Personal tools

UBERON:0009201

From FANTOM5_SSTAR

Revision as of 17:26, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:20419453..20419476, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379477..31379481,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_006addc8dc83332a4f4d9db9adb060d7p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_006addc8dc83332a4f4d9db9adb060d7p2@Wfdc9
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr4:33600466..33600491,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:33600466..33600491, -
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21380670..21380678, -
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_006addc8dc83332a4f4d9db9adb060d7p3@Lcn12
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221016..73221031, +
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:46041606..46041640, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chr7:75293847..75293851,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:160347529..160347538, +
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_006addc8dc83332a4f4d9db9adb060d7p3@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379261..21379264, -
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_006addc8dc83332a4f4d9db9adb060d7p19@Clu
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:92995710..92995753, +
3.28e-58FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_006addc8dc83332a4f4d9db9adb060d7p@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_006addc8dc83332a4f4d9db9adb060d7p@chr10:28772042..28772046, -
3.28e-58FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_006addc8dc83332a4f4d9db9adb060d7p3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:65941913..65941923, -
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:160573065..160573077, +
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:100350777..100350782, +
3.28e-58FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:75866210..75866235, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379065..21379072, -
3.28e-58FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:126591032..126591039, +
3.28e-58FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chrX:10488683..10488691,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:10488683..10488691, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379322..21379338,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379322..21379338, -
3.28e-58FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_006addc8dc83332a4f4d9db9adb060d7p@chr17:35249011..35249020, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_006addc8dc83332a4f4d9db9adb060d7p3@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:103896072..103896081, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr7:109379335..109379338,+#_006addc8dc83332a4f4d9db9adb060d7p21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107562..34107572, -
3.28e-58FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_006addc8dc83332a4f4d9db9adb060d7p@chr4:134893699..134893708, +
3.28e-58FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90156002..90156013, +
3.28e-58FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_006addc8dc83332a4f4d9db9adb060d7p11@Prrx1
3.28e-58FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:62775330..62775347, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280181..50280192, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_006addc8dc83332a4f4d9db9adb060d7p5@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379125..21379144, -
3.28e-58FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_006addc8dc83332a4f4d9db9adb060d7p3@Glb1l2
3.28e-58FFCP PHASE2:Mm9::chr11:59845404..59845416,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:59845404..59845416, -
3.28e-58FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:87922962..87922982, +
3.28e-58FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:103837894..103837900, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141471..19141518, -
3.28e-58FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_006addc8dc83332a4f4d9db9adb060d7p11@Wars
3.28e-58FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:18338054..18338077, -
3.28e-58FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:112721323..112721328, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141447..19141469,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141447..19141469, +
3.28e-58FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:35930667..35930691, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379377..31379384, +
3.28e-58FFCP PHASE2:Mm9::chr16:28323634..28323657,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:28323634..28323657, -
3.28e-58FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164479340..164479350, +
3.28e-58FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712765..52712772, +
3.28e-58FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_006addc8dc83332a4f4d9db9adb060d7p11@Arhgef40
3.28e-58FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379372..21379404, +
3.28e-58FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_006addc8dc83332a4f4d9db9adb060d7p5@Eddm3b
3.28e-58FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379486..31379501, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496166..130496188, -
3.28e-58FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26731771..26731780, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773718..110773729, +
3.28e-58FFCP PHASE2:Mm9::chr8:19062951..19062955,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19062951..19062955, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_006addc8dc83332a4f4d9db9adb060d7p4@Bpi

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0009201&oldid=1833415"