FFCP PHASE1:Hg19::chr12:4227335..4227346,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_ENST00000393388_5end | |association_with_transcript=-37bp_to_ENST00000393388_5end | ||
|cluster_id=chr12:4227335..4227346,- | |||
|coexpression_cluster_id=C36 | |coexpression_cluster_id=C36 | ||
|description=CAGE_peak_2_at_ENST00000393388_5end | |description=CAGE_peak_2_at_ENST00000393388_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!1.18e-23!24;CL:0000826!1.18e-23!24;CL:0000838!1.32e-10!52;CL:0000542!2.16e-10!53;CL:0000051!2.16e-10!53;CL:0000738!1.17e-08!140;CL:0002087!1.43e-08!119;CL:0002031!3.55e-08!124;CL:0000988!1.25e-07!182;CL:0002032!4.00e-07!165;CL:0000837!4.00e-07!165;CL:0000037!8.98e-07!172;CL:0000566!8.98e-07!172 | |ontology_enrichment_celltype=CL:0000945!1.18e-23!24;CL:0000826!1.18e-23!24;CL:0000838!1.32e-10!52;CL:0000542!2.16e-10!53;CL:0000051!2.16e-10!53;CL:0000738!1.17e-08!140;CL:0002087!1.43e-08!119;CL:0002031!3.55e-08!124;CL:0000988!1.25e-07!182;CL:0002032!4.00e-07!165;CL:0000837!4.00e-07!165;CL:0000037!8.98e-07!172;CL:0000566!8.98e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.38e-22;24 | |ontology_enrichment_celltype_v019=CL:0000945;1.38e-22;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.30e-22,24;CL:0000826,1.30e-22,24;CL:0000838,8.87e-11,52;CL:0000542,1.38e-10,53;CL:0000051,1.38e-10,53;CL:0002087,1.46e-07,115;CL:0002031,2.91e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2 | |ontology_enrichment_development_v019=UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2 | ||
|ontology_enrichment_disease=DOID:2355!3.76e-13!1;DOID:4960!4.77e-13!1;DOID:0070004!4.77e-13!1;DOID:630!5.38e-13!1;DOID:0050177!5.38e-13!1;DOID:0050427!5.38e-13!1;DOID:74!3.28e-07!2 | |ontology_enrichment_disease=DOID:2355!3.76e-13!1;DOID:4960!4.77e-13!1;DOID:0070004!4.77e-13!1;DOID:630!5.38e-13!1;DOID:0050177!5.38e-13!1;DOID:0050427!5.38e-13!1;DOID:74!3.28e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0003343;1.57e-09;4!UBERON:0004785;1.57e-09;4!UBERON:0000974;8.97e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001723;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0003343;1.57e-09;4!UBERON:0004785;1.57e-09;4!UBERON:0000974;8.97e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.89e-12,3;UBERON:0001033,2.89e-12,3;UBERON:0010056,2.89e-12,3;UBERON:0003343,1.57e-09,4;UBERON:0004785,1.57e-09,4 | |||
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|short_description=p2@ENST00000393388 | |short_description=p2@ENST00000393388 | ||
}} | }} |
Latest revision as of 08:26, 24 July 2015
Short description: | p2@ENST00000393388 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000393388_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -37bp_to_ENST00000393388_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.30e-22 | 24 |
pro-B cell | 1.30e-22 | 24 |
lymphoid lineage restricted progenitor cell | 8.87e-11 | 52 |
lymphocyte | 1.38e-10 | 53 |
common lymphoid progenitor | 1.38e-10 | 53 |
nongranular leukocyte | 1.46e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.89e-12 | 3 |
gustatory system | 2.89e-12 | 3 |
future tongue | 2.89e-12 | 3 |
mucosa of oral region | 1.57e-09 | 4 |
respiratory system mucosa | 1.57e-09 | 4 |