FFCP PHASE1:Hg19::chr15:78110780..78110799,+: Difference between revisions
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|id=chr15:78110780..78110799,+
|short_description=p@chr15:78110780..78110799,+
|description=CAGE_peak_at_chr15:78110780..78110799,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:78110780..78110799,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_at_chr15:78110780..78110799,+ | |||
|id=chr15:78110780..78110799,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.60e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!6.71e-20!10;DOID:3095!6.03e-09!22;DOID:2994!6.03e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:171;4.85e-45;10!DOID:3095;4.27e-21;22!DOID:2994;4.27e-21;22!DOID:169;1.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.85e-45,10;DOID:3095,4.27e-21,22;DOID:2994,4.27e-21,22;DOID:169,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.39e-34!20;UBERON:0002619!3.14e-31!22;UBERON:0000956!1.88e-27!25;UBERON:0000203!1.88e-27!25;UBERON:0001869!8.19e-26!32;UBERON:0001893!3.10e-24!34;UBERON:0002791!1.25e-20!33;UBERON:0002020!5.38e-20!34;UBERON:0003528!5.38e-20!34;UBERON:0002780!6.78e-20!41;UBERON:0001890!6.78e-20!41;UBERON:0006240!6.78e-20!41;UBERON:0003080!2.17e-19!42;UBERON:0002346!1.45e-18!90;UBERON:0001049!1.27e-16!57;UBERON:0005068!1.27e-16!57;UBERON:0006241!1.27e-16!57;UBERON:0007135!1.27e-16!57;UBERON:0002616!5.34e-16!59;UBERON:0001872!3.04e-14!5;UBERON:0000955!3.37e-13!69;UBERON:0006238!3.37e-13!69;UBERON:0003056!6.89e-13!61;UBERON:0000200!6.25e-12!6;UBERON:0000073!7.11e-11!94;UBERON:0001016!7.11e-11!94;UBERON:0000924!7.41e-11!173;UBERON:0006601!7.41e-11!173;UBERON:0001017!7.77e-11!82;UBERON:0003075!2.16e-10!86;UBERON:0007284!2.16e-10!86;UBERON:0005743!3.00e-10!86;UBERON:0001871!2.84e-09!7;UBERON:0003112!5.75e-09!1;UBERON:0000032!5.75e-09!1;UBERON:0005253!5.75e-09!1;UBERON:0003128!5.75e-09!1;UBERON:0002241!5.75e-09!1;UBERON:0001703!5.75e-09!1;UBERON:0004761!5.75e-09!1;UBERON:0009617!5.75e-09!1;UBERON:0002902!6.72e-09!1;UBERON:0009899!6.72e-09!1;UBERON:0007190!7.27e-09!1;UBERON:0002581!9.17e-09!1;UBERON:0002022!1.16e-08!1;UBERON:0000033!6.93e-08!123;UBERON:0000153!2.02e-07!129;UBERON:0007811!2.02e-07!129;UBERON:0007023!2.40e-07!115;UBERON:0002021!5.00e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.11e-50;4!UBERON:0000923;3.11e-50;4!UBERON:0010316;3.11e-50;4!UBERON:0005291;3.11e-50;4!UBERON:0002050;1.81e-40;5!UBERON:0005423;1.81e-40;5!UBERON:0000013;3.60e-11;5!UBERON:0002410;3.60e-11;5!UBERON:0000010;8.85e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.60e-11,5;UBERON:0002410,3.60e-11,5;UBERON:0000010,8.85e-07,8 | |||
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|short_description=p@chr15:78110780..78110799,+ | |||
}} | }} |
Latest revision as of 04:31, 25 July 2015
Short description: | p@chr15:78110780..78110799, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:78110780..78110799, + |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.60e-11 | 5 |
autonomic nervous system | 3.60e-11 | 5 |
peripheral nervous system | 8.85e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.85e-45 | 10 |
germ cell and embryonal cancer | 4.27e-21 | 22 |
germ cell cancer | 4.27e-21 | 22 |
neuroendocrine tumor | 1.57e-09 | 6 |