NonredundantMotifs:2

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known2
• db :JASPAR
• Id :MA0080.2
• name :SPI1
• score :2.115836116731318
  
• External refs:

EntrezGene:6688
UniProt:6688

• Internal refs:

EntrezGene:6688

Motif matrix
P0 A C G T 1 33 3 6 0 2 4 0 37 1 3 4 0 38 0 4 42 0 0 0 5 41 0 1 0 6 5 3 33 1 7 3 5 2 32