771,16.7732699736445,3.2953940669061,4.11750542536764,1.00523481690292,1.21677024134594,3.06858548796397,4.36354893575076,3.56930778749067,7.63795228877372,25.8766498868993,62.927966849985,57.2401848011209,7.54698569183682,4.36813998423599,5.22180176435513,7.53524089178575,6.53150391852747,4.99643509110914,7.30873451565885,20.6962696591213,11.2095356325078,3.21480336285293,5.80638709741031,3.72632745126877,8.34141747676794,38.6559904839605,36.423438144206,7.16523360546575,11.2354109970118,8.4924809347856,21.0280989552739,13.8774267598786,10.5536726991493,6.48223421259654,6.39210786080068,4.9191057936851,4.47374627373397,3.0229412817553,2.14618721119695,5.7215017759913,3.45575684818309,2.13417703302824,2.1888578577381,2.04679982395465,4.61055242111206,3.75777972529041,3.36463917702604,2.88132914661996,299.028998600337,177.975231364565,4.90562976231038,8.59275685883622,19.0723842756698,33.8828321367215,34.4685967959549,38.6158021008495,120.530381632306,60.938613247884,54.0370698920579,70.0326781584851,55.3698007418301,117.745342533703,116.714546932335,159.910442423257,8.34538764193559,8.45438993311993,21.4144697778853,12.8300336542548,12.6069116658957,14.5181147172959,21.2474764737504,28.6363687080428,24.0208053597303,24.3092412925947,12.1545577105731,10.67808676583,13.1694526725846,8.54476027062444,7.91154473415161,8.20002343158217,6.87489799809833,13.8094145976389,10.3766545136023,4.66754402419738,7.18841032636773,14.5134969590716,10.2972432127805,10.3557339958316,8.96987067609561,13.5084185981743,129.51198630679,5.11626811780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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75767
|HGNC=
|MCL_coexpression_id=24
|TSSclassifier=NA
|UniProt=uniprot:Q9D620,uniprot:E9Q8L9
|association_with_transcript=0bp_to_ENSMUST00000033878,ENSMUST00000054212,NM_001080813,NM_029423,uc009lhz.2,uc009lia.2_5end
|cluster_id=chr8:28285095..28285123,-
|description=CAGE_peak_1_at_Rab11fip1_5end
|id=chr8:28285095..28285123,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.46e-20!130;UBERON:0000925!3.46e-20!130;UBERON:0006595!3.46e-20!130;UBERON:0001007!2.16e-19!128;UBERON:0001555!2.16e-19!128;UBERON:0007026!2.16e-19!128;UBERON:0004921!2.35e-18!126;UBERON:0004185!2.35e-18!126;UBERON:0005409!1.14e-13!59;UBERON:0000160!1.58e-11!43;UBERON:0000344!1.16e-09!15;UBERON:0004923!7.37e-09!24;UBERON:0001242!1.03e-08!13;UBERON:0000060!1.03e-08!13;UBERON:0001262!1.03e-08!13;UBERON:0004786!1.03e-08!13;UBERON:0000077!3.33e-07!97;UBERON:0000485!6.65e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.27e-20,118;UBERON:0000925,1.27e-20,118;UBERON:0006595,1.27e-20,118;UBERON:0001007,7.85e-20,116;UBERON:0001555,7.85e-20,116;UBERON:0007026,7.85e-20,116;UBERON:0004921,8.75e-19,114;UBERON:0005409,1.96e-15,47;UBERON:0000160,5.32e-14,31;UBERON:0000344,1.16e-09,15;UBERON:0004923,7.34e-09,24;UBERON:0001242,1.03e-08,13;UBERON:0001262,1.03e-08,13;UBERON:0004786,1.03e-08,13;UBERON:0000485,6.63e-07,11
|phase1_expression=41.3184025530368,337.808194594902,377.649368693315,415.888290546891,493.382293997152,160.82834249159,129.888628171112,32.9264474776019,64.7628121897667,65.3040028438362,20.0325022823841,27.1225340584144,17.6336751829142,17.3092396789615,16.3223783289675,10.3262386368811,9.79386629379405,10.8834447048592,10.6949258212476,12.3072999021429,38.3545238581325,6.45391182805754,3.39559725880616,78.7162720143561,80.981476216711,271.03748706229,195.56594625622,169.575860123795,127.88576129414,125.763034750205,72.9493380055953,12.7006134691926,11.6862309641068,15.8481681015439,59.5034336687626,48.8729857353968,77.3801860234379,149.834323803813,65.6321689399992,79.5756090840173,245.880761996964,165.297007359944,128.660243553256,1.88845226963366,2.43304634926835,2.75320128242522,0,9.59310688073965,12.3024262331304,10.8880743481599,2.51975558925653,8.62515386189829,4.02678254538567,25.3876749703971,23.5265659399725,1.28629718017973,3.15186783932632,4.12537673821954,0.202316460859598,1.05798195854407,0.633831403506179,1.69422266034566,3.55717918444456,7.64914759689189,3.9554654502679,2.8419204597844,3.29560121570245,4.61061966385865,0.829516898467821,1.35005938331691,0.630974884054146,2.28520787523043,1.10434270475807,0.857435594504678,1.15014565221884,1.83843757322004,3.30347642998166,2.29837208553338,1.38245879930619,0.791317726381163,1.64677758484337,3.12548022334056,1.3959149950069,2.8138130501584,2.59757021220577,0.294628585473668,0.854230084794618,1.4911955666024,3.63485727999283,2.26714680320357,12.7540375028738,5.16254326188832,48.2779646932503,8.63525106620507,8.4470934268197,10.3046184032387,24.7182179431883,0,0,0,31.4080826101