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UBERON:0005403

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Name:ventral striatum
Namespace:FANTOM
Xrefs:
links:

ABA:STRv
BTO:0004702
EFO:0001936
FMA:77614

MA:0002972
Alt_id: UBERON:MA_0002972-FMA_77614

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0011300(gray matter of telencephalon)
part_of:UBERON:0002435(striatum)



Children

part of:UBERON:0001882 (nucleus accumbens)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005403 (ventral striatum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr9:5304713..5304719,-#_91369212e5add2550cc776705f41bdc8p1@RLN2
5.42e-195FFCP PHASE1:Hg19::chr9:5304713..5304719,-#_91369212e5add2550cc776705f41bdc8p1@RLN2
5.42e-195FFCP PHASE2:Hg19::chr9:19788870..19788880,+#_91369212e5add2550cc776705f41bdc8p@chr9:19788870..19788880, +
5.42e-195FFCP PHASE1:Hg19::chr9:19788870..19788880,+#_91369212e5add2550cc776705f41bdc8p@chr9:19788870..19788880, +
2.55e-98FFCP PHASE2:Hg19::chr16:28075097..28075108,-#_a69ecd7df71050bfa471d5bfad1b14e6p7@GSG1L
2.55e-98FFCP PHASE2:Hg19::chr11:18765490..18765499,-#_a69ecd7df71050bfa471d5bfad1b14e6p16@PTPN5
2.55e-98FFCP PHASE1:Hg19::chr11:18765490..18765499,-#_a69ecd7df71050bfa471d5bfad1b14e6p16@PTPN5
2.55e-98FFCP PHASE1:Hg19::chr16:28075097..28075108,-#_a69ecd7df71050bfa471d5bfad1b14e6p7@GSG1L
2.39e-66FFCP PHASE1:Hg19::chr18:11752139..11752148,+#_249bccfbc53079c5ce60c175c3002817p27@GNAL
2.39e-66FFCP PHASE2:Hg19::chr12:54943367..54943368,+#_249bccfbc53079c5ce60c175c3002817p9@PDE1B
2.39e-66FFCP PHASE2:Hg19::chr3:63542313..63542321,+#_249bccfbc53079c5ce60c175c3002817p@chr3:63542313..63542321, +
2.39e-66FFCP PHASE2:Hg19::chr1:229478819..229478822,-#_249bccfbc53079c5ce60c175c3002817p8@C1orf96
2.39e-66FFCP PHASE1:Hg19::chr3:63542313..63542321,+#_249bccfbc53079c5ce60c175c3002817p@chr3:63542313..63542321, +
2.39e-66FFCP PHASE1:Hg19::chr1:229478819..229478822,-#_249bccfbc53079c5ce60c175c3002817p8@C1orf96
2.39e-66FFCP PHASE1:Hg19::chr12:54943367..54943368,+#_249bccfbc53079c5ce60c175c3002817p9@PDE1B
2.39e-66FFCP PHASE2:Hg19::chr18:11752139..11752148,+#_249bccfbc53079c5ce60c175c3002817p27@GNAL
4.66e-66FFCP PHASE2:Hg19::chr5:35195732..35195740,-#_f21eb53d8eeab721b4964f38a419925ap22@PRLR
4.66e-66FFCP PHASE1:Hg19::chr1:228399053..228399061,-#_f21eb53d8eeab721b4964f38a419925ap@chr1:228399053..228399061, -
4.66e-66FFCP PHASE2:Hg19::chrX:102663083..102663098,+#_f21eb53d8eeab721b4964f38a419925ap@chrX:102663083..102663098, +
4.66e-66FFCP PHASE2:Hg19::chr12:51984146..51984157,+#_f21eb53d8eeab721b4964f38a419925ap11@SCN8A
4.66e-66FFCP PHASE1:Hg19::chr15:37777334..37777345,-#_f21eb53d8eeab721b4964f38a419925ap@chr15:37777334..37777345, -
4.66e-66FFCP PHASE1:Hg19::chr13:42614200..42614212,+#_f21eb53d8eeab721b4964f38a419925ap2@DGKH
4.66e-66FFCP PHASE1:Hg19::chr5:35195732..35195740,-#_f21eb53d8eeab721b4964f38a419925ap22@PRLR
