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UBERON:0006558

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Name:lymphatic part of lymphoid system
Namespace:FANTOM
Xrefs:
links:

AAO:0010522
EFO:0000870
EMAPA:18248
FMA:7162
MA:0002961
MESH:A.15.382.520

SCTID:362597000
Synonyms: "lymphatic system" EXACT [FMA:7162, MA:0002435]
"lymphatic tree system" EXACT [FMA:7162]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000477(anatomical cluster)
part_of:UBERON:0001009(circulatory system),UBERON:0002465(lymphoid system),UBERON:0007798(vascular system)



Children

part of:UBERON:0001473 (lymphatic vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006558 (lymphatic part of lymphoid system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.05e-102FFCP PHASE1:Hg19::chr9:13432964..13432971,-#_45fa98923a5b178cae4150f760f59034p@chr9:13432964..13432971, -
5.05e-102FFCP PHASE2:Hg19::chr9:13432964..13432971,-#_45fa98923a5b178cae4150f760f59034p@chr9:13432964..13432971, -
4.74e-79FFCP PHASE1:Hg19::chr1:65344872..65344880,-#_ce8ff4a6ac0e20cc9135fa073bdba9f8p15@JAK1
4.74e-79FFCP PHASE2:Hg19::chr1:65344872..65344880,-#_ce8ff4a6ac0e20cc9135fa073bdba9f8p15@JAK1
1.08e-76FFCP PHASE1:Hg19::chr3:30560368..30560379,+#_4a6e6900a1a858b4135da603c138fae8p@chr3:30560368..30560379, +
1.08e-76FFCP PHASE2:Hg19::chr3:30560368..30560379,+#_4a6e6900a1a858b4135da603c138fae8p@chr3:30560368..30560379, +
6.73e-74FFCP PHASE1:Hg19::chr17:28534912..28534942,-#_d0ecbc8e069a2c226e4fef0add5fd0dbp@chr17:28534912..28534942, -
6.73e-74FFCP PHASE2:Hg19::chr17:28534912..28534942,-#_d0ecbc8e069a2c226e4fef0add5fd0dbp@chr17:28534912..28534942, -
2.1e-68FFCP PHASE1:Hg19::chr2:56149881..56149899,-#_20fba18950713e64268a4574654f802ap14@EFEMP1
2.1e-68FFCP PHASE2:Hg19::chr2:56149881..56149899,-#_20fba18950713e64268a4574654f802ap14@EFEMP1
1.18e-65FFCP PHASE1:Hg19::chr19:48613876..48613886,-#_cfd2d45f7f5158b35a1a152fca2594b9p7@PLA2G4C
1.18e-65FFCP PHASE2:Hg19::chr19:48613876..48613886,-#_cfd2d45f7f5158b35a1a152fca2594b9p7@PLA2G4C
3.64e-64FFCP PHASE1:Hg19::chr6:74848034..74848043,+#_be964c56bffde13dc90dbaad0e5d1d90p@chr6:74848034..74848043, +
3.64e-64FFCP PHASE2:Hg19::chr6:74848034..74848043,+#_be964c56bffde13dc90dbaad0e5d1d90p@chr6:74848034..74848043, +
6.87e-57FFCP PHASE1:Hg19::chr6:5054373..5054392,-#_edbfa038f5362900785c6ed0635e6a75p1@AK126470
6.87e-57FFCP PHASE2:Hg19::chr6:5054373..5054392,-#_edbfa038f5362900785c6ed0635e6a75p1@AK126470
9.15e-57FFCP PHASE1:Hg19::chr7:79998842..79998855,+#_8509c8c0dcccd79c32552c63755a1f8ep25@CD36
9.15e-57FFCP PHASE2:Hg19::chr7:79998842..79998855,+#_8509c8c0dcccd79c32552c63755a1f8ep25@CD36
1.06e-56FFCP PHASE1:Hg19::chr3:145968441..145968451,-#_71fd12a2e5c34bc99282b4359e3c1a8dp17@PLSCR4
1.06e-56FFCP PHASE2:Hg19::chr3:145968441..145968451,-#_71fd12a2e5c34bc99282b4359e3c1a8dp17@PLSCR4
1.22e-56FFCP PHASE1:Hg19::chr2:33661536..33661549,+#_12cacb4ae6e628888fd167050b8e75bfp17@RASGRP3
1.22e-56FFCP PHASE2:Hg19::chr2:33661536..33661549,+#_12cacb4ae6e628888fd167050b8e75bfp17@RASGRP3
1.41e-56FFCP PHASE1:Hg19::chr9:13446440..13446456,+#_1b9015ca0f3ac8bc2ba595c9af37e04ap2@ENST00000428006
1.41e-56FFCP PHASE2:Hg19::chr9:13446440..13446456,+#_1b9015ca0f3ac8bc2ba595c9af37e04ap2@ENST00000428006
4.57e-56FFCP PHASE1:Hg19::chr12:46807404..46807413,+#_5d250e1aafed1efecb4f5f820118f20ap@chr12:46807404..46807413, +
4.57e-56FFCP PHASE1:Hg19::chr17:28534879..28534889,-#_5d250e1aafed1efecb4f5f820118f20ap@chr17:28534879..28534889, -
4.57e-56FFCP PHASE2:Hg19::chr17:28534879..28534889,-#_5d250e1aafed1efecb4f5f820118f20ap@chr17:28534879..28534889, -
4.57e-56FFCP PHASE2:Hg19::chr12:46807404..46807413,+#_5d250e1aafed1efecb4f5f820118f20ap@chr12:46807404..46807413, +
6.66e-56FFCP PHASE1:Hg19::chr7:79998905..79998917,+#_277d81d3cd7e0679ac96d79660c6c9a7p26@CD36
6.66e-56FFCP PHASE2:Hg19::chr7:79998905..79998917,+#_277d81d3cd7e0679ac96d79660c6c9a7p26@CD36
2.32e-54FFCP PHASE1:Hg19::chr8:30300216..30300245,+#_d0324a4b5f02b670d54b55741a8f1ebfp10@RBPMS
2.32e-54FFCP PHASE2:Hg19::chr8:30300216..30300245,+#_d0324a4b5f02b670d54b55741a8f1ebfp10@RBPMS
3.99e-50FFCP PHASE2:Hg19::chr17:75873825..75873826,+#_6042600524dd555373bc12baff5f24bbp@chr17:75873825..75873826, +
3.99e-50FFCP PHASE1:Hg19::chr4:114238344..114238353,+#_6042600524dd555373bc12baff5f24bbp58@ANK2
3.99e-50FFCP PHASE2:Hg19::chr4:114238344..114238353,+#_6042600524dd555373bc12baff5f24bbp58@ANK2
3.99e-50FFCP PHASE2:Hg19::chr11:108794429..108794441,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794429..108794441, +
3.99e-50FFCP PHASE1:Hg19::chr2:33661526..33661535,+#_6042600524dd555373bc12baff5f24bbp23@RASGRP3
3.99e-50FFCP PHASE2:Hg19::chr2:33661526..33661535,+#_6042600524dd555373bc12baff5f24bbp23@RASGRP3
3.99e-50FFCP PHASE1:Hg19::chr1:66723029..66723041,+#_6042600524dd555373bc12baff5f24bbp54@PDE4B
3.99e-50FFCP PHASE2:Hg19::chr1:66723029..66723041,+#_6042600524dd555373bc12baff5f24bbp54@PDE4B
3.99e-50FFCP PHASE1:Hg19::chr11:108794408..108794422,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794408..108794422, +
3.99e-50FFCP PHASE1:Hg19::chr11:108794429..108794441,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794429..108794441, +
3.99e-50FFCP PHASE2:Hg19::chr11:108794408..108794422,+#_6042600524dd555373bc12baff5f24bbp@chr11:108794408..108794422, +
3.99e-50FFCP PHASE1:Hg19::chr17:75873825..75873826,+#_6042600524dd555373bc12baff5f24bbp@chr17:75873825..75873826, +
9.58e-48FFCP PHASE1:Hg19::chr4:189881560..189881604,-#_b42485ad34e23888598cc78c52738978p@chr4:189881560..189881604, -
9.58e-48FFCP PHASE2:Hg19::chr4:189881560..189881604,-#_b42485ad34e23888598cc78c52738978p@chr4:189881560..189881604, -
1.55e-47FFCP PHASE1:Hg19::chr4:90857427..90857438,+#_4cfa9fca89b36449f8fa5529a0296195p@chr4:90857427..90857438, +
1.55e-47FFCP PHASE2:Hg19::chr4:90857427..90857438,+#_4cfa9fca89b36449f8fa5529a0296195p@chr4:90857427..90857438, +
1.71e-47FFCP PHASE2:Hg19::chr10:4823152..4823165,-#_5b8e2738e9a35cf12c0c36c546602cf5p@chr10:4823152..4823165, -
1.71e-47FFCP PHASE1:Hg19::chr10:4823152..4823165,-#_5b8e2738e9a35cf12c0c36c546602cf5p@chr10:4823152..4823165, -
3.05e-47FFCP PHASE1:Hg19::chr6:49534004..49534016,+#_cc05023be04198997c99753de38cf74ep@chr6:49534004..49534016, +
3.05e-47FFCP PHASE2:Hg19::chr6:49534004..49534016,+#_cc05023be04198997c99753de38cf74ep@chr6:49534004..49534016, +
7.08e-47FFCP PHASE2:Hg19::chr12:96841308..96841312,+#_50c23a794c2b2e104c40d40e1118121bp@chr12:96841308..96841312, +
7.08e-47FFCP PHASE1:Hg19::chr12:96841308..96841312,+#_50c23a794c2b2e104c40d40e1118121bp@chr12:96841308..96841312, +
3.73e-45FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_ab1dcfa23a4da1556ef0937e319b7b9dp6@HYI
3.73e-45FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_ab1dcfa23a4da1556ef0937e319b7b9dp6@HYI
4.34e-45FFCP PHASE1:Hg19::chr3:34262215..34262222,+#_e553453b4f7b70a98e383cca073c85d8p@chr3:34262215..34262222, +
4.34e-45FFCP PHASE2:Hg19::chr3:34262215..34262222,+#_e553453b4f7b70a98e383cca073c85d8p@chr3:34262215..34262222, +
5.04e-45FFCP PHASE1:Hg19::chr18:54339814..54339822,+#_86936fed7cadb22e78696f8857635b49p7@WDR7
5.04e-45FFCP PHASE2:Hg19::chr18:54339814..54339822,+#_86936fed7cadb22e78696f8857635b49p7@WDR7
6.81e-45FFCP PHASE1:Hg19::chr7:10196589..10196595,-#_654f3abc9f8d73da9ec30a8e66c407c1p@chr7:10196589..10196595, -
6.81e-45FFCP PHASE2:Hg19::chr7:10196589..10196595,-#_654f3abc9f8d73da9ec30a8e66c407c1p@chr7:10196589..10196595, -
7.92e-45FFCP PHASE1:Hg19::chr2:62705562..62705579,+#_b98328728baba1972d1f016141d81598p@chr2:62705562..62705579, +
7.92e-45FFCP PHASE2:Hg19::chr2:62705562..62705579,+#_b98328728baba1972d1f016141d81598p@chr2:62705562..62705579, +
3.69e-44FFCP PHASE2:Hg19::chr12:71031281..71031292,-#_b75a67be1391248f6dac7595427bbffap12@PTPRB
3.69e-44FFCP PHASE1:Hg19::chr4:90856951..90856962,+#_b75a67be1391248f6dac7595427bbffap@chr4:90856951..90856962, +
3.69e-44FFCP PHASE2:Hg19::chr4:90856951..90856962,+#_b75a67be1391248f6dac7595427bbffap@chr4:90856951..90856962, +
3.69e-44FFCP PHASE1:Hg19::chr12:71031281..71031292,-#_b75a67be1391248f6dac7595427bbffap12@PTPRB
3.18e-40FFCP PHASE1:Hg19::chr12:105882068..105882076,+#_72fb3f9dbe47f510df213ad7dbd967f6p@chr12:105882068..105882076, +
3.18e-40FFCP PHASE2:Hg19::chr12:105882068..105882076,+#_72fb3f9dbe47f510df213ad7dbd967f6p@chr12:105882068..105882076, +
3.89e-40FFCP PHASE1:Hg19::chr8:6459787..6459796,+#_4a09e67fb22b9cb1a4410d9aadb16365p@chr8:6459787..6459796, +
3.89e-40FFCP PHASE2:Hg19::chr8:6459787..6459796,+#_4a09e67fb22b9cb1a4410d9aadb16365p@chr8:6459787..6459796, +
1.55e-39FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_666f24a397c8bc586ac8a2d66fd738f6p@chr4:38057595..38057624, -
1.55e-39FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_666f24a397c8bc586ac8a2d66fd738f6p@chr4:38057595..38057624, -
6.2e-39FFCP PHASE1:Hg19::chr3:194868639..194868654,+#_dc41b81435e4fcd1f7745e4478418413p1@ENST00000426468
6.2e-39FFCP PHASE2:Hg19::chr3:194868639..194868654,+#_dc41b81435e4fcd1f7745e4478418413p1@ENST00000426468
9.18e-38FFCP PHASE1:Hg19::chr8:16425014..16425019,-#_1568884d8c491a18e307046f6157c3cap13@MSR1
9.18e-38FFCP PHASE2:Hg19::chr8:16425014..16425019,-#_1568884d8c491a18e307046f6157c3cap13@MSR1
1.51e-37FFCP PHASE2:Hg19::chr6:168195978..168195989,+#_6f12ebf8ef31bad1c4b539a959091ea1p3@LOC441179
1.51e-37FFCP PHASE1:Hg19::chr6:168195978..168195989,+#_6f12ebf8ef31bad1c4b539a959091ea1p3@LOC441179
1.95e-37FFCP PHASE1:Hg19::chr2:27487913..27487933,-#_cdef6e90988680a54aa60f55af43544ep@chr2:27487913..27487933, -
1.95e-37FFCP PHASE2:Hg19::chr2:27487913..27487933,-#_cdef6e90988680a54aa60f55af43544ep@chr2:27487913..27487933, -
5.85e-37FFCP PHASE1:Hg19::chr8:6420777..6420779,-#_245c3413c2e6ac3c0c2ec5eeb6fc0139p5@ANGPT2
5.85e-37FFCP PHASE2:Hg19::chr8:6420777..6420779,-#_245c3413c2e6ac3c0c2ec5eeb6fc0139p5@ANGPT2
1.23e-36FFCP PHASE1:Hg19::chr6:168195926..168195943,+#_0cb5d1ae6a9374d65663d546629df65bp1@LOC441179
1.23e-36FFCP PHASE2:Hg19::chr6:168195926..168195943,+#_0cb5d1ae6a9374d65663d546629df65bp1@LOC441179
1.33e-36FFCP PHASE2:Hg19::chr10:94590895..94590905,+#_b13f635adf67a2923e1bd31ed746c126p8@EXOC6
1.33e-36FFCP PHASE1:Hg19::chr10:94590895..94590905,+#_b13f635adf67a2923e1bd31ed746c126p8@EXOC6
5.59e-36FFCP PHASE1:Hg19::chr8:16425043..16425061,-#_51add38687a5fb93e38c2d4bef4cac77p5@MSR1
5.59e-36FFCP PHASE2:Hg19::chr8:16425043..16425061,-#_51add38687a5fb93e38c2d4bef4cac77p5@MSR1
1.86e-34FFCP PHASE1:Hg19::chr17:79426425..79426444,+#_dd13baa17885e81fa7e82177e28d9345p@chr17:79426425..79426444, +
1.86e-34FFCP PHASE2:Hg19::chr17:79426425..79426444,+#_dd13baa17885e81fa7e82177e28d9345p@chr17:79426425..79426444, +
3.14e-34FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_46d4cfa10f7cb54f3714d5208ba2cf7ap@chr11:57543275..57543296, +
3.14e-34FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_46d4cfa10f7cb54f3714d5208ba2cf7ap@chr11:57543275..57543296, +
2.31e-33FFCP PHASE1:Hg19::chr19:45226133..45226157,-#_5cc680d3e67aad181979a158fe7847d9p@chr19:45226133..45226157, -
2.31e-33FFCP PHASE2:Hg19::chr19:45226133..45226157,-#_5cc680d3e67aad181979a158fe7847d9p@chr19:45226133..45226157, -
2.61e-33FFCP PHASE1:Hg19::chr3:159570877..159570888,+#_7e5aad795c7f0ab8b54b4cdead79f617p43@SCHIP1
2.61e-33FFCP PHASE2:Hg19::chr3:159570877..159570888,+#_7e5aad795c7f0ab8b54b4cdead79f617p43@SCHIP1
7.63e-33FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_40455809bc6b44836d759df6b13b9751p10@PTPRB
7.63e-33FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_40455809bc6b44836d759df6b13b9751p10@PTPRB










Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the circulatory system which consists of a series of vessels which collect blood (exclusive of erythrocytes) which seep through capillary walls and return it to the veins.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.