FFCP PHASE2:Hg19::chr17:15555123..15555141,-
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Short description: | p4@TRIM16 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM16_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | 118bp_to_uc002gor.1_5end |
EntrezGene: | TRIM16 |
HGNC: | 17241 |
UniProt: | Q59EB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@TRIM16 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 5.00e-22 | 253 |
kidney cortical cell | 5.36e-14 | 12 |
renal cortical epithelial cell | 5.36e-14 | 12 |
epithelial cell of nephron | 6.65e-11 | 15 |
ciliated cell | 1.79e-09 | 3 |
ciliated epithelial cell | 1.79e-09 | 3 |
multi-ciliated epithelial cell | 1.79e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.79e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.79e-09 | 3 |
kidney tubule cell | 1.81e-09 | 10 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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cortex of kidney | 5.36e-14 | 12 |
renal parenchyma | 5.36e-14 | 12 |
extraembryonic membrane | 5.45e-12 | 14 |
membranous layer | 5.45e-12 | 14 |
cortex | 6.65e-11 | 15 |
nephron epithelium | 6.65e-11 | 15 |
renal tubule | 6.65e-11 | 15 |
parenchyma | 6.65e-11 | 15 |
nephron tubule | 6.65e-11 | 15 |
nephron | 6.65e-11 | 15 |
Showing 1 to 10 of 40 entries
Ontology term | p-value | n |
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squamous cell carcinoma | 1.32e-11 | 14 |
carcinoma | 4.55e-08 | 106 |
Showing 1 to 2 of 2 entries