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NonredundantMotifs:84

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known84
  • db :SWISSREGULON
  • Id :RREB1.p2
  • name :RREB1
  • score :1.265724185079713
  • External refs:
EntrezGene:RREB1
UniProt:RREB1

  • Internal refs:
EntrezGene:RREB1


Motif matrix
P0ACGT
131.289792225.669719.91034410.746371
28.774075260.0877140.9674787.78695
322.60165247.2118112.9380544.864702
42.937916252.30540811.69820510.674688
5133.572578138.1525750.9756214.915443
6182.54294985.2668142.9369916.869463
7118.912106152.8465433.9158051.941763
871.129964190.9271661.92857913.630508
90.957928272.7663580.9737712.91816
10247.480446.7582369.72894913.648592
1132.130469234.682417.8657182.93762
1231.992572241.71969803.903947
1326.32765239.596153011.692414
1472.98442190.9572577.828065.84648
1518.437261252.3768013.8533952.94876
16108.303846101.040527.80466460.467187
1742.821348182.89352725.38200226.51934
1880.859677181.2020795.8101119.74435
197.699796221.94431646.9970560.975049
2056.522138157.76342851.68311711.647534

Sub Motif Members