4.66e-66FFCP PHASE2:Hg19::chr4:71945904..71945922,+#_f21eb53d8eeab721b4964f38a419925ap@chr4:71945904..71945922, +
4.66e-66FFCP PHASE2:Hg19::chr8:115354253..115354290,+#_f21eb53d8eeab721b4964f38a419925ap@chr8:115354253..115354290, +
4.66e-66FFCP PHASE2:Hg19::chr15:37777334..37777345,-#_f21eb53d8eeab721b4964f38a419925ap@chr15:37777334..37777345, -
4.66e-66FFCP PHASE1:Hg19::chrX:102663083..102663098,+#_f21eb53d8eeab721b4964f38a419925ap@chrX:102663083..102663098, +
4.66e-66FFCP PHASE2:Hg19::chr13:42614200..42614212,+#_f21eb53d8eeab721b4964f38a419925ap2@DGKH
4.66e-66FFCP PHASE1:Hg19::chr4:71945904..71945922,+#_f21eb53d8eeab721b4964f38a419925ap@chr4:71945904..71945922, +
4.66e-66FFCP PHASE1:Hg19::chr8:115354253..115354290,+#_f21eb53d8eeab721b4964f38a419925ap@chr8:115354253..115354290, +
4.66e-66FFCP PHASE2:Hg19::chr11:47617035..47617045,-#_f21eb53d8eeab721b4964f38a419925ap@chr11:47617035..47617045, -
4.66e-66FFCP PHASE2:Hg19::chr1:228399053..228399061,-#_f21eb53d8eeab721b4964f38a419925ap@chr1:228399053..228399061, -
4.66e-66FFCP PHASE1:Hg19::chr12:51984146..51984157,+#_f21eb53d8eeab721b4964f38a419925ap11@SCN8A
4.66e-66FFCP PHASE1:Hg19::chr11:47617035..47617045,-#_f21eb53d8eeab721b4964f38a419925ap@chr11:47617035..47617045, -
2.42e-50FFCP PHASE1:Hg19::chr4:8073763..8073768,-#_3f6e8130b15d8218f1c1f845296136f2p11@ABLIM2
2.42e-50FFCP PHASE2:Hg19::chr11:63258167..63258182,-#_3f6e8130b15d8218f1c1f845296136f2p8@HRASLS5
2.42e-50FFCP PHASE1:Hg19::chr11:63258167..63258182,-#_3f6e8130b15d8218f1c1f845296136f2p8@HRASLS5
2.42e-50FFCP PHASE2:Hg19::chr4:8073763..8073768,-#_3f6e8130b15d8218f1c1f845296136f2p11@ABLIM2
3.99e-50FFCP PHASE2:Hg19::chr16:645297..645302,+#_1943f767230e171ce2b185ebe8c42e63p@chr16:645297..645302, +
3.99e-50FFCP PHASE2:Hg19::chr7:22382758..22382765,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382758..22382765, -
3.99e-50FFCP PHASE1:Hg19::chr7:4998664..4998674,-#_1943f767230e171ce2b185ebe8c42e63p2@MMD2
3.99e-50FFCP PHASE2:Hg19::chr7:111424008..111424024,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:111424008..111424024, -
3.99e-50FFCP PHASE2:Hg19::chr15:35546154..35546174,-#_1943f767230e171ce2b185ebe8c42e63p@chr15:35546154..35546174, -
3.99e-50FFCP PHASE1:Hg19::chr16:645297..645302,+#_1943f767230e171ce2b185ebe8c42e63p@chr16:645297..645302, +
3.99e-50FFCP PHASE1:Hg19::chr14:78638610..78638621,+#_1943f767230e171ce2b185ebe8c42e63p@chr14:78638610..78638621, +
3.99e-50FFCP PHASE2:Hg19::chr7:22382780..22382797,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382780..22382797, -
3.99e-50FFCP PHASE1:Hg19::chr7:22382758..22382765,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382758..22382765, -
3.99e-50FFCP PHASE1:Hg19::chr7:111424008..111424024,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:111424008..111424024, -
3.99e-50FFCP PHASE1:Hg19::chr7:22382780..22382797,-#_1943f767230e171ce2b185ebe8c42e63p@chr7:22382780..22382797, -
