FFCP PHASE2:Hg19::chr1:197886461..197886558,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:56956 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14222 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=56956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14222 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NQ69 | ||
|association_with_transcript=0bp_to_ENST00000337020,ENST00000367387,ENST00000367388,NM_020204,uc001guk.1_5end | |association_with_transcript=0bp_to_ENST00000337020,ENST00000367387,ENST00000367388,NM_020204,uc001guk.1_5end | ||
|cluster_id=chr1:197886461..197886558,+ | |cluster_id=chr1:197886461..197886558,+ |
Latest revision as of 13:25, 19 September 2015
Short description: | p1@LHX9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LHX9_5end |
Coexpression cluster: | C2547_extraskeletal_Fibroblast_glioblastoma_Sertoli_mesothelioma_hepatoma_neuroepithelioma |
Association with transcript: | 0bp_to_ENST00000337020, ENST00000367387, ENST00000367388, NM_020204, uc001guk.1_5end |
EntrezGene: | LHX9 |
HGNC: | 14222 |
UniProt: | Q9NQ69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LHX9 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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skin fibroblast | 4.18e-17 | 23 |
fibroblast | 9.75e-09 | 76 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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skin of body | 3.15e-11 | 41 |
integument | 2.19e-09 | 46 |
integumental system | 2.19e-09 | 46 |
atypical epithelium | 5.11e-07 | 4 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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musculoskeletal system disease | 6.54e-10 | 5 |
myotonic disease | 6.54e-10 | 5 |
muscle tissue disease | 6.54e-10 | 5 |
myopathy | 6.54e-10 | 5 |
muscular disease | 6.54e-10 | 5 |
myotonic dystrophy | 6.54e-10 | 5 |
Showing 1 to 6 of 6 entries