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EntrezGene:22278

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Revision as of 11:25, 10 February 2012 by Autoedit (talk | contribs) (Created page with "{{EntrezGene |tax_id=10090 |GeneID=22278 |Symbol=Usf1 |LocusTag=- |Synonyms=bHLHb11 |dbXrefs=MGI:99542;;Ensembl:ENSMUSG00000026641;;Vega:OTTMUSG00000030990 |chromosome=...")
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Symbol:Usf1
Description:upstream transcription factor 1
Synonyms:bHLHb11
Species:Mouse (Mus musculus)
Xrefs:
EntrezGene:22278
MGI:99542
Ensembl:ENSMUSG00000026641
Vega:OTTMUSG00000030990
Associated motifs:JASPAR motif:MA0093.1
1motif1_TCGNAG
10motif10_SCGGAGASN
100motif100_GCYTNCTC
101motif101_NAGCAASA
102motif102_GCAAMGT
103motif103_CGGCTAWWT
104motif104_GTWSGMT
105motif105_KTNGNAGWMG
106motif106_KCGCANTC
107motif107_CGTCTGCGTA
108motif108_AACKSARM
109motif109_TCNMTMGC
11motif11_GCGANT
110motif110_AGTCGCAGCG
111motif111_WWAATYCGCTCC
112motif112_CGYGYAWT
113motif113_YGAGCTRTG
114motif114_AAACCCGCTC
115motif115_CATCAACTAC
116motif116_CCAARA
117motif117_SKSNGCGCTSN
118motif118_AATCCGGCT
119motif119_TCAAAANCG
12motif12_ACTAAG
120motif120_TTSMTGNNGKTG
121motif121_TGCAWTGTA
122motif122_TACAAYGGM
123motif123_TTGATGCAGTGA
124motif124_AATNCANCACT
125motif125_TTTAACTCGT
126motif126_AATGCAGTCG
127motif127_TTTTTACCCTC
128motif128_NNGNATRCGWN
129motif129_CTCGTAATCT
13motif13_GAGGATGCK
130motif130_TTTCAAACNCCC
131motif131_CTGCTTAAATA
132motif132_TCRCCAGWY
133motif133_TWTAWAGTWGRAG
134motif134_ATAAGAGAGGC
135motif135_TNKYTGCAKA
136motif136_GTCTGCGTCTCT
137motif137_MAACAGAAGY
138motif138_CTTTWANNYCC
139motif139_CGTTCGAATT
14motif14_TCNACG
140motif140_WTAAATAACG
141motif141_TTAAACGGC
142motif142_TCATATAGAGAAGC
143motif143_ATGATGTG
144motif144_AAKCMSGT
145motif145_GMAGWCGMAW
146motif146_AGACGAAGA
147motif147_ATATCCAGTG
148motif148_NTCSYSTYT
149motif149_CAAGCTGTACA
15motif15_ACTGTG
150motif150_AGCACAGGCG
151motif151_GCCYGTGCMKCW
152motif152_GCKYRMKCGS
153motif153_ACTYNYYATYG
154motif154_GRWGGCAARCG
155motif155_AATARSTCCC
156motif156_ACTGTAGGACMT
157motif157_AAACTWACC
158motif158_SRCGWYACA
159motif159_ACACATACTACA
16motif16_ACCAG
160motif160_AGCCGGTAACG
161motif161_CGGCTTGATT
162motif162_AGTTACCGTCA
163motif163_GARTCGCCCTGTNA
164motif164_AGCCGATTTG
165motif165_AAAGTTACTG
166motif166_TAMAACTTTGS
167motif167_TTGGGTAGGAG
168motif168_TCTCAGAGTATAAA
169motif169_GCCTGGCC
17motif17_CGCTAN
18motif18_CATCAG
19motif19_GYTGGMC
2motif2_GCTGGAGG
20motif20_TGNAGC
21motif21_TCTTGA
22motif22_GGMCTG
23motif23_CGCNAT
24motif24_AGAACT
25motif25_GATCCN
26motif26_CTCCGCAGTA
27motif27_CCTGCA
28motif28_CGTNCA
29motif29_TAGCTCGGCT
3motif3_CGCTNA
30motif30_AGNTCC
31motif31_AGNCGT
32motif32_TRGNMCTNNT
33motif33_AGAGCATGAGACGG
34motif34_GANCCT
35motif35_CGCCYAGA
36motif36_AAGGAGRAN
37motif37_GCTCGCA
38motif38_TCGNCA
39motif39_CCAAGT
4motif4_TGTCTA
40motif40_ATGCGGAGGAG
41motif41_TSACAA
42motif42_CGNTCA
43motif43_CCCWGT
44motif44_TGAAGST
45motif45_GCTCNGG
46motif46_CGNAGT
47motif47_CGAGTN
48motif48_CANTCG
49motif49_ACAGRG
5motif5_CAGTGT
50motif50_GTCCNA
51motif51_CGGNTA
52motif52_CGNATG
53motif53_ANGCTG
54motif54_CGNGTA
55motif55_CGTTATAGCC
56motif56_GANCGT
57motif57_AGGCAT
58motif58_CGGNAT
59motif59_NCWCCARNR
6motif6_AAGACT
60motif60_GCGNAT
61motif61_KAYMGMTN
62motif62_CGNGAT
63motif63_GTNCCA
64motif64_AGTCGN
65motif65_TNGCGA
66motif66_ACCGRTCA
67motif67_GNTAAC
68motif68_CTTTTAAAC
69motif69_RYKNAAATC
7motif7_CGNATC
70motif70_MAATCGC
71motif71_CTCCGCW
72motif72_CAGAAMC
73motif73_GAGCKMGC
74motif74_TTKAAAY
75motif75_AGCCGAGCGCT
76motif76_GGAGCAGCCAAT
77motif77_TCCTTGG
78motif78_NCGNWGCAWN
79motif79_ACATCTACAA
8motif8_CCATGN
80motif80_CTCTGAGAGAA
81motif81_NGCAGAA
82motif82_TTGAATCGCGG
83motif83_TTWTAAA
84motif84_GGKTTYT
85motif85_TWNNGCSNA
86motif86_CGCACAGACCGCGC
87motif87_RCGCACWS
88motif88_CCCTCTTT
89motif89_CGCCGTGTTTA
9motif9_ANGGCT
90motif90_TTATATCGC
91motif91_TTCTTTCG
92motif92_GCGKWWNAA
93motif93_TANTMTCTRWAT
94motif94_CATYTSA
95motif95_AGCGAGCTAGC
96motif96_TKNTTCTGTCTN
97motif97_TTCCCT
98motif98_GCCGAAGATT
99motif99_GYGTSANACG
Transcripton Factor?: No

