NonredundantMotifs:17

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known17
• db :JASPAR
• Id :MA0035.2
• name :Gata1
• score :0.20747286391586373
  
• External refs:

EntrezGene:2623
UniProt:2623

• Internal refs:

EntrezGene:2623

Motif matrix
P0 A C G T 1 1423 560 1242 775 2 708 1633 1235 424 3 2782 31 10 1177 4 0 0 4000 0 5 4000 0 0 0 6 27 29 109 3835 7 3887 0 6 107 8 3550 4 383 63 9 799 681 2296 224 10 1432 897 1360 311 11 1487 829 1099 585