998,0,0,0,40.9168067511195,49.9118934985944,39.9364311561679,44.0749775715571,16.572024553419,17.3677302705845,2.94925055502431,2.43572382649713,3.92046345335299,3.61734337326294,7.64326596382081,3.76999773989026,75.6416601267184,5.06097749219691,15.0383793831479,2.75003644910596,6.8460870722722,4.84875253135222,156.569079423223,4.68449275218475,4.60782754989601,138.202266867848,15.3363359367578,8.39863823390771,16.7732699736445,3.2953940669061,4.11750542536764,1.00523481690292,1.21677024134594,3.06858548796397,4.36354893575076,3.56930778749067,7.63795228877372,25.8766498868993,62.927966849985,57.2401848011209,7.54698569183682,4.36813998423599,5.22180176435513,7.53524089178575,6.53150391852747,4.99643509110914,7.30873451565885,20.6962696591213,11.2095356325078,3.21480336285293,5.80638709741031,3.72632745126877,8.34141747676794,38.6559904839605,36.423438144206,7.16523360546575,11.2354109970118,8.4924809347856,21.0280989552739,13.8774267598786,10.5536726991493,6.48223421259654,6.39210786080068,4.9191057936851,4.47374627373397,3.0229412817553,2.14618721119695,5.7215017759913,3.45575684818309,2.13417703302824,2.1888578577381,2.04679982395465,4.61055242111206,3.75777972529041,3.36463917702604,2.88132914661996,299.028998600337,177.975231364565,4.90562976231038,8.59275685883622,19.0723842756698,33.8828321367215,34.4685967959549,38.6158021008495,120.530381632306,60.938613247884,54.0370698920579,70.0326781584851,55.3698007418301,117.745342533703,116.714546932335,159.910442423257,8.34538764193559,8.45438993311993,21.4144697778853,12.8300336542548,12.6069116658957,14.5181147172959,21.2474764737504,28.6363687080428,24.0208053597303,24.3092412925947,12.1545577105731,10.67808676583,13.1694526725846,8.54476027062444,7.91154473415161,8.20002343158217,6.87489799809833,13.8094145976389,10.3766545136023,4.66754402419738,7.18841032636773,14.5134969590716,10.2972432127805,10.3557339958316,8.96987067609561,13.5084185981743,129.51198630679,5.11626811780309,5.21487924614483,5.94107800213158,9.62230017982859,27.303519963016,48.3228590998608,129.568742177578,69.359463406724,62.8959718602521,73.668103119759,95.040722535128,101.193399373415,122.662401677122,6.03165135757089,8.70249094109935,40.324670387561,37.2514607511389,3.37156238974363,5.15731421005694,4.42624352517024,0.504941854408746,2.83957397474631,3.12350995437311,3.87762115919038,2.38968797952552,2.45078541490634,3.96307143104365,2.83367491172426,3.50707029493574,3.16230222357219,1.28528526568723,13.7681882652021,7.47875535402472,12.8680697889325,25.7353391837155,25.2215762845929,5.34117399540959,7.55808892411878,8.11001842950362,10.9261700365886,13.5271465095328,20.9326917466259,10.1789444253702,11.4079161083111,16.4339114126624,12.6502330289999,15.470331487228,20.0859367394735,11.5239100180039,12.6771510107099,12.8602221018955,10.995094485821,7.84822797449111,10.3665882979336,12.7875278628132,34.2620693773017,57.1946591332314,57.1168550962351,79.6400601707349,51.8300809693857,34.7402447586178,44.1677672811605,58.7624421087319,117.46677716183,4.07935664423121,18.2831842453702,8.87463532241857,15.7415348264255,8.66494902221579,15.7198361879179,8.92234875505438,32.1259232688387,31.2091738681757,32.0623939226263,104.059097363647,6.16855187483214,14.6390016331331,28.6214153177773,51.4357208195593,44.5459630042202,60.0146341412452,78.8513967619705,98.6819901279792,172.647144424668,65.2406278741272,24.8024893021044,7.92437694033088,5.46013018508422,6.22243802700952,4.90807329215378,5.06868376472335,4.92900402312167,8.33308063001281,17.7212292079451,23.9168279617746,24.1945205256607,14.220500428268,21.6915980360476,26.1912940770309,25.5944021266256,27.5701111327921,21.0602236068141,19.231271923195,20.8242233316154,17.5681622909777,17.52756553065,16.3338419921682,21.4407337627455,21.0703933192322,15.8952586966934,68.699306235409,29.0801598920025,15.8793526198772,21.489230894602,76.6962688307796,28.5277362685797,63.0041587479392,127.549185552044,93.793983454613,0.564751842617067,1.38097570952153,1.14579102687879,0.859265911718438,1.37016503954128,0.755393897389701,0,0.900642406448441,0,1.03552062350364,4.98179268404048,5.58634822761443,3.75613932659095,10.6966955510049,8.59413966774727,9.19217542250071,10.2233494788743,10.0957178047058,12.5158491740808,9.34979683526051,11.4065684950608,10.9403278003924,10.6751318515666,11.5245274328765,11.5445292600783,12.859929664643,11.8202012463753,11.5745532278223,9.89006161927936,10.5983222496766,4.80016953339582,8.5188386956482,9.77588378784016,12.2090989971156,10.7284693673477,11.253742849593,10.426894453748,9.73357932320019,11.4075455630524,12.906272248128,10.3212465768031,10.0474572023075,8.59385190656348,12.3949472948773,21.2197272079256,19.2354145012218,19.8841867178597,27.9332370262788,10.7121465958552,10.3677966986172,4.40548887678801
|short_description=p1@Rab11fip1
}}

Revision as of 07:46, 6 August 2015

Short description:p1@Rab11fip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab11fip1_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000033878, ENSMUST00000054212, NM_001080813, NM_029423, uc009lhz.2, uc009lia.2_5end
EntrezGene:75767
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab11fip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G741.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5337.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6377.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I3415.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I4493.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7160.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8129.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E764.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F265.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F127.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D178.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D280.98
GP2+ M cell, pool1.CNhs13228.11845-124H9271.04
GP2+ M cell, pool2.CNhs13231.11846-124I1195.57
GP2+ M cell, pool3.CNhs13240.11847-124I2169.58
Ileum epithelium, pool1.CNhs13199.10252-104B9127.89
Ileum epithelium, pool2.CNhs13232.10253-104C1125.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C872.95
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F559.50
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F648.87
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F777.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8149.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H165.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H379.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9245.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2165.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4128.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I925.39
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D93.63
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C448.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G140.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G249.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.94
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B644.07
accessory axillary lymph node, adult.CNhs10475.1063-29H916.57
adrenal gland, adult.CNhs10508.49-24D717.37
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A875.64
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H4156.57
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H7138.20
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.77
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.88
epididymis, adult.CNhs10490.58-23B262.93
eyeball, adult.CNhs10484.31-12G457.24
eyeball, embryo E12.CNhs11016.345-16C67.55
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D47.54
eyeball, neonate N00.CNhs11207.633-15C66.53
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A220.70
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C438.66
forelimb, embryo E18.CNhs11008.1520-43B536.42
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.49
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.03
heart, embryo E11.CNhs10586.331-24E913.88
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E35.72
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I3299.03
intestine, adult.CNhs10496.178-9A3177.98
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D819.07
intestine, embryo E16.CNhs10585.463-22H433.88
intestine, embryo E17.CNhs10582.482-18D334.47
intestine, embryo E18.CNhs10526.1289-20F738.62
intestine, neonate N00.CNhs11126.644-26D1120.53
intestine, neonate N01.CNhs11192.1322-23E960.94
intestine, neonate N06.CNhs11102.688-20B854.04
intestine, neonate N07.CNhs11095.720-20F270.03
intestine, neonate N10.CNhs11098.755-23A555.37
intestine, neonate N20.CNhs11187.827-18D1117.75
intestine, neonate N25.CNhs11121.1352-25E3116.71
intestine, neonate N30.CNhs11131.1384-42G1159.91
kidney, embryo E14.CNhs10606.411-4I98.35
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C712.61
kidney, neonate N00.CNhs11214.646-21G714.52
kidney, neonate N10.CNhs11206.758-6D521.25
kidney, neonate N20.CNhs11113.832-19I128.64
kidney, neonate N25.CNhs11122.1353-25F324.02
kidney, neonate N30.CNhs11203.1385-42H124.31
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F810.68
liver, embryo E13.CNhs10524.378-3H613.17
