CL:0000738: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0000738
|name=leukocyte
|namespace=cell
|def="An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissu...") |
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." [GOC:add, GOC:tfm, ISBN:978-0-323-05290-0] | ||
|derives_from= | |derives_from= | ||
|develops_from=CL:0000037 | |develops_from=CL:0000037 | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0000738 | |||
|is_a=CL:0000219 ;;CL:0000988 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=leukocyte | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0002405 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |||
|subset= | |||
|synonym="immune cell" EXACT [];;"leucocyte" EXACT [];;"white blood cell" EXACT [] | |||
|union_of= | |||
|xref=BTO:0000751;;FMA:62852 | |||
}} | }} | ||
Latest revision as of 16:36, 12 September 2014
| Name: | leukocyte | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An achromatic cell of the myeloid or lymphoid lineages capable of ameboid movement, found in blood or other tissue." [GOC:add, GOC:tfm, ISBN:978-0-323-05290-0] | ||
| Xrefs: |
| ||
| Synonyms: |
"immune cell" EXACT [] "leucocyte" EXACT [] "white blood cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000219(motile cell),CL:0000988(hematopoietic cell) |
|---|---|
| develops_from: | CL:0000037(hematopoietic stem cell) |
| part_of: | UBERON:0002405(immune system) |
Children
| is a: | CL:0000451 (dendritic cell),CL:0000766 (myeloid leukocyte),CL:0002087 (nongranular leukocyte) |
|---|---|
| derives from: | FF:0104973 (Hodgkin lymphoma cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
- 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10416-106C2 (chronic lymphocytic leukemia (T-CLL) cell line:SKW-3)
- 10421-106C7 (adult T-cell leukemia cell line:ATN-1)
- 10422-106C8 (Burkitt's lymphoma cell line:DAUDI)
- 10427-106D4 (b cell line:RPMI1788)
- 10429-106D6 (acute lymphoblastic leukemia (T-ALL) cell line:HPB-ALL)
- 10435-106E3 (Hodgkin's lymphoma cell line:HD-Mar2)
- 10455-106G5 (acute lymphoblastic leukemia (B-ALL) cell line:BALL-1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000738 (leukocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.79e-110 | FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_220fc651e91be1e5fa73d8c3062f53db | p4@RASSF5 |
| 6.79e-110 | FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_220fc651e91be1e5fa73d8c3062f53db | p4@RASSF5 |
| 2.26e-109 | FFCP PHASE2:Hg19::chr1:203256483..203256503,-#_668d6f1d3d810764d1b007918f7166c7 | p@chr1:203256483..203256503, - |
| 2.26e-109 | FFCP PHASE1:Hg19::chr1:203256483..203256503,-#_668d6f1d3d810764d1b007918f7166c7 | p@chr1:203256483..203256503, - |
| 5.29e-108 | FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_2ae36b4f2aa1eee7c15716f8e42f9c1c | p2@PLEK |