TSS regions

Mm9::chr1:173341436..173341468,+p1@Usf1
Mm9::chr1:173341474..173341513,+p2@Usf1



View on UCSC genome browser

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TSS expression



Sample

p1@Usf1

p2@Usf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.000.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I552.004.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I655.519.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.517.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I438.574.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I746.175.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I847.1911.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.8617.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.1510.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F217.3211.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.853.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.653.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.7217.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.2618.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.328.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.596.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.097.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A253.7922.40
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A452.1020.57
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A654.3222.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A320.507.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.0618.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.9918.81
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D146.0812.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D246.3411.70
GP2+ M cell, pool1.CNhs13228.11845-124H958.008.04
GP2+ M cell, pool2.CNhs13231.11846-124I149.547.75
GP2+ M cell, pool3.CNhs13240.11847-124I246.117.76
Ileum epithelium, pool1.CNhs13199.10252-104B944.6610.83
Ileum epithelium, pool2.CNhs13232.10253-104C134.535.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.929.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.778.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.066.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.000.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F529.178.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F625.436.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.899.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G860.6935.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H160.9427.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H364.3925.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G941.7628.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H254.6416.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.4922.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.2810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D938.4212.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.4113.40
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B737.5512.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C245.3514.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.2912.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C337.7210.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.3010.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.8117.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.8820.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.3318.86
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.4418.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.788.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.927.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.217.22
Mouse Granule cells, donor1.CNhs12131.11713-123C351.7945.52
Mouse Granule cells, donor2.CNhs12357.11731-123E356.0743.91
Mouse Granule cells, donor3.CNhs12108.11636-122C758.3141.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C637.9512.88
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.248.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C746.3422.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E748.4519.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D251.8727.00
Mouse Microglia, donor1.CNhs12629.11718-123C849.7315.58
Mouse Microglia, donor2.CNhs12634.11736-123E857.6324.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.7929.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.9239.29
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D947.3240.59
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F132.5622.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D532.2521.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D245.2047.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F255.4038.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D644.1225.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.8313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.7913.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.4913.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.8444.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F463.3140.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D861.9947.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.9417.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.7016.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.0911.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.2317.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.4721.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.6528.71
