Personal tools

UBERON:0009201

From FANTOM5_SSTAR

Revision as of 17:26, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21385325..21385329, -
3.28e-58FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21385325..21385329, -
3.28e-58FFCP PHASE1:Mm9::chr1:90368977..90368987,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr14:66521865..66521876,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:66521865..66521876, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_006addc8dc83332a4f4d9db9adb060d7p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:56772735..56772741, +
3.28e-58FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597725..89597743, +
3.28e-58FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773580..110773589, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_006addc8dc83332a4f4d9db9adb060d7p2@ENSMUST00000152401
3.28e-58FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_006addc8dc83332a4f4d9db9adb060d7p5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_006addc8dc83332a4f4d9db9adb060d7p@chr12:16664708..16664723, +
3.28e-58FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:160573108..160573123, +
3.28e-58FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_006addc8dc83332a4f4d9db9adb060d7p1@9230113P08Rik
3.28e-58FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752228..25752237, +
3.28e-58FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_006addc8dc83332a4f4d9db9adb060d7p@chr19:17585885..17585901, -
3.28e-58FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_006addc8dc83332a4f4d9db9adb060d7p@chr4:134893699..134893708, +
3.28e-58FFCP PHASE1:Mm9::chr3:103650817..103650825,+#_006addc8dc83332a4f4d9db9adb060d7p@chr3:103650817..103650825, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379372..21379404, +
3.28e-58FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_006addc8dc83332a4f4d9db9adb060d7p3@Gm3428
3.28e-58FFCP PHASE1:Mm9::chr12:103896102..103896116,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:103896102..103896116, -
3.28e-58FFCP PHASE1:Mm9::chr11:101959159..101959163,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101959159..101959163, +
3.28e-58FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:88272459..88272484, -
3.28e-58FFCP PHASE1:Mm9::chr16:22504758..22504766,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr2:25349488..25349492,-#_006addc8dc83332a4f4d9db9adb060d7p6@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_006addc8dc83332a4f4d9db9adb060d7p15@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_006addc8dc83332a4f4d9db9adb060d7p3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:160347529..160347538, +
3.28e-58FFCP PHASE1:Mm9::chr12:16663110..16663116,+#_006addc8dc83332a4f4d9db9adb060d7p3@Ntsr2
3.28e-58FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_006addc8dc83332a4f4d9db9adb060d7p3@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:156776465..156776473, -
3.28e-58FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_006addc8dc83332a4f4d9db9adb060d7p4@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:54359310..54359337, -
3.28e-58FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:34107586..34107593, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378296..21378303, +
3.28e-58FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:72756032..72756041, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379098..21379104,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr8:126604677..126604701,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611303..63611312, +
3.28e-58FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141482..19141496, +
3.28e-58FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_006addc8dc83332a4f4d9db9adb060d7p@chr3:65253465..65253475, +
3.28e-58FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_006addc8dc83332a4f4d9db9adb060d7p9@Tecta
3.28e-58FFCP PHASE1:Mm9::chr12:110131610..110131621,-#_006addc8dc83332a4f4d9db9adb060d7p11@Wars
3.28e-58FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:67453354..67453365, -
3.28e-58FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611303..63611312, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141471..19141518, -
3.28e-58FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:91107095..91107103, +
3.28e-58FFCP PHASE2:Mm9::chr13:46041606..46041640,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:46041606..46041640, -
3.28e-58FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280199..50280211, +
3.28e-58FFCP PHASE1:Mm9::chr2:148676901..148676906,-#_006addc8dc83332a4f4d9db9adb060d7p8@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379159..21379162, -
3.28e-58FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:96150839..96150842, -
3.28e-58FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:77645280..77645295, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379430..21379437,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379430..21379437, -
3.28e-58FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:54678983..54678995, -
3.28e-58FFCP PHASE1:Mm9::chr13:23683348..23683398,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:23683348..23683398, +
3.28e-58FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_006addc8dc83332a4f4d9db9adb060d7p@chr4:138824620..138824627, +
3.28e-58FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:63611201..63611210, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379550..31379559,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379550..31379559, +
3.28e-58FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:110773731..110773753, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_006addc8dc83332a4f4d9db9adb060d7p3@Bpi
3.28e-58FFCP PHASE1:Mm9::chr16:28323634..28323657,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:28323634..28323657, -
3.28e-58FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_006addc8dc83332a4f4d9db9adb060d7p2@Wfdc11
3.28e-58FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:75293847..75293851, +
3.28e-58FFCP PHASE1:Mm9::chr18:44319583..44319592,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:44319583..44319592, -
3.28e-58FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_006addc8dc83332a4f4d9db9adb060d7p1@ENSMUST00000139012, p1@uc008uqo.1
3.28e-58FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_006addc8dc83332a4f4d9db9adb060d7p9@Tecta
3.28e-58FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378927..21378932, -
3.28e-58FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:35930706..35930717, +
3.28e-58FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_006addc8dc83332a4f4d9db9adb060d7p@chr3:107731917..107731926, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280181..50280192, +
3.28e-58FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31377177..31377184, +
3.28e-58FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:103276578..103276585, +
3.28e-58FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_006addc8dc83332a4f4d9db9adb060d7p@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155951..90155962, +
3.28e-58FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:23045782..23045791, +
3.28e-58FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE2:Mm9::chr9:56469136..56469145,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:56469136..56469145, -
3.28e-58FFCP PHASE2:Mm9::chr17:24865194..24865204,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_006addc8dc83332a4f4d9db9adb060d7p3@Gm3428
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:113585714..113585722, -
3.28e-58FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_006addc8dc83332a4f4d9db9adb060d7p11@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr4:106731469..106731481,-#_006addc8dc83332a4f4d9db9adb060d7p@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677155..51677162,-#_006addc8dc83332a4f4d9db9adb060d7p5@Rnase12
3.28e-58FFCP PHASE2:Mm9::chr9:35651679..35651691,-#_006addc8dc83332a4f4d9db9adb060d7p5@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_006addc8dc83332a4f4d9db9adb060d7p5@Med24
3.28e-58FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958855..101958871, -
3.28e-58FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_006addc8dc83332a4f4d9db9adb060d7p@chr5:77645280..77645295, -
3.28e-58FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597660..89597668, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0009201&oldid=1833415"