| 5.29e-108 | FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_2ae36b4f2aa1eee7c15716f8e42f9c1c | p2@PLEK |
| 1.08e-107 | FFCP PHASE2:Hg19::chr13:41593392..41593403,-#_002802208359386d00e55e0a52b4dca4 | p7@ELF1 |
| 1.08e-107 | FFCP PHASE1:Hg19::chr13:41593392..41593403,-#_002802208359386d00e55e0a52b4dca4 | p7@ELF1 |
| 3.21e-107 | FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_cd00ca476dfc29a4961eaff07dfa7e03 | p@chr19:49842010..49842054, + |
| 3.21e-107 | FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_cd00ca476dfc29a4961eaff07dfa7e03 | p@chr19:49842010..49842054, + |
| 5.93e-107 | FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_e893a1058b6547f69107431c9138c851 | p@chr2:24149046..24149063, + |
| 5.93e-107 | FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_e893a1058b6547f69107431c9138c851 | p@chr2:24149046..24149063, + |
| 1.93e-106 | FFCP PHASE1:Hg19::chr13:41593405..41593416,-#_5b1062665302e0f982f9f122bece61f4 | p9@ELF1 |
| 1.93e-106 | FFCP PHASE2:Hg19::chr13:41593405..41593416,-#_5b1062665302e0f982f9f122bece61f4 | p9@ELF1 |
| 5.83e-106 | FFCP PHASE1:Hg19::chr1:203256822..203256845,+#_eaac8e6cec79f73b305d83819551130c | p1@ENST00000433008 |
| 5.83e-106 | FFCP PHASE2:Hg19::chr1:203256822..203256845,+#_eaac8e6cec79f73b305d83819551130c | p1@ENST00000433008 |
| 7.74e-106 | FFCP PHASE1:Hg19::chr17:6917862..6917879,-#_bc1bc4f9b699fa90dcd7b8d8f493d425 | p1@AF161372 |
| 7.74e-106 | FFCP PHASE2:Hg19::chr17:6917862..6917879,-#_bc1bc4f9b699fa90dcd7b8d8f493d425 | p1@AF161372 |
| 2.31e-105 | FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_b56c4162fc33068722b53d1fe4d7ce4a | p3@MOB3A |
| 2.31e-105 | FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_b56c4162fc33068722b53d1fe4d7ce4a | p3@MOB3A |
| 8.43e-105 | FFCP PHASE1:Hg19::chr2:163175430..163175460,-#_986b4c1febf091809d583c1901e2fb52 | p2@IFIH1 |
| 8.43e-105 | FFCP PHASE2:Hg19::chr2:163175430..163175460,-#_986b4c1febf091809d583c1901e2fb52 | p2@IFIH1 |
| 9.45e-105 | FFCP PHASE1:Hg19::chr2:158300487..158300500,-#_8f86b396982a60957cf12a364b0836c0 | p3@CYTIP |
| 9.45e-105 | FFCP PHASE2:Hg19::chr2:158300487..158300500,-#_8f86b396982a60957cf12a364b0836c0 | p3@CYTIP |
| 2.82e-104 | FFCP PHASE1:Hg19::chr15:73075463..73075507,+#_e0d506016fd7b439a309d5def3fe758c | p1@LOC100287559 |
| 2.82e-104 | FFCP PHASE2:Hg19::chr15:73075463..73075507,+#_e0d506016fd7b439a309d5def3fe758c | p1@LOC100287559 |
| 5.87e-103 | FFCP PHASE1:Hg19::chr17:36857970..36858038,+#_9424a225d310f57b6a7b263076645fbd | p@chr17:36857970..36858038, + |
| 5.87e-103 | FFCP PHASE2:Hg19::chr17:36857970..36858038,+#_9424a225d310f57b6a7b263076645fbd | p@chr17:36857970..36858038, + |
| 8.39e-103 | FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_d310711eb9918fc8b73e9198feb9ef31 | p@chr1:31206575..31206590, - |
