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Difference between revisions of "CL:0000212"

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{{CL
 
{{CL
|id=CL:0000212
+
|alt_id=
|name=absorptive cell
 
|namespace=cell
 
|def="A cell that takes up and metabolizes substances." [CL:CVS]
 
|xref=
 
|is_a=CL:0000144
 
|synonym=
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="A cell that takes up and metabolizes substances." [CL:CVS]
|subset=
 
|adjacent_to=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=CL:0000212
 +
|is_a=CL:0000003
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=absorptive cell
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym=
 +
|union_of=
 +
|xref=
 
}}
 
}}

Latest revision as of 07:31, 12 September 2014

Name:absorptive cell
Namespace:FANTOM
Definition:"A cell that takes up and metabolizes substances." [CL:CVS]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000677 (gut absorptive cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)

Mouse (Mus musculus)

  • 11848-124I3 (CD326+ enterocyte, pool1)
  • 11849-124I4 (CD326+ enterocyte, pool2)
  • 11850-124I5 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11851-124I6 (CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2)
  • 11852-124I7 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1)
  • 11853-124I8 (CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000212 (absorptive cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster