UBERON:0001154
From FANTOM5_SSTAR
Name: | vermiform appendix | |
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Namespace: | FANTOM | |
Definition: | "Organ with organ cavity which is continuous proximally with the cecum and distally terminates in the tip of the appendix[FMA]. a narrowed, thickened, lymphoid-rich caecal apex [Fisher 2000]." [FMA:14542, Wikipedia:Vermiform_appendix] | |
Xrefs: |
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Synonyms: |
"apex of cecum" RELATED [] "appendix vermiformis" EXACT [FMA:14542, FMA:TA] "appendix vermiformis" RELATED LATIN [Wikipedia:Vermiform_appendix] "caecal appendix" EXACT [] "vermiform appendix" EXACT [] "vermix" EXACT [] | |
Alt_id: | UBERON:FMA_14542-MA_0001540-MIAA_0000287 | |
Subset: |
organ_slim uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0013765(digestive system element) |
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develops_from: | UBERON:0001045(midgut) |
part_of: | UBERON:0001153(caecum),UBERON:0004907(lower digestive tract) |
Children
derives from: | FF:0010189 (human appendix - adult sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10189-103D9 (appendix, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001154 (vermiform appendix), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data