Mouse Schwann, donor1.CNhs12507.11728-123D918.339.47
Mouse Schwann, donor2.CNhs12573.11746-123F917.998.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G328.1215.94
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.959.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.648.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.898.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F417.546.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.545.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.496.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.549.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E337.1516.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.569.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.3119.30
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.7812.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.327.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.770.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.3811.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.9911.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.3311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.386.17
accessory axillary lymph node, adult.CNhs10475.1063-29H917.618.29
adrenal gland, adult.CNhs10508.49-24D721.679.65
adrenal gland, embryo E14.CNhs11038.406-44C519.4310.24
adrenal gland, embryo E16.CNhs11004.1254-43D618.278.22
adrenal gland, embryo E17.CNhs11043.1263-45I116.379.92
adrenal gland, embryo E18.CNhs11026.1262-18F515.3710.70
adrenal gland, neonate N00.CNhs11191.1311-23C117.5212.58
adrenal gland, neonate N25.CNhs11223.1377-27I321.369.80
amnion, adult pregnant day17.5.CNhs10488.583-22A815.336.92
aorta, adult.CNhs10498.46-23H113.167.52
bone (os femoris), adult.CNhs10483.56-12G225.659.73
bone (os femoris), neonate N02.CNhs11227.1985-43F512.465.50
bone (os femoris), neonate N16.CNhs11225.1525-43A615.687.73
bone (os femoris), neonate N20.CNhs11195.1350-25C314.068.24
cecum, adult.CNhs10467.37-13H418.643.73
cerebellum, adult.CNhs10494.15-8B225.4711.71
cerebellum, neonate N30.CNhs11135.1395-42I222.6212.99
colon, adult.CNhs10468.36-18H727.5912.01
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C719.8920.49
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D132.3933.59
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.8927.70
corpora quadrigemina, adult.CNhs10501.16-22A422.4716.63
corpus striatum, adult.CNhs10487.19-21D817.8420.13
corpus striatum, neonate N00.CNhs11226.630-43F122.1238.95
cortex, adult.CNhs10473.12-14D523.9917.56
cortex, neonate N30.CNhs11107.1392-42F221.7418.41
diencephalon, adult.CNhs10482.20-12F230.7514.75
diencephalon, neonate N30.CNhs11201.1388-42B226.6118.66
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.6514.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.6410.45
epididymis, adult.CNhs10490.58-23B224.017.58
eyeball, adult.CNhs10484.31-12G414.527.79
eyeball, embryo E12.CNhs11016.345-16C628.7614.70
eyeball, embryo E14.CNhs10521.399-16E232.1914.94
eyeball, embryo E15.CNhs10593.426-16C925.0316.03
eyeball, embryo E17.CNhs11023.1261-18D419.4412.36
eyeball, neonate N00.CNhs11207.633-15C619.8715.51
eyeball, neonate N01.CNhs11140.1532-43E721.6514.86
eyeball, neonate N02.CNhs11205.1551-44G819.4016.21
eyeball, neonate N16.CNhs11188.777-19A218.8912.16
forelimb, embryo E11.CNhs10596.335-25E230.8317.68
forelimb, embryo E12.CNhs10600.359-14H225.1514.94
forelimb, embryo E13.CNhs10589.384-1E224.2816.89
forelimb, embryo E14.CNhs10577.413-26A821.4814.47
forelimb, embryo E15.CNhs11007.437-20E721.4115.29
forelimb, embryo E17.CNhs10598.1517-43C412.898.71
forelimb, embryo E18.CNhs11008.1520-43B512.768.44
gonad, embryo E13.CNhs11044.1564-45I628.8610.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C840.0325.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D241.1822.13
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D526.4323.30
heart, embryo E11.CNhs10586.331-24E921.968.29
heart, embryo E12.CNhs11015.353-12F525.568.91
heart, embryo E13.CNhs11013.376-3I922.519.90
heart, embryo E14.CNhs10597.403-26D423.679.23
heart, embryo E15.CNhs11017.431-16C818.509.05
heart, embryo E16.CNhs11021.457-17C619.908.79
heart, embryo E17.CNhs11025.479-18E521.3912.79
heart, embryo E18.CNhs11030.1283-20G319.8510.73
heart, neonate N00.CNhs11213.639-21E319.0310.16
heart, neonate N03.CNhs11221.1349-25I213.9912.18
heart, neonate N10.CNhs11118.749-24G115.9211.66
heart, neonate N16.CNhs11209.782-15G117.6711.27
heart, neonate N20.CNhs11127.821-26I618.7111.70
heart, neonate N25.CNhs11196.1351-25D315.3712.29
heart, neonate N30.CNhs11202.1390-42D220.2710.74
hippocampus, adult.CNhs10478.13-16E825.4518.72
hippocampus, neonate N00.CNhs11228.627-43G123.2637.77
intestinal mucosa, adult.CNhs10506.860-29I337.6713.22
intestine, adult.CNhs10496.178-9A321.165.55
intestine, embryo E12.CNhs11019.1251-16I521.7616.85
intestine, embryo E13.CNhs11010.381-16D525.3111.84
intestine, embryo E15.CNhs10602.976-16D817.016.70
intestine, embryo E16.CNhs10585.463-22H416.135.04
intestine, embryo E17.CNhs10582.482-18D314.906.23
intestine, embryo E18.CNhs10526.1289-20F716.938.75
intestine, neonate N00.CNhs11126.644-26D118.9810.91
intestine, neonate N01.CNhs11192.1322-23E914.998.07
intestine, neonate N06.CNhs11102.688-20B817.0911.81
intestine, neonate N07.CNhs11095.720-20F218.1113.53
intestine, neonate N10.CNhs11098.755-23A515.6011.11
intestine, neonate N20.CNhs11187.827-18D117.0813.48
intestine, neonate N25.CNhs11121.1352-25E318.379.29
intestine, neonate N30.CNhs11131.1384-42G122.708.56
