FFCP PHASE1:Mm9::chr2:105522840..105522844,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18508|HGNC=|MCL_coexpression_id=57|UniProt=D6RDS2|association_with_transcript=46bp_to_ENSMUST00000155081_5end|description=CAGE_peak_22_at_Pax6_5end|id=chr2:105522840..105522844,+|ontology_enrichment_celltype=CL:0002609!1.01e-11!6;CL:0002608!2.71e-09!3;CL:0000117!7.59e-07!23;CL:0000337!7.59e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!8.19e-23!9;UBERON:0000019!8.19e-23!9;UBERON:0000047!8.19e-23!9;UBERON:0004088!8.19e-23!9;UBERON:0002104!8.19e-23!9;UBERON:0001456!8.19e-23!9;UBERON:0003072!8.19e-23!9;UBERON:0003071!8.19e-23!9;UBERON:0004128!8.19e-23!9;UBERON:0001444!2.03e-18!11;UBERON:0000020!9.05e-17!12;UBERON:0001032!9.05e-17!12;UBERON:0004456!9.05e-17!12;UBERON:0005085!2.25e-15!13;UBERON:0002346!5.77e-15!71;UBERON:0003075!5.77e-15!71;UBERON:0007284!5.77e-15!71;UBERON:0003056!5.88e-13!49;UBERON:0000033!2.76e-12!63;UBERON:0004121!4.46e-09!102;UBERON:0000924!4.46e-09!102;UBERON:0006601!4.46e-09!102;UBERON:0007811!5.55e-08!86;UBERON:0000153!5.52e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.47e-48,9;UBERON:0000019,1.47e-48,9;UBERON:0000047,1.47e-48,9;UBERON:0010312,1.47e-48,9;UBERON:0004088,1.47e-48,9;UBERON:0002104,1.47e-48,9;UBERON:0001456,1.47e-48,9;UBERON:0003072,1.47e-48,9;UBERON:0004128,1.47e-48,9;UBERON:0003071,1.47e-48,9;UBERON:0001444,6.64e-40,11;UBERON:0000020,1.18e-36,12;UBERON:0001032,1.18e-36,12;UBERON:0004456,1.18e-36,12;UBERON:0000033,6.63e-34,13;UBERON:0005085,6.63e-34,13;UBERON:0007811,1.00e-12,36;UBERON:0000153,9.33e-11,43;UBERON:0003056,1.64e-09,49;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.841767423545896,1.04096354370163,0,0.900310649026746,0.753524089178575,2.38127747029647,1.5373646434182,1.03071897015702,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0|short_description=p22@Pax6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18508 | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6RDS2 | |||
|association_with_transcript=46bp_to_ENSMUST00000155081_5end | |||
|cluster_id=chr2:105522840..105522844,+ | |||
|description=CAGE_peak_22_at_Pax6_5end | |||
|id=chr2:105522840..105522844,+ | |||
|ontology_enrichment_celltype=CL:0002609!1.01e-11!6;CL:0002608!2.71e-09!3;CL:0000117!7.59e-07!23;CL:0000337!7.59e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!8.19e-23!9;UBERON:0000019!8.19e-23!9;UBERON:0000047!8.19e-23!9;UBERON:0004088!8.19e-23!9;UBERON:0002104!8.19e-23!9;UBERON:0001456!8.19e-23!9;UBERON:0003072!8.19e-23!9;UBERON:0003071!8.19e-23!9;UBERON:0004128!8.19e-23!9;UBERON:0001444!2.03e-18!11;UBERON:0000020!9.05e-17!12;UBERON:0001032!9.05e-17!12;UBERON:0004456!9.05e-17!12;UBERON:0005085!2.25e-15!13;UBERON:0002346!5.77e-15!71;UBERON:0003075!5.77e-15!71;UBERON:0007284!5.77e-15!71;UBERON:0003056!5.88e-13!49;UBERON:0000033!2.76e-12!63;UBERON:0004121!4.46e-09!102;UBERON:0000924!4.46e-09!102;UBERON:0006601!4.46e-09!102;UBERON:0007811!5.55e-08!86;UBERON:0000153!5.52e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.47e-48,9;UBERON:0000019,1.47e-48,9;UBERON:0000047,1.47e-48,9;UBERON:0010312,1.47e-48,9;UBERON:0004088,1.47e-48,9;UBERON:0002104,1.47e-48,9;UBERON:0001456,1.47e-48,9;UBERON:0003072,1.47e-48,9;UBERON:0004128,1.47e-48,9;UBERON:0003071,1.47e-48,9;UBERON:0001444,6.64e-40,11;UBERON:0000020,1.18e-36,12;UBERON:0001032,1.18e-36,12;UBERON:0004456,1.18e-36,12;UBERON:0000033,6.63e-34,13;UBERON:0005085,6.63e-34,13;UBERON:0007811,1.00e-12,36;UBERON:0000153,9.33e-11,43;UBERON:0003056,1.64e-09,49;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0,0,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0.841767423545896,1.04096354370163,0,0.900310649026746,0.753524089178575,2.38127747029647,1.5373646434182,1.03071897015702,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.36012218806262,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |||
|short_description=p22@Pax6 | |||
}} |
Revision as of 08:16, 6 August 2015
Short description: | p22@Pax6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_Pax6_5end |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | 46bp_to_ENSMUST00000155081_5end |
EntrezGene: | 18508 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.47e-48 | 9 |
camera-type eye | 1.47e-48 | 9 |
simple eye | 1.47e-48 | 9 |
immature eye | 1.47e-48 | 9 |
ocular region | 1.47e-48 | 9 |
visual system | 1.47e-48 | 9 |
face | 1.47e-48 | 9 |
optic cup | 1.47e-48 | 9 |
optic vesicle | 1.47e-48 | 9 |
eye primordium | 1.47e-48 | 9 |
subdivision of head | 6.64e-40 | 11 |
sense organ | 1.18e-36 | 12 |
sensory system | 1.18e-36 | 12 |
entire sense organ system | 1.18e-36 | 12 |
head | 6.63e-34 | 13 |
ectodermal placode | 6.63e-34 | 13 |
craniocervical region | 1.00e-12 | 36 |
anterior region of body | 9.33e-11 | 43 |
pre-chordal neural plate | 1.64e-09 | 49 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |