FFCP PHASE1:Mm9::chr3:53960074..53960100,+
From FANTOM5_SSTAR
Short description: | p2@Trpc4 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Trpc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 40bp_to_ENSMUST00000029311_5end |
EntrezGene: | Trpc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@Trpc4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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raphe nuclei neuron | 2.91e-08 | 3 |
Ontology term | p-value | n |
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occipital lobe | 3.33e-28 | 10 |
visual cortex | 3.33e-28 | 10 |
neocortex | 3.33e-28 | 10 |
regional part of cerebral cortex | 8.74e-23 | 17 |
cerebral cortex | 4.04e-21 | 21 |
cerebral hemisphere | 4.04e-21 | 21 |
pallium | 4.04e-21 | 21 |
brain grey matter | 1.74e-19 | 29 |
regional part of telencephalon | 1.74e-19 | 29 |
telencephalon | 1.74e-19 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.