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F58.20
liver, embryo E17.CNhs10510.481-18A36.87
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F410.38
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H18.97
liver, neonate N30.CNhs11106.1382-42D113.51
lung, adult.CNhs10474.28-22B1129.51
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A627.30
lung, embryo E18.CNhs10583.1287-20I648.32
lung, neonate N00.CNhs11224.640-42C6129.57
lung, neonate N06.CNhs11212.683-20E569.36
lung, neonate N07.CNhs11111.715-19A362.90
lung, neonate N10.CNhs11219.750-23E673.67
lung, neonate N20.CNhs11109.822-18A495.04
lung, neonate N25.CNhs11119.1359-25C7101.19
lung, neonate N30.CNhs11133.1394-42H2122.66
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B640.32
mammary gland, adult pregnant day19.CNhs10476.588-5H237.25
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.43
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I713.77
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I412.87
oviduct, adult pregnant day01.CNhs10500.988-6G625.74
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G920.93
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B616.43
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G820.09
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C712.68
pituitary gland, embryo E14.CNhs11037.398-44A512.86
pituitary gland, embryo E15.CNhs10592.427-16B911.00
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I734.26
placenta, adult pregnant day17.CNhs10464.577-18G357.19
prostate, adult.CNhs10470.859-1F857.12
skin, adult.CNhs10492.30-1C379.64
skin, neonate N00.CNhs11124.650-25G451.83
skin, neonate N03.CNhs11215.662-22H334.74
skin, neonate N06.CNhs11097.693-20I544.17
skin, neonate N10.CNhs11108.762-6C458.76
small intestine, neonate N16.CNhs11114.790-21I1117.47
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G218.28
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F215.74
spleen, neonate N10.CNhs11116.752-24D18.66
spleen, neonate N20.CNhs11112.824-19H115.72
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C632.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C931.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.06
stomach, adult.CNhs10503.33-1H6104.06
stomach, embryo E12.CNhs10588.356-43E36.17
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D428.62
stomach, embryo E17.CNhs11006.1035-18D551.44
stomach, embryo E18.CNhs10999.1286-20C644.55
stomach, neonate N03.CNhs11193.1340-24B860.01
stomach, neonate N07.CNhs11210.718-18A978.85
stomach, neonate N25.CNhs11104.1355-25E498.68
stomach, neonate N30.CNhs11134.1386-42I1172.65
submandibular gland, adult.CNhs10469.59-29C165.24
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D917.72
testis, neonate N20.CNhs11110.839-18H323.92
testis, neonate N30.CNhs11130.1391-42E224.19
thymus, adult.CNhs10471.38-12B514.22
thymus, embryo E14.CNhs11041.402-44I421.69
thymus, embryo E15.CNhs11005.430-45I226.19
thymus, embryo E16.CNhs11002.456-26C525.59
thymus, embryo E17.CNhs10581.478-18C127.57
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F819.23
thymus, neonate N03.CNhs11137.2104-43C720.82
thymus, neonate N06.CNhs11197.681-26C417.57
thymus, neonate N07.CNhs11211.713-19D317.53
thymus, neonate N10.CNhs11194.748-24E416.33
thymus, neonate N20.CNhs11186.820-7A221.44
thymus, neonate N25.CNhs11125.1362-25G721.07
thymus, neonate N30.CNhs11132.1393-42G215.90
tongue, adult.CNhs10499.32-1B468.70
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H329.08
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F715.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.49
urinary bladder, adult.CNhs10481.879-12E476.70
uterus, adult pregnant day19.CNhs10497.590-15F528.53
uterus, adult.CNhs10509.92-27E563.00
vagina, adult.CNhs10502.89-27D5127.55
vesicular gland, adult.CNhs10491.51-27F893.79
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F921.22
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B319.88
whole body, neonate N00.CNhs10525.657-19C227.93
whole body, neonate N01.CNhs10576.659-23C610.71
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B44.41





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.27e-20118
endoderm1.27e-20118
presumptive endoderm1.27e-20118
digestive system7.85e-20116
digestive tract7.85e-20116
primitive gut7.85e-20116
subdivision of digestive tract8.75e-19114
gastrointestinal system1.96e-1547
intestine5.32e-1431
mucosa1.16e-0915
organ component layer7.34e-0924
intestinal mucosa1.03e-0813
wall of intestine1.03e-0813
gastrointestinal system mucosa1.03e-0813
simple columnar epithelium6.63e-0711
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