FFCP PHASE2:Hg19::chr21:40032884..40032915,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2078 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3446 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3446 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P11308,B4DVX5 | ||
|association_with_transcript=-293bp_to_ENST00000398919,NM_001243428,uc010gnw.2,uc010gnx.2_5end | |association_with_transcript=-293bp_to_ENST00000398919,NM_001243428,uc010gnw.2,uc010gnx.2_5end | ||
|cluster_id=chr21:40032884..40032915,- | |cluster_id=chr21:40032884..40032915,- |
Latest revision as of 10:32, 18 September 2015
Short description: | p2@ERG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ERG_5end |
Coexpression cluster: | NA |
Association with transcript: | -293bp_to_ENST00000398919, NM_001243428, uc010gnw.2, uc010gnx.2_5end |
EntrezGene: | ERG |
HGNC: | 3446 |
UniProt: | P11308B4DVX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@ERG |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.13e-16 | 9 |
carbohydrate secreting cell | 2.13e-16 | 9 |
chondroblast | 3.91e-13 | 6 |
chondrocyte | 3.91e-13 | 6 |
stromal cell | 1.06e-10 | 28 |
extracellular matrix secreting cell | 2.46e-09 | 15 |
fibrocyte | 6.49e-09 | 3 |
tendon cell | 6.49e-09 | 3 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 6.49e-09 | 3 |
tendon | 6.49e-09 | 3 |
regular connective tissue | 6.49e-09 | 3 |
Showing 1 to 3 of 3 entries