FFCP PHASE1:Hg19::chr17:18343216..18343225,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=6420 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000411877,uc010vya.1_5end | |||
|cluster_id=chr17:18343216..18343225,+ | |||
|coexpression_cluster_id=C2397 | |||
|description=CAGE_peak_1_at_KRT16P1_5end | |||
|id=chr17:18343216..18343225,+ | |||
|ontology_enrichment_celltype=CL:0002166!3.38e-25!3;CL:0000197!2.95e-13!6;CL:0000098!2.95e-13!6;CL:0002167!2.95e-13!6;CL:0002077!3.21e-09!33;CL:0002541!2.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002166;1.91e-44;3!CL:0000197;3.88e-23;6!CL:0000098;3.88e-23;6!CL:0002167;3.88e-23;6!CL:0002077;2.63e-12;34!CL:0002159;2.08e-10;14!CL:0002537;6.78e-08;5!CL:0000710;1.17e-07;20!CL:0000540;8.72e-07;6!CL:0000404;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.53e-44,3;CL:0000197,3.88e-23,6;CL:0000098,3.88e-23,6;CL:0002167,3.88e-23,6;CL:0002077,3.79e-16,34;CL:0000221,1.28e-11,72;CL:0002159,1.99e-10,14;CL:0002537,6.55e-08,5;CL:0000710,1.17e-07,20;CL:0000540,9.49e-07,6;CL:0000031,9.49e-07,6;CL:0000404,9.49e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;8.72e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!3.57e-19!4;UBERON:0001704!3.57e-19!4;UBERON:0002372!5.62e-19!1;UBERON:0001961!5.62e-19!1;UBERON:0001744!5.62e-19!1;UBERON:0001735!5.62e-19!1;UBERON:0002090!4.01e-13!6;UBERON:0003129!1.42e-07!11;UBERON:0000476!2.97e-07!3;UBERON:0000920!2.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.17e-33;4!UBERON:0008895;1.17e-33;4!UBERON:0011159;3.55e-27;5!UBERON:0011137;5.76e-13;11!UBERON:0010323;5.76e-13;11!UBERON:0000075;3.14e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,9.88e-34,4;UBERON:0008895,9.88e-34,4;UBERON:0011159,3.11e-27,5;UBERON:0010188,6.78e-23,6;UBERON:0002539,6.78e-23,6;UBERON:0008816,6.78e-23,6;UBERON:0010323,5.42e-13,11;UBERON:0011137,1.99e-10,14;UBERON:0000075,3.01e-09,16;UBERON:0008814,2.51e-08,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,1.70130116690864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12527203925513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05650572386389,4.97661808026378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@KRT16P1 | |||
}} |
Latest revision as of 23:10, 18 September 2015
Short description: | p1@KRT16P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT16P1_5end |
Coexpression cluster: | C2397_nasal_immature_Hep2_Mallassezderived_Small_amniotic_acute |
Association with transcript: | 0bp_to_ENST00000411877, uc010vya.1_5end |
EntrezGene: | NA |
HGNC: | 6420 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.53e-44 | 3 |
receptor cell | 3.88e-23 | 6 |
sensory epithelial cell | 3.88e-23 | 6 |
olfactory epithelial cell | 3.88e-23 | 6 |
ecto-epithelial cell | 3.79e-16 | 34 |
ectodermal cell | 1.28e-11 | 72 |
general ecto-epithelial cell | 1.99e-10 | 14 |
amnion mesenchymal stem cell | 6.55e-08 | 5 |
neurecto-epithelial cell | 1.17e-07 | 20 |
neuron | 9.49e-07 | 6 |
neuroblast | 9.49e-07 | 6 |
electrically signaling cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 9.88e-34 | 4 |
splanchnocranium | 9.88e-34 | 4 |
primary subdivision of cranial skeletal system | 3.11e-27 | 5 |
protuberance | 6.78e-23 | 6 |
pharyngeal arch | 6.78e-23 | 6 |
embryonic head | 6.78e-23 | 6 |
cranial skeletal system | 5.42e-13 | 11 |
axial skeletal system | 1.99e-10 | 14 |
subdivision of skeletal system | 3.01e-09 | 16 |
pharyngeal arch system | 2.51e-08 | 18 |