| 8.39e-103 | FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_d310711eb9918fc8b73e9198feb9ef31 | p@chr1:31206575..31206590, - |
| 1.11e-102 | FFCP PHASE1:Hg19::chr2:61110364..61110387,-#_7d679d946fd65df6ead20844d6a1025c | p@chr2:61110364..61110387, - |
| 1.11e-102 | FFCP PHASE2:Hg19::chr2:61110364..61110387,-#_7d679d946fd65df6ead20844d6a1025c | p@chr2:61110364..61110387, - |
| 1.78e-102 | FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_a97aa015e1a31e57ff42c5d9c2fb567c | p1@LINC00528 |
| 1.78e-102 | FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_a97aa015e1a31e57ff42c5d9c2fb567c | p1@LINC00528 |
| 3.75e-102 | FFCP PHASE2:Hg19::chr5:100236376..100236391,-#_05e2c4a25c1ab4ab911ea90e41483b6d | p@chr5:100236376..100236391, - |
| 3.75e-102 | FFCP PHASE1:Hg19::chr5:100236376..100236391,-#_05e2c4a25c1ab4ab911ea90e41483b6d | p@chr5:100236376..100236391, - |
| 5.82e-102 | FFCP PHASE1:Hg19::chr19:49842573..49842602,+#_fe072878b67a4c7b281ad1437359e8b4 | p@chr19:49842573..49842602, + |
| 5.82e-102 | FFCP PHASE2:Hg19::chr19:49842573..49842602,+#_fe072878b67a4c7b281ad1437359e8b4 | p@chr19:49842573..49842602, + |
| 7.87e-102 | FFCP PHASE2:Hg19::chr19:49843537..49843640,+#_b834afc0edbcf4bbfd54f0cca2b0635b | p@chr19:49843537..49843640, + |
| 7.87e-102 | FFCP PHASE1:Hg19::chr19:49843537..49843640,+#_b834afc0edbcf4bbfd54f0cca2b0635b | p@chr19:49843537..49843640, + |
| 2.77e-101 | FFCP PHASE2:Hg19::chr17:8868385..8868412,+#_ca75de798b6b6c071fc7d1879c57c81d | p@chr17:8868385..8868412, + |
| 2.77e-101 | FFCP PHASE1:Hg19::chr17:8868385..8868412,+#_ca75de798b6b6c071fc7d1879c57c81d | p@chr17:8868385..8868412, + |
| 3.83e-101 | FFCP PHASE1:Hg19::chr1:160681573..160681587,-#_20d4ec56c65f14ab43e5bdc1cf283193 | p2@CD48 |
| 3.83e-101 | FFCP PHASE2:Hg19::chr1:160681573..160681587,-#_20d4ec56c65f14ab43e5bdc1cf283193 | p2@CD48 |
| 5.05e-101 | FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_f4d24155f701f8bbdbbc237a5d6dfa31 | p@chr17:56415424..56415454, - |
| 5.05e-101 | FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_f4d24155f701f8bbdbbc237a5d6dfa31 | p@chr17:56415424..56415454, - |
| 6.02e-101 | FFCP PHASE2:Hg19::chr16:50776625..50776663,-#_183c5a7dfc1a1fa9eaee6c9c69ea57b1 | p@chr16:50776625..50776663, - |
| 6.02e-101 | FFCP PHASE1:Hg19::chr16:50776625..50776663,-#_183c5a7dfc1a1fa9eaee6c9c69ea57b1 | p@chr16:50776625..50776663, - |
| 1.12e-100 | FFCP PHASE2:Hg19::chr21:46340884..46340893,-#_728b4493d2dd900ae97f21f6cb1b1802 | p3@ITGB2 |
| 1.12e-100 | FFCP PHASE1:Hg19::chr21:46340884..46340893,-#_728b4493d2dd900ae97f21f6cb1b1802 | p3@ITGB2 |
| 3.56e-100 | FFCP PHASE1:Hg19::chr1:9711821..9711832,+#_06ad8404a477447d5bf9d689f2dfe24c | p2@PIK3CD |
| 3.56e-100 | FFCP PHASE2:Hg19::chr1:9711821..9711832,+#_06ad8404a477447d5bf9d689f2dfe24c | p2@PIK3CD |
| 1.24e-99 | FFCP PHASE1:Hg19::chr6:14122393..14122430,+#_5d7bd3d2a4d0f487a2f67312babdfb34 | p@chr6:14122393..14122430, + |
| 1.24e-99 | FFCP PHASE2:Hg19::chr6:14122393..14122430,+#_5d7bd3d2a4d0f487a2f67312babdfb34 | p@chr6:14122393..14122430, + |
| 1.58e-99 | FFCP PHASE2:Hg19::chr9:134543820..134543862,-#_fd7430ae8ab1bdf13d5cc00950a78772 | p@chr9:134543820..134543862, - |
| 1.58e-99 | FFCP PHASE1:Hg19::chr9:134543820..134543862,-#_fd7430ae8ab1bdf13d5cc00950a78772 | p@chr9:134543820..134543862, - |
| 2.64e-99 | FFCP PHASE2:Hg19::chr1:203258874..203258891,+#_edad4eb0143b47f1d7515bd619c82ac2 | p@chr1:203258874..203258891, + |
| 2.64e-99 | FFCP PHASE1:Hg19::chr1:203258874..203258891,+#_edad4eb0143b47f1d7515bd619c82ac2 | p@chr1:203258874..203258891, + |
| 3.03e-99 | FFCP PHASE2:Hg19::chr1:31229452..31229490,-#_840c6468ce88648ffa2fddb40a6be893 | p@chr1:31229452..31229490, - |
| 3.03e-99 | FFCP PHASE1:Hg19::chr1:31229452..31229490,-#_840c6468ce88648ffa2fddb40a6be893 | p@chr1:31229452..31229490, - |
| 1.25e-98 | FFCP PHASE1:Hg19::chr19:16695359..16695379,+#_05111e2bc511d531fea37d240d94d071 | p@chr19:16695359..16695379, + |
| 1.25e-98 | FFCP PHASE2:Hg19::chr19:16695359..16695379,+#_05111e2bc511d531fea37d240d94d071 | p@chr19:16695359..16695379, + |
| 1.82e-98 | FFCP PHASE2:Hg19::chr14:100531693..100531705,+#_128eb99f681c882591770809bae5e5af | p6@EVL |
| 1.82e-98 | FFCP PHASE1:Hg19::chr14:100531693..100531705,+#_128eb99f681c882591770809bae5e5af | p6@EVL |
| 1.84e-98 | FFCP PHASE2:Hg19::chr1:185125341..185125373,+#_f1a329ca7b26f9c7c9ab53c0004cbc6e | p@chr1:185125341..185125373, + |
| 1.84e-98 | FFCP PHASE1:Hg19::chr1:185125341..185125373,+#_f1a329ca7b26f9c7c9ab53c0004cbc6e | p@chr1:185125341..185125373, + |
| 3.19e-98 | FFCP PHASE1:Hg19::chr17:43303504..43303534,-#_a5d7c2668e024f0feeeed753d57bc249 | p@chr17:43303504..43303534, - |
| 3.19e-98 | FFCP PHASE2:Hg19::chr17:43303504..43303534,-#_a5d7c2668e024f0feeeed753d57bc249 | p@chr17:43303504..43303534, - |
| 7.75e-98 | FFCP PHASE1:Hg19::chr5:149790235..149790248,-#_47a33775ee52a6b161b205f04ad7771a | p@chr5:149790235..149790248, - |
| 7.75e-98 | FFCP PHASE2:Hg19::chr5:149790235..149790248,-#_47a33775ee52a6b161b205f04ad7771a | p@chr5:149790235..149790248, - |
| 1.36e-97 | FFCP PHASE2:Hg19::chr15:45018966..45018983,-#_d246291f37d50e4b4ca0e79ec21e0c7d | p@chr15:45018966..45018983, - |
| 1.36e-97 | FFCP PHASE1:Hg19::chr15:45018966..45018983,-#_d246291f37d50e4b4ca0e79ec21e0c7d | p@chr15:45018966..45018983, - |
| 1.41e-97 | FFCP PHASE1:Hg19::chr19:49838937..49838974,+#_4db6aa25d039569d225cf2c57b4c1567 | p@chr19:49838937..49838974, + |
| 1.41e-97 | FFCP PHASE2:Hg19::chr19:49838937..49838974,+#_4db6aa25d039569d225cf2c57b4c1567 | p@chr19:49838937..49838974, + |
| 2.18e-97 | FFCP PHASE1:Hg19::chr6:32577619..32577667,-#_df05e0aa461298729af8f51922061111 | p@chr6:32577619..32577667, - |
