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UBERON:0001154

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Name:vermiform appendix
Namespace:FANTOM
Definition:"Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix[FMA]. a narrowed, thickened, lymphoid-rich caecal apex [Fisher 2000]." [FMA:14542, Wikipedia:Vermiform_appendix]
Xrefs:
links:

BTO:0000084
EFO:0000849
EHDAA2:0000588
EV:0100076
EV:0100080
FMA:14542
GAID:308
galen:AppendixVermiformis
[ Gray536.png Gray536.png]
[ 200px-Gray536.png 200px-Gray536.png]
MA:0001540
MAT:0000287
MESH:A.03.492.411.495.209.290
MIAA:0000287
ncithesaurus:Vermiform_Appendix
OpenCyc:Mx4rvVjGgJwpEbGdrcN5Y29ycA
SCTID:181255000

VHOG:0001306
Synonyms: "apex of cecum" RELATED []
"appendix vermiformis" EXACT [FMA:14542, FMA:TA]
"appendix vermiformis" RELATED LATIN [Wikipedia:Vermiform_appendix]
"caecal appendix" EXACT []
"vermiform appendix" EXACT []
"vermix" EXACT []
Alt_id: UBERON:FMA_14542-MA_0001540-MIAA_0000287
Subset: organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0013765(digestive system element)
develops_from:UBERON:0001045(midgut)
part_of:UBERON:0001153(caecum),UBERON:0004907(lower digestive tract)



Children

derives from:FF:0010189 (human appendix - adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001154 (vermiform appendix), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data