3.99e-50FFCP PHASE2:Hg19::chr14:78638610..78638621,+#_1943f767230e171ce2b185ebe8c42e63p@chr14:78638610..78638621, +
3.99e-50FFCP PHASE2:Hg19::chr2:173600459..173600464,+#_1943f767230e171ce2b185ebe8c42e63p21@RAPGEF4
3.99e-50FFCP PHASE2:Hg19::chr19:57269846..57269858,-#_1943f767230e171ce2b185ebe8c42e63p@chr19:57269846..57269858, -
3.99e-50FFCP PHASE2:Hg19::chr11:47616996..47617008,-#_1943f767230e171ce2b185ebe8c42e63p@chr11:47616996..47617008, -
3.99e-50FFCP PHASE2:Hg19::chr7:4998664..4998674,-#_1943f767230e171ce2b185ebe8c42e63p2@MMD2
3.99e-50FFCP PHASE1:Hg19::chr11:47616996..47617008,-#_1943f767230e171ce2b185ebe8c42e63p@chr11:47616996..47617008, -
3.99e-50FFCP PHASE1:Hg19::chr15:35546154..35546174,-#_1943f767230e171ce2b185ebe8c42e63p@chr15:35546154..35546174, -
3.99e-50FFCP PHASE1:Hg19::chr2:173600459..173600464,+#_1943f767230e171ce2b185ebe8c42e63p21@RAPGEF4
3.99e-50FFCP PHASE1:Hg19::chr19:57269846..57269858,-#_1943f767230e171ce2b185ebe8c42e63p@chr19:57269846..57269858, -
6.58e-50FFCP PHASE1:Hg19::chr2:152828264..152828299,-#_49662ec856358f45c161b41482c37e0dp@chr2:152828264..152828299, -
6.58e-50FFCP PHASE1:Hg19::chr18:47967428..47967437,-#_49662ec856358f45c161b41482c37e0dp@chr18:47967428..47967437, -
6.58e-50FFCP PHASE2:Hg19::chr13:112726433..112726446,+#_49662ec856358f45c161b41482c37e0dp@chr13:112726433..112726446, +
6.58e-50FFCP PHASE1:Hg19::chr8:75564025..75564036,+#_49662ec856358f45c161b41482c37e0dp@chr8:75564025..75564036, +
6.58e-50FFCP PHASE2:Hg19::chr7:29846088..29846091,+#_49662ec856358f45c161b41482c37e0dp20@WIPF3
6.58e-50FFCP PHASE2:Hg19::chr1:31352916..31352926,-#_49662ec856358f45c161b41482c37e0dp@chr1:31352916..31352926, -
6.58e-50FFCP PHASE1:Hg19::chr14:71905629..71905640,+#_49662ec856358f45c161b41482c37e0dp@chr14:71905629..71905640, +
6.58e-50FFCP PHASE2:Hg19::chr12:49375345..49375356,-#_49662ec856358f45c161b41482c37e0dp@chr12:49375345..49375356, -
6.58e-50FFCP PHASE2:Hg19::chrX:132091252..132091261,-#_49662ec856358f45c161b41482c37e0dp17@HS6ST2
6.58e-50FFCP PHASE1:Hg19::chr7:29846088..29846091,+#_49662ec856358f45c161b41482c37e0dp20@WIPF3
6.58e-50FFCP PHASE2:Hg19::chrX:85969610..85969619,+#_49662ec856358f45c161b41482c37e0dp4@DACH2
6.58e-50FFCP PHASE1:Hg19::chr1:31352916..31352926,-#_49662ec856358f45c161b41482c37e0dp@chr1:31352916..31352926, -
6.58e-50FFCP PHASE1:Hg19::chr12:6031299..6031315,-#_49662ec856358f45c161b41482c37e0dp@chr12:6031299..6031315, -
6.58e-50FFCP PHASE2:Hg19::chr14:71905629..71905640,+#_49662ec856358f45c161b41482c37e0dp@chr14:71905629..71905640, +
6.58e-50FFCP PHASE1:Hg19::chrX:132091252..132091261,-#_49662ec856358f45c161b41482c37e0dp17@HS6ST2
6.58e-50FFCP PHASE2:Hg19::chr21:45788960..45788972,+#_49662ec856358f45c161b41482c37e0dp12@TRPM2
6.58e-50FFCP PHASE2:Hg19::chr2:152828264..152828299,-#_49662ec856358f45c161b41482c37e0dp@chr2:152828264..152828299, -
