UBERON:0001473
From FANTOM5_SSTAR
| Name: | lymphatic vessel | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A vessel that contains or conveys lymph, that originates as an interfibrillar or intercellular cleft or space in a tissue or organ, and that if small has no distinct walls or walls composed only of endothelial cells and if large resembles a vein in structure[BTO]." [BTO:0000752, Wikipedia:Lymphatic_vessel] | ||
| Xrefs: |
| ||
| Synonyms: |
"lymph vessel" EXACT [] "vas lymphaticum" RELATED LATIN [Wikipedia:Lymphatic_vessel] | ||
| Alt_id: | UBERON:FMA_30315-FMA_5034-MA_0000138-MA_0000139-MIAA_0000197-XAO_0000375-ZFA_0005105 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000055(vessel) |
|---|---|
| disjoint_from: | UBERON:0001981(blood vessel) |
| part_of: | UBERON:0004536(lymph vasculature),UBERON:0006558(lymphatic part of lymphoid system) |
Children
| part of: | CL:0002138 (endothelial cell of lymphatic vessel),CL:0002554 (fibroblast of lymphatic vessel) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
- 11393-118C7 (Endothelial Cells - Lymphatic, donor3)
- 11506-119G3 (Fibroblast - Lymphatic, donor1)
- 11586-120G2 (Fibroblast - Lymphatic, donor2)
- 11638-122C9
- 11667-122G2 (Fibroblast - Lymphatic, donor3)
- 11715-123C5
- 11733-123E5
- 12260-130A1 (Lymphatic Endothelial cells response to VEGFC)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001473 (lymphatic vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.05e-102 | FFCP PHASE1:Hg19::chr9:13432964..13432971,-#_b0da3c5270919cc8b8b5c331ce4489db | p@chr9:13432964..13432971, - |
| 5.05e-102 | FFCP PHASE2:Hg19::chr9:13432964..13432971,-#_b0da3c5270919cc8b8b5c331ce4489db | p@chr9:13432964..13432971, - |
| 4.74e-79 | FFCP PHASE1:Hg19::chr1:65344872..65344880,-#_9b123895fc8a30fecdac24ff4c045c65 | p15@JAK1 |
| 4.74e-79 | FFCP PHASE2:Hg19::chr1:65344872..65344880,-#_9b123895fc8a30fecdac24ff4c045c65 | p15@JAK1 |
| 1.08e-76 | FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_a40f37cebdcf9c01c13767036ad3fcfd | p@chr3:30560368..30560379, + |
| 1.08e-76 | FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_a40f37cebdcf9c01c13767036ad3fcfd | p@chr3:30560368..30560379, + |
| 6.73e-74 | FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_216540668d2afd258bb99051e0f2339c | p@chr17:28534912..28534942, - |
| 6.73e-74 | FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_216540668d2afd258bb99051e0f2339c | p@chr17:28534912..28534942, - |
| 2.1e-68 | FFCP PHASE1:Hg19::chr2:56149881..56149899,-#_48933b1a96f108782f7e2725dc832fa6 | p14@EFEMP1 |
| 2.1e-68 | FFCP PHASE2:Hg19::chr2:56149881..56149899,-#_48933b1a96f108782f7e2725dc832fa6 | p14@EFEMP1 |
| 1.18e-65 | FFCP PHASE1:Hg19::chr19:48613876..48613886,-#_5e935c619f8913021070ac5d34795f20 | p7@PLA2G4C |
| 1.18e-65 | FFCP PHASE2:Hg19::chr19:48613876..48613886,-#_5e935c619f8913021070ac5d34795f20 | p7@PLA2G4C |
| 3.64e-64 | FFCP PHASE1:Hg19::chr6:74848034..74848043,+#_1a1897af2f4a990b66de8db131b805af | p@chr6:74848034..74848043, + |
| 3.64e-64 | FFCP PHASE2:Hg19::chr6:74848034..74848043,+#_1a1897af2f4a990b66de8db131b805af | p@chr6:74848034..74848043, + |
| 6.87e-57 | FFCP PHASE1:Hg19::chr6:5054373..5054392,-#_ab4700e5d238d17fa5a754d35ce3c8fc | p1@AK126470 |
| 6.87e-57 | FFCP PHASE2:Hg19::chr6:5054373..5054392,-#_ab4700e5d238d17fa5a754d35ce3c8fc | p1@AK126470 |
| 9.15e-57 | FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_e39ee3e40e109e59d96379e0f623be65 | p25@CD36 |