kidney, embryo E14.CNhs10606.411-4I927.6915.93
kidney, embryo E15.CNhs10997.434-16F818.7412.00
kidney, embryo E16.CNhs10584.464-22A519.1610.14
kidney, embryo E17.CNhs11028.483-18I219.558.96
kidney, embryo E18.CNhs11001.1288-20C719.5910.86
kidney, neonate N00.CNhs11214.646-21G715.2210.94
kidney, neonate N10.CNhs11206.758-6D516.637.78
kidney, neonate N20.CNhs11113.832-19I112.256.64
kidney, neonate N25.CNhs11122.1353-25F315.075.65
kidney, neonate N30.CNhs11203.1385-42H119.876.54
liver, adult pregnant day01.CNhs10466.508-5B223.1211.56
liver, embryo E12.CNhs10601.355-15F813.186.17
liver, embryo E13.CNhs10524.378-3H612.389.43
liver, embryo E14.CNhs10594.409-16E111.475.17
liver, embryo E15.CNhs10520.433-16D713.394.87
liver, embryo E16.CNhs10523.462-17F514.236.03
liver, embryo E17.CNhs10510.481-18A315.285.60
liver, embryo E18.CNhs10579.499-43G417.558.63
liver, neonate N00.CNhs11117.641-24F417.027.62
liver, neonate N03.CNhs11123.1345-25G215.388.79
liver, neonate N06.CNhs11101.684-20A811.505.75
liver, neonate N07.CNhs11103.716-20H226.0511.91
liver, neonate N10.CNhs11115.751-24B917.169.99
liver, neonate N20.CNhs11220.823-25A325.768.59
liver, neonate N25.CNhs11198.1368-26H123.866.10
liver, neonate N30.CNhs11106.1382-42D116.406.27
lung, adult.CNhs10474.28-22B122.5416.63
lung, embryo E12.CNhs10522.354-16G228.9915.73
lung, embryo E14.CNhs10604.404-26F822.6511.73
lung, embryo E15.CNhs11020.432-17C520.5410.35
lung, embryo E16.CNhs10998.458-17B619.7111.97
lung, embryo E17.CNhs10605.480-44A619.9311.22
lung, embryo E18.CNhs10583.1287-20I623.5713.57
lung, neonate N00.CNhs11224.640-42C615.6114.83
lung, neonate N06.CNhs11212.683-20E519.0711.98
lung, neonate N07.CNhs11111.715-19A316.6114.17
lung, neonate N10.CNhs11219.750-23E614.1917.38
lung, neonate N20.CNhs11109.822-18A424.7415.08
lung, neonate N25.CNhs11119.1359-25C717.6114.16
lung, neonate N30.CNhs11133.1394-42H227.7715.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A148.2521.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A150.0417.95
mammary gland, adult lactating day02.CNhs10480.595-22B616.2311.31
mammary gland, adult pregnant day19.CNhs10476.588-5H212.699.38
medulla oblongata, adult.CNhs10477.17-12C225.8516.54
medulla oblongata, neonate N30.CNhs11200.1396-42A323.7914.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.2816.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.908.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.9313.88
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E225.7710.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.7614.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.7014.10
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.2917.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.2113.59
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.0511.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.2112.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.6010.28
olfactory brain, adult.CNhs10489.18-22I924.4212.53
ovary, adult.CNhs10507.91-2I720.4410.08
ovary, embryo E18.CNhs11040.505-44H727.0718.16
ovary, neonate N00.CNhs11217.1299-22I419.5513.03
oviduct, adult pregnant day01.CNhs10500.988-6G622.2713.86
pancreas, adult.CNhs10486.34-16E418.585.31
pancreas, embryo E14.CNhs11012.405-44F427.1911.41
pancreas, embryo E15.CNhs11042.1556-45F226.9110.28
pancreas, embryo E16.CNhs11003.460-26E525.468.49
pancreas, embryo E17.CNhs10599.1558-45G334.8510.93
pancreas, embryo E18.CNhs10580.1535-43I724.906.76
pancreas, neonate N00.CNhs11105.645-26G917.0610.34
pancreas, neonate N01.CNhs11138.1531-43D723.9913.09
pancreas, neonate N02.CNhs11139.1539-43D817.1112.83
pancreas, neonate N16.CNhs11136.787-43B628.1310.43
pancreas, neonate N25.CNhs11094.1555-45E226.358.43
pancreas, neonate N30.CNhs11182.1548-44H524.756.19
pituitary gland, adult.CNhs10493.21-1G829.6217.36
pituitary gland, embryo E12.CNhs11018.346-16E631.3316.93
pituitary gland, embryo E13.CNhs11009.370-44C740.2321.86
pituitary gland, embryo E14.CNhs11037.398-44A526.1520.36
pituitary gland, embryo E15.CNhs10592.427-16B933.6915.43
pituitary gland, embryo E16.CNhs11036.449-43F634.6013.73
pituitary gland, embryo E17.CNhs11039.1265-44F528.9617.44
pituitary gland, neonate N00.CNhs11190.1308-22E940.1918.57
placenta, adult pregnant day10.CNhs10472.539-13I713.146.57
placenta, adult pregnant day17.CNhs10464.577-18G322.8810.59
prostate, adult.CNhs10470.859-1F816.548.16
skin, adult.CNhs10492.30-1C312.538.57
skin, neonate N00.CNhs11124.650-25G410.6610.01
skin, neonate N03.CNhs11215.662-22H310.377.12
skin, neonate N06.CNhs11097.693-20I515.0413.85
skin, neonate N10.CNhs11108.762-6C413.799.19
small intestine, neonate N16.CNhs11114.790-21I119.829.62
spinal cord, adult.CNhs10505.24-13C922.4413.35
spleen, adult.CNhs10465.25-2G221.709.23
spleen, embryo E16.CNhs11035.461-43C122.2918.78
spleen, embryo E18.CNhs11011.1271-21F218.3310.74
spleen, neonate N10.CNhs11116.752-24D115.639.04
spleen, neonate N20.CNhs11112.824-19H116.138.06
spleen, neonate N25.CNhs11099.1354-25G317.1612.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.4318.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.8917.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.1020.45
stomach, adult.CNhs10503.33-1H615.274.77
stomach, embryo E12.CNhs10588.356-43E328.4717.24
stomach, embryo E15.CNhs10603.1252-16G819.7212.81
stomach, embryo E16.CNhs11022.459-17D418.6811.02
stomach, embryo E17.CNhs11006.1035-18D517.159.41
stomach, embryo E18.CNhs10999.1286-20C619.2210.92
stomach, neonate N03.CNhs11193.1340-24B817.407.28