| 2.18e-97 | FFCP PHASE2:Hg19::chr6:32577619..32577667,-#_df05e0aa461298729af8f51922061111 | p@chr6:32577619..32577667, - |
| 5.38e-97 | FFCP PHASE1:Hg19::chr1:27986192..27986227,-#_d0791354edcbe43f5d137aec9e414e12 | p@chr1:27986192..27986227, - |
| 5.38e-97 | FFCP PHASE2:Hg19::chr1:27986192..27986227,-#_d0791354edcbe43f5d137aec9e414e12 | p@chr1:27986192..27986227, - |
| 6.07e-97 | FFCP PHASE1:Hg19::chr11:64107705..64107718,+#_2dc1592f89f61c472e1aaf3bc2b89bbd | p2@CCDC88B |
| 6.07e-97 | FFCP PHASE2:Hg19::chr11:64107705..64107718,+#_2dc1592f89f61c472e1aaf3bc2b89bbd | p2@CCDC88B |
| 6.11e-97 | FFCP PHASE1:Hg19::chr19:2085323..2085357,-#_6691733112e7f8fa9180d8ab86f225b5 | p2@MOB3A |
| 6.11e-97 | FFCP PHASE2:Hg19::chr19:2085323..2085357,-#_6691733112e7f8fa9180d8ab86f225b5 | p2@MOB3A |
| 1.36e-96 | FFCP PHASE1:Hg19::chr1:206753376..206753393,-#_f6859ca95bc68155c48ba22efd35d2c8 | p@chr1:206753376..206753393, - |
| 1.36e-96 | FFCP PHASE2:Hg19::chr1:206753376..206753393,-#_f6859ca95bc68155c48ba22efd35d2c8 | p@chr1:206753376..206753393, - |
| 1.47e-96 | FFCP PHASE1:Hg19::chr5:100239086..100239122,+#_b1ba7c30b7fab5cdce9c9642378749db | p1@AK055485 |
| 1.47e-96 | FFCP PHASE2:Hg19::chr5:100239086..100239122,+#_b1ba7c30b7fab5cdce9c9642378749db | p1@AK055485 |
| 2.08e-96 | FFCP PHASE1:Hg19::chr10:11207485..11207496,+#_0253886a90adf67cf4f4a284a159cb0d | p9@CELF2 |
| 2.08e-96 | FFCP PHASE2:Hg19::chr10:11207485..11207496,+#_0253886a90adf67cf4f4a284a159cb0d | p9@CELF2 |
| 3.45e-96 | FFCP PHASE2:Hg19::chr2:158300517..158300544,-#_8fa640e79ba297af9ab10b7b0779fbc7 | p2@CYTIP |
| 3.45e-96 | FFCP PHASE1:Hg19::chr2:158300517..158300544,-#_8fa640e79ba297af9ab10b7b0779fbc7 | p2@CYTIP |
| 4.94e-96 | FFCP PHASE2:Hg19::chr2:128458939..128458961,-#_637f514b52427eb79098462f56141f11 | p@chr2:128458939..128458961, - |
| 4.94e-96 | FFCP PHASE1:Hg19::chr2:128458939..128458961,-#_637f514b52427eb79098462f56141f11 | p@chr2:128458939..128458961, - |
| 6.04e-96 | FFCP PHASE1:Hg19::chr19:1067256..1067270,+#_187ed32ea3b943b40222785a5f5138ce | p4@HMHA1 |
| 6.04e-96 | FFCP PHASE2:Hg19::chr19:1067256..1067270,+#_187ed32ea3b943b40222785a5f5138ce | p4@HMHA1 |
| 7.23e-96 | FFCP PHASE1:Hg19::chr16:50715172..50715194,-#_21afaa9a7e0d5e5ca5e26f31d87b9ec9 | p2@SNX20 |
| 7.23e-96 | FFCP PHASE2:Hg19::chr16:50715172..50715194,-#_21afaa9a7e0d5e5ca5e26f31d87b9ec9 | p2@SNX20 |
| 7.83e-96 | FFCP PHASE2:Hg19::chr1:27952741..27952753,-#_697e215337bbad2a71d2680fc68a2e02 | p8@FGR |
| 7.83e-96 | FFCP PHASE1:Hg19::chr1:27952741..27952753,-#_697e215337bbad2a71d2680fc68a2e02 | p8@FGR |
| 1.47e-95 | FFCP PHASE2:Hg19::chr7:128503395..128503414,+#_fa3db0accae75a983c7cbbb3476db5d6 | p@chr7:128503395..128503414, + |
| 1.47e-95 | FFCP PHASE1:Hg19::chr7:128503395..128503414,+#_fa3db0accae75a983c7cbbb3476db5d6 | p@chr7:128503395..128503414, + |