| 9.15e-57 | FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_e39ee3e40e109e59d96379e0f623be65 | p25@CD36 |
| 1.06e-56 | FFCP PHASE1:Hg19::chr3:145968441..145968451,-#_e05761710d59728963da5680ab144a24 | p17@PLSCR4 |
| 1.06e-56 | FFCP PHASE2:Hg19::chr3:145968441..145968451,-#_e05761710d59728963da5680ab144a24 | p17@PLSCR4 |
| 1.22e-56 | FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_f6b9637c5137fe327094b1c395153d50 | p17@RASGRP3 |
| 1.22e-56 | FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_f6b9637c5137fe327094b1c395153d50 | p17@RASGRP3 |
| 1.41e-56 | FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_7d9d0f04c71fafb5dd2316e337ef8861 | p2@ENST00000428006 |
| 1.41e-56 | FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_7d9d0f04c71fafb5dd2316e337ef8861 | p2@ENST00000428006 |
| 4.57e-56 | FFCP PHASE2:Hg19::chr17:28534879..28534889,-#_7c69fa12c8098d7ce18a39f392837f26 | p@chr17:28534879..28534889, - |
| 4.57e-56 | FFCP PHASE2:Hg19::chr12:46807404..46807413,+#_7c69fa12c8098d7ce18a39f392837f26 | p@chr12:46807404..46807413, + |
| 4.57e-56 | FFCP PHASE1:Hg19::chr17:28534879..28534889,-#_7c69fa12c8098d7ce18a39f392837f26 | p@chr17:28534879..28534889, - |
| 4.57e-56 | FFCP PHASE1:Hg19::chr12:46807404..46807413,+#_7c69fa12c8098d7ce18a39f392837f26 | p@chr12:46807404..46807413, + |
| 6.66e-56 | FFCP PHASE1:Hg19::chr7:79998905..79998917,+#_44aaebbcaa8f1ff95cde992ad9861126 | p26@CD36 |
| 6.66e-56 | FFCP PHASE2:Hg19::chr7:79998905..79998917,+#_44aaebbcaa8f1ff95cde992ad9861126 | p26@CD36 |
| 2.32e-54 | FFCP PHASE2:Hg19::chr8:30300216..30300245,+#_4915e22e0732ec2620e99cdacbf6f9b6 | p10@RBPMS |
| 2.32e-54 | FFCP PHASE1:Hg19::chr8:30300216..30300245,+#_4915e22e0732ec2620e99cdacbf6f9b6 | p10@RBPMS |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:75873825..75873826,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr17:75873825..75873826, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:108794429..108794441,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794429..108794441, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr4:114238344..114238353,+#_33d233b9adeb6b47b025f5c3e10358f3 | p58@ANK2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr4:114238344..114238353,+#_33d233b9adeb6b47b025f5c3e10358f3 | p58@ANK2 |
| 3.99e-50 | FFCP PHASE1:Hg19::chr1:66723029..66723041,+#_33d233b9adeb6b47b025f5c3e10358f3 | p54@PDE4B |
| 3.99e-50 | FFCP PHASE2:Hg19::chr1:66723029..66723041,+#_33d233b9adeb6b47b025f5c3e10358f3 | p54@PDE4B |
| 3.99e-50 | FFCP PHASE1:Hg19::chr2:33661526..33661535,+#_33d233b9adeb6b47b025f5c3e10358f3 | p23@RASGRP3 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr2:33661526..33661535,+#_33d233b9adeb6b47b025f5c3e10358f3 | p23@RASGRP3 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:108794408..108794422,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794408..108794422, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr11:108794408..108794422,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794408..108794422, + |
| 3.99e-50 | FFCP PHASE2:Hg19::chr11:108794429..108794441,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr11:108794429..108794441, + |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:75873825..75873826,+#_33d233b9adeb6b47b025f5c3e10358f3 | p@chr17:75873825..75873826, + |
| 9.58e-48 | FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_0c3fbfaddf62fad60cda61850c35951e | p@chr4:189881560..189881604, - |
