CL:0000809
From FANTOM5_SSTAR
Name: | double-positive, alpha-beta thymocyte |
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Namespace: | FANTOM |
Definition: | "A thymocyte expressing the alpha-beta T cell receptor complex as well as both the CD4 and CD8 coreceptors." [GO_REF:0000031, GOC:add, GOC:tfm, ISBN:0781735149] |
Synonyms: |
"double-positive, alpha-beta immature T lymphocyte" EXACT [] "DP cell" EXACT [] "DP thymocyte" EXACT [] |
Comments: | Thymocytes of this stage are undergoing positive and negative selection. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000790(immature alpha-beta T cell),CL:0000893(thymocyte) |
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develops_from: | CL:0000805(immature single positive thymocyte) |
part_of: | UBERON:0002370(thymus) |
Children
is a: | CL:0002427 (resting double-positive thymocyte),CL:0002428 (double-positive blast),CL:0002429 (CD69-positive double-positive thymocyte),CL:0002431 (CD4-positive, CD8-intermediate double-positive thymocyte) |
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develops from: | CL:0000810 (CD4-positive, alpha-beta thymocyte),CL:0000914 (immature NK T cell),CL:0002039 (immature NK T cell stage I) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000809 (double-positive, alpha-beta thymocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
3.29e-195 | FFCP PHASE2:Hg19::chr2:162762361..162762364,+#_484cda2b6815eed9d8af1e737eba2e48 | p@chr2:162762361..162762364, + |
3.29e-195 | FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_484cda2b6815eed9d8af1e737eba2e48 | p@chr2:162762361..162762364, + |
1.55e-98 | FFCP PHASE2:Hg19::chr4:133657651..133657654,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:133657651..133657654, - |
1.55e-98 | FFCP PHASE2:Hg19::chr1:237900222..237900230,+#_436f6b1d0291644c9de12c89649651a9 | p@chr1:237900222..237900230, + |
1.55e-98 | FFCP PHASE1:Hg19::chr2:162762231..162762234,+#_436f6b1d0291644c9de12c89649651a9 | p@chr2:162762231..162762234, + |
1.55e-98 | FFCP PHASE1:Hg19::chr7:38287827..38287832,-#_436f6b1d0291644c9de12c89649651a9 | p@chr7:38287827..38287832, - |
1.55e-98 | FFCP PHASE2:Hg19::chr22:46041912..46041915,+#_436f6b1d0291644c9de12c89649651a9 | p@chr22:46041912..46041915, + |
1.55e-98 | FFCP PHASE1:Hg19::chr13:49078833..49078841,-#_436f6b1d0291644c9de12c89649651a9 | p@chr13:49078833..49078841, - |
1.55e-98 | FFCP PHASE1:Hg19::chr4:175858389..175858405,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175858389..175858405, - |
1.55e-98 | FFCP PHASE2:Hg19::chr10:11846830..11846860,-#_436f6b1d0291644c9de12c89649651a9 | p@chr10:11846830..11846860, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:105805755..105805761,+#_436f6b1d0291644c9de12c89649651a9 | p@chr4:105805755..105805761, + |
1.55e-98 | FFCP PHASE1:Hg19::chr7:19479837..19479844,+#_436f6b1d0291644c9de12c89649651a9 | p@chr7:19479837..19479844, + |
1.55e-98 | FFCP PHASE2:Hg19::chr15:91989133..91989141,+#_436f6b1d0291644c9de12c89649651a9 | p@chr15:91989133..91989141, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:134707420..134707442,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:134707420..134707442, - |
1.55e-98 | FFCP PHASE2:Hg19::chr8:75251775..75251785,+#_436f6b1d0291644c9de12c89649651a9 | p@chr8:75251775..75251785, + |
1.55e-98 | FFCP PHASE2:Hg19::chr4:175842537..175842553,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175842537..175842553, - |
1.55e-98 | FFCP PHASE1:Hg19::chr9:87797549..87797564,+#_436f6b1d0291644c9de12c89649651a9 | p@chr9:87797549..87797564, + |