stomach, neonate N07.CNhs11210.718-18A917.3610.74
stomach, neonate N25.CNhs11104.1355-25E417.0110.47
stomach, neonate N30.CNhs11134.1386-42I126.188.68
submandibular gland, adult.CNhs10469.59-29C132.938.70
testis, adult.CNhs10504.57-7G512.967.89
testis, embryo E13.CNhs11031.389-23F529.3111.66
testis, embryo E15.CNhs11034.443-27C532.2619.52
testis, embryo E16.CNhs11033.470-26G526.2510.89
testis, embryo E17.CNhs11029.486-18I532.4216.40
testis, embryo E18.CNhs11027.503-18G520.4410.98
testis, neonate N00.CNhs11189.1300-22B726.7614.55
testis, neonate N07.CNhs11222.726-26I424.8722.26
testis, neonate N10.CNhs11204.763-44D937.4320.76
testis, neonate N20.CNhs11110.839-18H320.0510.39
testis, neonate N30.CNhs11130.1391-42E212.105.18
thymus, adult.CNhs10471.38-12B521.4910.74
thymus, embryo E14.CNhs11041.402-44I421.0811.96
thymus, embryo E15.CNhs11005.430-45I219.1014.28
thymus, embryo E16.CNhs11002.456-26C515.3314.81
thymus, embryo E17.CNhs10581.478-18C117.908.95
thymus, embryo E18.CNhs10595.1273-19G416.0912.32
thymus, neonate N02.CNhs11181.1541-43F818.3914.66
thymus, neonate N03.CNhs11137.2104-43C714.4713.59
thymus, neonate N06.CNhs11197.681-26C419.1812.82
thymus, neonate N07.CNhs11211.713-19D317.8311.28
thymus, neonate N10.CNhs11194.748-24E414.8210.59
thymus, neonate N20.CNhs11186.820-7A216.4713.06
thymus, neonate N25.CNhs11125.1362-25G715.4916.64
thymus, neonate N30.CNhs11132.1393-42G218.3516.95
tongue, adult.CNhs10499.32-1B413.156.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.317.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.444.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.287.22
urinary bladder, adult.CNhs10481.879-12E418.939.66
uterus, adult pregnant day19.CNhs10497.590-15F517.458.26
uterus, adult.CNhs10509.92-27E521.2511.72
vagina, adult.CNhs10502.89-27D519.299.65
vesicular gland, adult.CNhs10491.51-27F828.599.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.1528.24
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.1122.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.3523.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.8118.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.8123.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.1721.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A628.3520.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.6220.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.1116.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A928.9926.41
whole body, embryo E11.CNhs11014.324-5I837.3619.41
whole body, embryo E12.CNhs10587.857-27C934.7216.76
whole body, embryo E13.CNhs10512.372-23H229.5419.29
whole body, embryo E14.5.CNhs10578.420-27D216.538.27
whole body, embryo E14.CNhs10519.395-14B127.0417.82
whole body, embryo E16.CNhs10514.453-14F222.2513.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.2210.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.0411.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.3912.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G521.489.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.2410.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.0910.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.7010.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.0111.08
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.679.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.1013.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.5210.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.7811.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.1910.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.229.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.8610.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.979.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.277.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.1010.32
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.1510.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.7811.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.2711.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.8910.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.9411.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.017.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.027.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.3711.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.916.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.6511.00
whole body, embryo E17.5.CNhs10513.490-9F914.8510.42
whole body, embryo E17.CNhs10517.475-3I523.2318.49
whole body, embryo E18.CNhs10516.493-3B314.0412.63
whole body, neonate N00.CNhs10525.657-19C213.9712.68
whole body, neonate N01.CNhs10576.659-23C617.988.42
whole body, neonate N06.CNhs10515.692-21D112.1310.15
whole body, neonate N10.CNhs10518.761-6B418.098.58






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ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

GeneID:22278
LocusTag:-
chromosome:1
map location:1 H, 1 93.3 cM, 1 H;;1 93.3 cM
type of gene:protein-coding
Symbol from
nomenclature authority:		Usf1
Full name from
nomenclature authority:		upstream transcription factor 1
Nomenclature status:O
Other designations:Upstream stimulatory factor 1 (Major late transcription factor 1), major late transcription factor 1, upstream stimulatory factor 1, Upstream stimulatory factor 1 (Major late transcription factor 1);;major late transcription factor 1;;upstream stimulatory factor 1
Modification date:08.01.2012







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