FFCP PHASE1:Hg19::chr12:93323013..93323112,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:93323013..93323112,- to FFCP PHASE1:Hg19::chr12:93323013..93323112,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8411 | |EntrezGene=8411 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3185 | |HGNC=3185 | ||
|TSSclassifier=strong | |||
|UniProt=Q15075,F8WE79,F8VUZ7 | |UniProt=Q15075,F8WE79,F8VUZ7 | ||
|association_with_transcript=0bp_to_ENST00000322349,ENST00000418984,ENST00000547833,ENST00000553019,NM_003566,uc001tck.2_5end | |||
|cluster_id=chr12:93323013..93323112,- | |||
|description=CAGE_peak_1_at_EEA1_5end | |||
|id=chr12:93323013..93323112,- | |||
|ontology_enrichment_celltype=CL:0000057!2.61e-09!75;CL:0002620!6.34e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-07;33!CL:0002057;1.73e-07;33!CL:0002620;7.25e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.39e-09,76;CL:0000557,2.95e-07,67;CL:0002620,6.34e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!1.16e-09!511;UBERON:0000467!3.68e-08!625;UBERON:0000480!6.94e-08!626;UBERON:0000468!1.05e-07!659;UBERON:0003102!2.23e-07!95;UBERON:0004765!2.39e-07!101;UBERON:0001434!2.39e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.00e-08,99;UBERON:0001434,2.09e-07,100;UBERON:0001474,8.53e-07,82 | |||
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|short_description=p1@EEA1 | |||
}} | }} |
Latest revision as of 23:40, 15 September 2015
Short description: | p1@EEA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EEA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000322349, ENST00000418984, ENST00000547833, ENST00000553019, NM_003566, uc001tck.2_5end |
EntrezGene: | EEA1 |
HGNC: | 3185 |
UniProt: | Q15075F8WE79F8VUZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.39e-09 | 76 |
granulocyte monocyte progenitor cell | 2.95e-07 | 67 |
skin fibroblast | 6.34e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.00e-08 | 99 |
skeletal system | 2.09e-07 | 100 |
bone element | 8.53e-07 | 82 |