| 9.58e-48 | FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_0c3fbfaddf62fad60cda61850c35951e | p@chr4:189881560..189881604, - |
| 1.55e-47 | FFCP PHASE1:Hg19::chr4:90857427..90857438,+#_6b5e3bac26c72cd9a2d1ad57cb8f76a5 | p@chr4:90857427..90857438, + |
| 1.55e-47 | FFCP PHASE2:Hg19::chr4:90857427..90857438,+#_6b5e3bac26c72cd9a2d1ad57cb8f76a5 | p@chr4:90857427..90857438, + |
| 1.71e-47 | FFCP PHASE2:Hg19::chr10:4823152..4823165,-#_a94d66a755313bbf6a71a06e9e704399 | p@chr10:4823152..4823165, - |
| 1.71e-47 | FFCP PHASE1:Hg19::chr10:4823152..4823165,-#_a94d66a755313bbf6a71a06e9e704399 | p@chr10:4823152..4823165, - |
| 3.05e-47 | FFCP PHASE1:Hg19::chr6:49534004..49534016,+#_66f1475ca6e56ca9a3a0d8a0f8ab9b83 | p@chr6:49534004..49534016, + |
| 3.05e-47 | FFCP PHASE2:Hg19::chr6:49534004..49534016,+#_66f1475ca6e56ca9a3a0d8a0f8ab9b83 | p@chr6:49534004..49534016, + |
| 7.08e-47 | FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_774c9ec08928917759aa000d38205f22 | p@chr12:96841308..96841312, + |
| 7.08e-47 | FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_774c9ec08928917759aa000d38205f22 | p@chr12:96841308..96841312, + |
| 3.73e-45 | FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_a24165d82f288bd195b0197e407e366c | p6@HYI |
| 3.73e-45 | FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_a24165d82f288bd195b0197e407e366c | p6@HYI |
| 4.34e-45 | FFCP PHASE1:Hg19::chr3:34262215..34262222,+#_e8de854ebce651115028ee18b4731f10 | p@chr3:34262215..34262222, + |
| 4.34e-45 | FFCP PHASE2:Hg19::chr3:34262215..34262222,+#_e8de854ebce651115028ee18b4731f10 | p@chr3:34262215..34262222, + |
| 5.04e-45 | FFCP PHASE1:Hg19::chr18:54339814..54339822,+#_82c5782696cccd3d99c342072db59cd2 | p7@WDR7 |
| 5.04e-45 | FFCP PHASE2:Hg19::chr18:54339814..54339822,+#_82c5782696cccd3d99c342072db59cd2 | p7@WDR7 |
| 6.81e-45 | FFCP PHASE1:Hg19::chr7:10196589..10196595,-#_ff87b515eec7b4a61826733d07347632 | p@chr7:10196589..10196595, - |
| 6.81e-45 | FFCP PHASE2:Hg19::chr7:10196589..10196595,-#_ff87b515eec7b4a61826733d07347632 | p@chr7:10196589..10196595, - |
| 7.92e-45 | FFCP PHASE1:Hg19::chr2:62705562..62705579,+#_3f5968e6dfa5f3fa3bd13787feb6f9c6 | p@chr2:62705562..62705579, + |
| 7.92e-45 | FFCP PHASE2:Hg19::chr2:62705562..62705579,+#_3f5968e6dfa5f3fa3bd13787feb6f9c6 | p@chr2:62705562..62705579, + |
| 3.69e-44 | FFCP PHASE2:Hg19::chr12:71031281..71031292,-#_657e7ea1f19ccb6ffec237be719bbfd7 | p12@PTPRB |
| 3.69e-44 | FFCP PHASE1:Hg19::chr12:71031281..71031292,-#_657e7ea1f19ccb6ffec237be719bbfd7 | p12@PTPRB |
| 3.69e-44 | FFCP PHASE1:Hg19::chr4:90856951..90856962,+#_657e7ea1f19ccb6ffec237be719bbfd7 | p@chr4:90856951..90856962, + |
| 3.69e-44 | FFCP PHASE2:Hg19::chr4:90856951..90856962,+#_657e7ea1f19ccb6ffec237be719bbfd7 | p@chr4:90856951..90856962, + |
| 3.18e-40 | FFCP PHASE2:Hg19::chr12:105882068..105882076,+#_3063c1b80fb4aa409af5e85c8041be42 | p@chr12:105882068..105882076, + |
| 3.18e-40 | FFCP PHASE1:Hg19::chr12:105882068..105882076,+#_3063c1b80fb4aa409af5e85c8041be42 | p@chr12:105882068..105882076, + |
| 3.89e-40 | FFCP PHASE1:Hg19::chr8:6459787..6459796,+#_9683dbb41cd8cf47d452080885c2c770 | p@chr8:6459787..6459796, + |
| 3.89e-40 | FFCP PHASE2:Hg19::chr8:6459787..6459796,+#_9683dbb41cd8cf47d452080885c2c770 | p@chr8:6459787..6459796, + |
| 1.55e-39 | FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_3f0d94d5c4d805ddc01ad542d7065484 | p@chr4:38057595..38057624, - |