6.58e-50FFCP PHASE1:Hg19::chrX:85969610..85969619,+#_49662ec856358f45c161b41482c37e0dp4@DACH2
6.58e-50FFCP PHASE1:Hg19::chr12:49375345..49375356,-#_49662ec856358f45c161b41482c37e0dp@chr12:49375345..49375356, -
6.58e-50FFCP PHASE1:Hg19::chr13:112726433..112726446,+#_49662ec856358f45c161b41482c37e0dp@chr13:112726433..112726446, +
6.58e-50FFCP PHASE2:Hg19::chr12:6031299..6031315,-#_49662ec856358f45c161b41482c37e0dp@chr12:6031299..6031315, -
6.58e-50FFCP PHASE2:Hg19::chr8:75564025..75564036,+#_49662ec856358f45c161b41482c37e0dp@chr8:75564025..75564036, +
6.58e-50FFCP PHASE2:Hg19::chr18:47967428..47967437,-#_49662ec856358f45c161b41482c37e0dp@chr18:47967428..47967437, -
6.58e-50FFCP PHASE1:Hg19::chr21:45788960..45788972,+#_49662ec856358f45c161b41482c37e0dp12@TRPM2
6.62e-41FFCP PHASE2:Hg19::chr11:130011708..130011717,+#_4ba5e613fed43764a900d33f7fded995p18@APLP2
6.62e-41FFCP PHASE1:Hg19::chr11:130011708..130011717,+#_4ba5e613fed43764a900d33f7fded995p18@APLP2
9.91e-41FFCP PHASE1:Hg19::chr1:35198521..35198523,-#_08bd62954f45aef4fcf088b309c702bbp@chr1:35198521..35198523, -
9.91e-41FFCP PHASE2:Hg19::chr12:11652913..11652927,+#_08bd62954f45aef4fcf088b309c702bbp@chr12:11652913..11652927, +
9.91e-41FFCP PHASE2:Hg19::chr3:156008856..156008863,+#_08bd62954f45aef4fcf088b309c702bbp23@KCNAB1
9.91e-41FFCP PHASE1:Hg19::chr12:11652913..11652927,+#_08bd62954f45aef4fcf088b309c702bbp@chr12:11652913..11652927, +
9.91e-41FFCP PHASE2:Hg19::chr1:35198521..35198523,-#_08bd62954f45aef4fcf088b309c702bbp@chr1:35198521..35198523, -
9.91e-41FFCP PHASE1:Hg19::chr3:156008856..156008863,+#_08bd62954f45aef4fcf088b309c702bbp23@KCNAB1
1.48e-40FFCP PHASE2:Hg19::chr2:127783377..127783391,+#_71f5b0e38f6886b4e0d690b2c81d45a7p2@BC051739
1.48e-40FFCP PHASE2:Hg19::chr6:19877308..19877326,-#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr6:19877308..19877326, -
1.48e-40FFCP PHASE1:Hg19::chr20:9496091..9496106,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr20:9496091..9496106, +
1.48e-40FFCP PHASE2:Hg19::chr10:97261874..97261887,-#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr10:97261874..97261887, -
1.48e-40FFCP PHASE1:Hg19::chr2:127783377..127783391,+#_71f5b0e38f6886b4e0d690b2c81d45a7p2@BC051739
1.48e-40FFCP PHASE1:Hg19::chr6:19877308..19877326,-#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr6:19877308..19877326, -
1.48e-40FFCP PHASE2:Hg19::chr3:57807798..57807809,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr3:57807798..57807809, +
1.48e-40FFCP PHASE2:Hg19::chr7:143582357..143582366,-#_71f5b0e38f6886b4e0d690b2c81d45a7p9@FAM115A
1.48e-40FFCP PHASE2:Hg19::chr6:145132414..145132428,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr6:145132414..145132428, +
1.48e-40FFCP PHASE1:Hg19::chr3:57807798..57807809,+#_71f5b0e38f6886b4e0d690b2c81d45a7p@chr3:57807798..57807809, +

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