FFCP PHASE1:Hg19::chr14:105634536..105634543,+: Difference between revisions
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|id=chr14:105634536..105634543,+
|short_description=p@chr14:105634536..105634543,+
|description=CAGE_peak_at_chr14:105634536..105634543,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:105634536..105634543,+ | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_at_chr14:105634536..105634543,+ | |||
|id=chr14:105634536..105634543,+ | |||
|ontology_enrichment_celltype=CL:1000415!1.15e-09!2;CL:0002322!2.82e-08!5;CL:0000540!2.23e-07!6;CL:0000031!2.23e-07!6;CL:0000404!2.23e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.82e-27;6!CL:0000404;1.82e-27;6!CL:0002166;1.83e-14;3!CL:0002159;2.66e-12;14!CL:0000312;3.22e-09;5!CL:0000240;6.78e-08;6!CL:0000311;6.78e-08;6!CL:0000079;6.78e-08;6!CL:0000237;6.78e-08;6!CL:0002319;6.43e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.82e-27,6;CL:0000031,1.82e-27,6;CL:0000404,1.82e-27,6;CL:0000047,6.64e-21,8;CL:0002166,1.83e-14,3;CL:0002159,2.82e-12,14;CL:0000221,3.07e-09,72;CL:0000312,3.49e-09,5;CL:0000240,7.25e-08,6;CL:0000311,7.25e-08,6;CL:0000079,7.25e-08,6;CL:0000237,7.25e-08,6;CL:0000036,7.25e-08,6;CL:0000357,7.25e-08,6;CL:0000114,7.25e-08,6;CL:0002319,6.43e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;1.82e-27;6!CL:0000357;6.78e-08;6!CL:0000114;6.78e-08;6 | |||
|ontology_enrichment_disease=DOID:305!8.37e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.22e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0001873!1.05e-09!2;UBERON:0010122!1.05e-09!2;UBERON:0003100!1.20e-08!41;UBERON:0000002!4.90e-07!6;UBERON:0001560!4.90e-07!6;UBERON:0005383!9.83e-07!3;UBERON:0005382!9.83e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;3.42e-11;4!UBERON:0008895;3.42e-11;4!UBERON:0011159;3.22e-09;5!UBERON:0000002;6.78e-08;6!UBERON:0001560;6.78e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,3.42e-11,4;UBERON:0008895,3.42e-11,4;UBERON:0011159,3.22e-09,5;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6;UBERON:0010188,6.78e-08,6;UBERON:0002539,6.78e-08,6;UBERON:0008816,6.78e-08,6 | |||
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|short_description=p@chr14:105634536..105634543,+ | |||
}} | }} |
Latest revision as of 18:31, 24 July 2015
Short description: | p@chr14:105634536..105634543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105634536..105634543, + |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.82e-27 | 6 |
neuroblast | 1.82e-27 | 6 |
electrically signaling cell | 1.82e-27 | 6 |
neuronal stem cell | 6.64e-21 | 8 |
epithelial cell of Malassez | 1.83e-14 | 3 |
general ecto-epithelial cell | 2.82e-12 | 14 |
ectodermal cell | 3.07e-09 | 72 |
keratinocyte | 3.49e-09 | 5 |
stratified squamous epithelial cell | 7.25e-08 | 6 |
keratin accumulating cell | 7.25e-08 | 6 |
stratified epithelial cell | 7.25e-08 | 6 |
keratinizing barrier epithelial cell | 7.25e-08 | 6 |
epithelial fate stem cell | 7.25e-08 | 6 |
stratified epithelial stem cell | 7.25e-08 | 6 |
surface ectodermal cell | 7.25e-08 | 6 |
neural cell | 6.43e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 3.42e-11 | 4 |
splanchnocranium | 3.42e-11 | 4 |
primary subdivision of cranial skeletal system | 3.22e-09 | 5 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
protuberance | 6.78e-08 | 6 |
pharyngeal arch | 6.78e-08 | 6 |
embryonic head | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.97e-09 | 5 |