1.55e-98 | FFCP PHASE1:Hg19::chr9:116857558..116857566,-#_436f6b1d0291644c9de12c89649651a9 | p@chr9:116857558..116857566, - |
1.55e-98 | FFCP PHASE1:Hg19::chr8:51970952..51970959,+#_436f6b1d0291644c9de12c89649651a9 | p@chr8:51970952..51970959, + |
1.55e-98 | FFCP PHASE2:Hg19::chr9:4544914..4544917,-#_436f6b1d0291644c9de12c89649651a9 | p@chr9:4544914..4544917, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:202521027..202521058,-#_436f6b1d0291644c9de12c89649651a9 | p@chr2:202521027..202521058, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:92006659..92006679,+#_436f6b1d0291644c9de12c89649651a9 | p2@uc002bqw.2 |
1.55e-98 | FFCP PHASE1:Hg19::chr16:67022522..67022529,+#_436f6b1d0291644c9de12c89649651a9 | p12@CES4A |
1.55e-98 | FFCP PHASE2:Hg19::chr17:14101134..14101143,+#_436f6b1d0291644c9de12c89649651a9 | p@chr17:14101134..14101143, + |
1.55e-98 | FFCP PHASE2:Hg19::chr15:92006659..92006679,+#_436f6b1d0291644c9de12c89649651a9 | p2@uc002bqw.2 |
1.55e-98 | FFCP PHASE2:Hg19::chr2:162762231..162762234,+#_436f6b1d0291644c9de12c89649651a9 | p@chr2:162762231..162762234, + |
1.55e-98 | FFCP PHASE2:Hg19::chr1:200990231..200990238,-#_436f6b1d0291644c9de12c89649651a9 | p@chr1:200990231..200990238, - |
1.55e-98 | FFCP PHASE2:Hg19::chr7:38287827..38287832,-#_436f6b1d0291644c9de12c89649651a9 | p@chr7:38287827..38287832, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:146687090..146687095,+#_436f6b1d0291644c9de12c89649651a9 | p@chr2:146687090..146687095, + |
1.55e-98 | FFCP PHASE2:Hg19::chr21:43982135..43982142,+#_436f6b1d0291644c9de12c89649651a9 | p@chr21:43982135..43982142, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:134707449..134707458,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:134707449..134707458, - |
1.55e-98 | FFCP PHASE2:Hg19::chr7:19479837..19479844,+#_436f6b1d0291644c9de12c89649651a9 | p@chr7:19479837..19479844, + |
1.55e-98 | FFCP PHASE2:Hg19::chr21:39490932..39490937,+#_436f6b1d0291644c9de12c89649651a9 | p@chr21:39490932..39490937, + |
1.55e-98 | FFCP PHASE1:Hg19::chr10:11846830..11846860,-#_436f6b1d0291644c9de12c89649651a9 | p@chr10:11846830..11846860, - |
1.55e-98 | FFCP PHASE1:Hg19::chr8:16739475..16739490,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:16739475..16739490, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:175858389..175858405,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175858389..175858405, - |
1.55e-98 | FFCP PHASE1:Hg19::chr21:47278815..47278834,+#_436f6b1d0291644c9de12c89649651a9 | p6@PCBP3 |
1.55e-98 | FFCP PHASE1:Hg19::chr4:128884938..128884941,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:128884938..128884941, - |
1.55e-98 | FFCP PHASE2:Hg19::chr9:87797549..87797564,+#_436f6b1d0291644c9de12c89649651a9 | p@chr9:87797549..87797564, + |
1.55e-98 | FFCP PHASE2:Hg19::chr4:134707420..134707442,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:134707420..134707442, - |
1.55e-98 | FFCP PHASE2:Hg19::chr9:116857558..116857566,-#_436f6b1d0291644c9de12c89649651a9 | p@chr9:116857558..116857566, - |
1.55e-98 | FFCP PHASE2:Hg19::chr8:51970952..51970959,+#_436f6b1d0291644c9de12c89649651a9 | p@chr8:51970952..51970959, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:175842470..175842486,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175842470..175842486, - |
1.55e-98 | FFCP PHASE2:Hg19::chr16:67022368..67022374,-#_436f6b1d0291644c9de12c89649651a9 | p@chr16:67022368..67022374, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:141989111..141989114,-#_436f6b1d0291644c9de12c89649651a9 | p@chr2:141989111..141989114, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:237900222..237900230,+#_436f6b1d0291644c9de12c89649651a9 | p@chr1:237900222..237900230, + |