| 1.55e-39 | FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_3f0d94d5c4d805ddc01ad542d7065484 | p@chr4:38057595..38057624, - |
| 6.2e-39 | FFCP PHASE1:Hg19::chr3:194868639..194868654,+#_cc242f9a7f86bcbcd50776105ab9c9a0 | p1@ENST00000426468 |
| 6.2e-39 | FFCP PHASE2:Hg19::chr3:194868639..194868654,+#_cc242f9a7f86bcbcd50776105ab9c9a0 | p1@ENST00000426468 |
| 9.18e-38 | FFCP PHASE2:Hg19::chr8:16425014..16425019,-#_0b8be2d80cf587dedd73f8b0b05ee2b6 | p13@MSR1 |
| 9.18e-38 | FFCP PHASE1:Hg19::chr8:16425014..16425019,-#_0b8be2d80cf587dedd73f8b0b05ee2b6 | p13@MSR1 |
| 1.51e-37 | FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_acd3898d41f591d5f16ba6799d983294 | p3@LOC441179 |
| 1.51e-37 | FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_acd3898d41f591d5f16ba6799d983294 | p3@LOC441179 |
| 1.95e-37 | FFCP PHASE1:Hg19::chr2:27487913..27487933,-#_0644ba878c78a983eb041597f377a062 | p@chr2:27487913..27487933, - |
| 1.95e-37 | FFCP PHASE2:Hg19::chr2:27487913..27487933,-#_0644ba878c78a983eb041597f377a062 | p@chr2:27487913..27487933, - |
| 5.85e-37 | FFCP PHASE1:Hg19::chr8:6420777..6420779,-#_4bd52bb53b90b4d6c22589a9d11cb3b2 | p5@ANGPT2 |
| 5.85e-37 | FFCP PHASE2:Hg19::chr8:6420777..6420779,-#_4bd52bb53b90b4d6c22589a9d11cb3b2 | p5@ANGPT2 |
| 1.23e-36 | FFCP PHASE1:Hg19::chr6:168195926..168195943,+#_7c45e301ab0db7c4142d54663367033e | p1@LOC441179 |
| 1.23e-36 | FFCP PHASE2:Hg19::chr6:168195926..168195943,+#_7c45e301ab0db7c4142d54663367033e | p1@LOC441179 |
| 1.33e-36 | FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_9e60badab6ac6a881883c81177258b15 | p8@EXOC6 |
| 1.33e-36 | FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_9e60badab6ac6a881883c81177258b15 | p8@EXOC6 |
| 5.59e-36 | FFCP PHASE2:Hg19::chr8:16425043..16425061,-#_a9cd0ab17c61ae3b6c7ef311b3be3d4b | p5@MSR1 |
| 5.59e-36 | FFCP PHASE1:Hg19::chr8:16425043..16425061,-#_a9cd0ab17c61ae3b6c7ef311b3be3d4b | p5@MSR1 |
| 1.86e-34 | FFCP PHASE1:Hg19::chr17:79426425..79426444,+#_2bc8d45d843feca748efa0983defc651 | p@chr17:79426425..79426444, + |
| 1.86e-34 | FFCP PHASE2:Hg19::chr17:79426425..79426444,+#_2bc8d45d843feca748efa0983defc651 | p@chr17:79426425..79426444, + |
| 3.14e-34 | FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_82d34aebe64357d2db2e9f514b82b917 | p@chr11:57543275..57543296, + |
| 3.14e-34 | FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_82d34aebe64357d2db2e9f514b82b917 | p@chr11:57543275..57543296, + |
| 2.31e-33 | FFCP PHASE1:Hg19::chr19:45226133..45226157,-#_c8be5d8d4d25c6612d9beb34cb851c46 | p@chr19:45226133..45226157, - |
| 2.31e-33 | FFCP PHASE2:Hg19::chr19:45226133..45226157,-#_c8be5d8d4d25c6612d9beb34cb851c46 | p@chr19:45226133..45226157, - |
| 2.61e-33 | FFCP PHASE1:Hg19::chr3:159570877..159570888,+#_f3d251d62a727e9d8b0b663f947f3359 | p43@SCHIP1 |
| 2.61e-33 | FFCP PHASE2:Hg19::chr3:159570877..159570888,+#_f3d251d62a727e9d8b0b663f947f3359 | p43@SCHIP1 |
| 7.63e-33 | FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_8f9bd7ae89bd7f18c4f4dd56cfa6b188 | p10@PTPRB |
| 7.63e-33 | FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_8f9bd7ae89bd7f18c4f4dd56cfa6b188 | p10@PTPRB |
Property "Property value" (as page type) with input value "UBPROP:0000001 "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "A vessel that contains or conveys lymph.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