1.55e-98 | FFCP PHASE1:Hg19::chr15:92006720..92006726,+#_436f6b1d0291644c9de12c89649651a9 | p1@uc002bqw.2 |
1.55e-98 | FFCP PHASE2:Hg19::chr2:202521027..202521058,-#_436f6b1d0291644c9de12c89649651a9 | p@chr2:202521027..202521058, - |
1.55e-98 | FFCP PHASE2:Hg19::chr17:14103251..14103258,+#_436f6b1d0291644c9de12c89649651a9 | p@chr17:14103251..14103258, + |
1.55e-98 | FFCP PHASE1:Hg19::chr5:24272119..24272147,-#_436f6b1d0291644c9de12c89649651a9 | p@chr5:24272119..24272147, - |
1.55e-98 | FFCP PHASE1:Hg19::chr4:2428062..2428080,+#_436f6b1d0291644c9de12c89649651a9 | p1@uc003gfa.1 |
1.55e-98 | FFCP PHASE2:Hg19::chr14:22962827..22962830,+#_436f6b1d0291644c9de12c89649651a9 | p3@uc001weo.2 |
1.55e-98 | FFCP PHASE1:Hg19::chr8:50081052..50081075,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:50081052..50081075, - |
1.55e-98 | FFCP PHASE2:Hg19::chr15:92006720..92006726,+#_436f6b1d0291644c9de12c89649651a9 | p1@uc002bqw.2 |
1.55e-98 | FFCP PHASE1:Hg19::chr4:176123823..176123829,+#_436f6b1d0291644c9de12c89649651a9 | p@chr4:176123823..176123829, + |
1.55e-98 | FFCP PHASE1:Hg19::chr8:114877856..114877881,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:114877856..114877881, - |
1.55e-98 | FFCP PHASE1:Hg19::chr2:146998057..146998070,-#_436f6b1d0291644c9de12c89649651a9 | p@chr2:146998057..146998070, - |
1.55e-98 | FFCP PHASE1:Hg19::chr4:134707474..134707504,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:134707474..134707504, - |
1.55e-98 | FFCP PHASE2:Hg19::chr2:146687090..146687095,+#_436f6b1d0291644c9de12c89649651a9 | p@chr2:146687090..146687095, + |
1.55e-98 | FFCP PHASE1:Hg19::chr7:117926347..117926353,-#_436f6b1d0291644c9de12c89649651a9 | p@chr7:117926347..117926353, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:189141918..189141929,+#_436f6b1d0291644c9de12c89649651a9 | p@chr1:189141918..189141929, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:133657589..133657598,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:133657589..133657598, - |
1.55e-98 | FFCP PHASE2:Hg19::chr8:16739475..16739490,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:16739475..16739490, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:134707449..134707458,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:134707449..134707458, - |
1.55e-98 | FFCP PHASE1:Hg19::chr9:72117884..72117889,-#_436f6b1d0291644c9de12c89649651a9 | p@chr9:72117884..72117889, - |
1.55e-98 | FFCP PHASE2:Hg19::chr8:114877856..114877881,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:114877856..114877881, - |
1.55e-98 | FFCP PHASE1:Hg19::chr22:46041912..46041915,+#_436f6b1d0291644c9de12c89649651a9 | p@chr22:46041912..46041915, + |
1.55e-98 | FFCP PHASE2:Hg19::chr4:128884938..128884941,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:128884938..128884941, - |
1.55e-98 | FFCP PHASE1:Hg19::chr17:14101134..14101143,+#_436f6b1d0291644c9de12c89649651a9 | p@chr17:14101134..14101143, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:175842511..175842520,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175842511..175842520, - |
1.55e-98 | FFCP PHASE1:Hg19::chr3:192598433..192598481,-#_436f6b1d0291644c9de12c89649651a9 | p@chr3:192598433..192598481, - |
1.55e-98 | FFCP PHASE1:Hg19::chrX:133321044..133321049,+#_436f6b1d0291644c9de12c89649651a9 | p@chrX:133321044..133321049, + |
1.55e-98 | FFCP PHASE2:Hg19::chr2:141989111..141989114,-#_436f6b1d0291644c9de12c89649651a9 | p@chr2:141989111..141989114, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:175842470..175842486,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175842470..175842486, - |
1.55e-98 | FFCP PHASE1:Hg19::chr14:22962827..22962830,+#_436f6b1d0291644c9de12c89649651a9 | p3@uc001weo.2 |
1.55e-98 | FFCP PHASE1:Hg19::chr21:43982135..43982142,+#_436f6b1d0291644c9de12c89649651a9 | p@chr21:43982135..43982142, + |
1.55e-98 | FFCP PHASE2:Hg19::chr5:24272119..24272147,-#_436f6b1d0291644c9de12c89649651a9 | p@chr5:24272119..24272147, - |
1.55e-98 | FFCP PHASE1:Hg19::chr21:39490932..39490937,+#_436f6b1d0291644c9de12c89649651a9 | p@chr21:39490932..39490937, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:111448516..111448521,+#_436f6b1d0291644c9de12c89649651a9 | p@chr4:111448516..111448521, + |
1.55e-98 | FFCP PHASE2:Hg19::chr3:192598433..192598481,-#_436f6b1d0291644c9de12c89649651a9 | p@chr3:192598433..192598481, - |
1.55e-98 | FFCP PHASE2:Hg19::chr8:50081052..50081075,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:50081052..50081075, - |
1.55e-98 | FFCP PHASE2:Hg19::chr13:24623546..24623587,-#_436f6b1d0291644c9de12c89649651a9 | p@chr13:24623546..24623587, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:2428062..2428080,+#_436f6b1d0291644c9de12c89649651a9 | p1@uc003gfa.1 |
1.55e-98 | FFCP PHASE1:Hg19::chr8:67519931..67519935,-#_436f6b1d0291644c9de12c89649651a9 | p@chr8:67519931..67519935, - |
1.55e-98 | FFCP PHASE2:Hg19::chr2:146998057..146998070,-#_436f6b1d0291644c9de12c89649651a9 | p@chr2:146998057..146998070, - |
1.55e-98 | FFCP PHASE2:Hg19::chrX:133321044..133321049,+#_436f6b1d0291644c9de12c89649651a9 | p@chrX:133321044..133321049, + |
1.55e-98 | FFCP PHASE2:Hg19::chr4:176123823..176123829,+#_436f6b1d0291644c9de12c89649651a9 | p@chr4:176123823..176123829, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:133657651..133657654,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:133657651..133657654, - |
1.55e-98 | FFCP PHASE1:Hg19::chr15:91989101..91989105,+#_436f6b1d0291644c9de12c89649651a9 | p@chr15:91989101..91989105, + |
1.55e-98 | FFCP PHASE1:Hg19::chr3:152204326..152204345,+#_436f6b1d0291644c9de12c89649651a9 | p@chr3:152204326..152204345, + |
1.55e-98 | FFCP PHASE1:Hg19::chr16:67022368..67022374,-#_436f6b1d0291644c9de12c89649651a9 | p@chr16:67022368..67022374, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:134707474..134707504,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:134707474..134707504, - |
1.55e-98 | FFCP PHASE2:Hg19::chr7:117926347..117926353,-#_436f6b1d0291644c9de12c89649651a9 | p@chr7:117926347..117926353, - |
1.55e-98 | FFCP PHASE2:Hg19::chr9:72117884..72117889,-#_436f6b1d0291644c9de12c89649651a9 | p@chr9:72117884..72117889, - |
1.55e-98 | FFCP PHASE1:Hg19::chr1:200990231..200990238,-#_436f6b1d0291644c9de12c89649651a9 | p@chr1:200990231..200990238, - |
1.55e-98 | FFCP PHASE2:Hg19::chr4:133657589..133657598,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:133657589..133657598, - |
1.55e-98 | FFCP PHASE1:Hg19::chr17:14103251..14103258,+#_436f6b1d0291644c9de12c89649651a9 | p@chr17:14103251..14103258, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:105805755..105805761,+#_436f6b1d0291644c9de12c89649651a9 | p@chr4:105805755..105805761, + |
1.55e-98 | FFCP PHASE1:Hg19::chr8:75251775..75251785,+#_436f6b1d0291644c9de12c89649651a9 | p@chr8:75251775..75251785, + |
1.55e-98 | FFCP PHASE1:Hg19::chr4:175842537..175842553,-#_436f6b1d0291644c9de12c89649651a9 | p@chr4:175842537..175842553, - |