FFCP PHASE1:Hg19::chr18:658204..658225,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:658204..658225,- to FFCP PHASE1:Hg19::chr18:658204..658225,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=494514 | |EntrezGene=494514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29553 | |HGNC=29553 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_AB464497,JF432502_5end | |||
|cluster_id=chr18:658204..658225,- | |||
|description=CAGE_peak_3_at_C18orf56_5end | |||
|id=chr18:658204..658225,- | |||
|ontology_enrichment_celltype=CL:0000066!3.48e-17!254;CL:0000223!6.36e-07!59;CL:0002076!6.38e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000317;3.86e-08;2!CL:1000448;3.86e-08;2!CL:0002308;3.86e-08;2!CL:0000575;3.86e-08;2!CL:0002140;3.86e-08;2!CL:0000622;5.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.91e-12,253;CL:0000575,2.91e-08,2;CL:0000317,5.02e-08,2;CL:1000448,5.02e-08,2;CL:0002308,5.02e-08,2;CL:0002140,5.02e-08,2;CL:0000622,4.30e-07,5;CL:0000150,9.79e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.33e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000063!9.16e-08!97;UBERON:0000064!1.43e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.86e-08;2!UBERON:0007771;3.86e-08;2!UBERON:0003297;3.86e-08;2!UBERON:0001821;3.86e-08;2!UBERON:0003487;3.86e-08;2!UBERON:0001820;3.86e-08;2!UBERON:0002365;1.30e-07;31!UBERON:0002330;1.30e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.40e-08,31;UBERON:0002330,2.40e-08,31;UBERON:0002419,5.02e-08,2;UBERON:0007771,5.02e-08,2;UBERON:0003297,5.02e-08,2;UBERON:0001821,5.02e-08,2;UBERON:0003487,5.02e-08,2;UBERON:0001820,5.02e-08,2;UBERON:0005089,5.02e-08,2;UBERON:0005088,5.02e-08,2;UBERON:0001048,2.73e-07,160 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,1.04474251279935,0,0,0.436882744260345,0,0,0.994192127183747,0,0,0,0,0,0.612002073732759,0.313454721478088,0,0.136874425072884,0.251085279189606,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,0.6024118375565,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0,0.196468613246569,1.82147644146271,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.825354125820202,0,0,0,0,0.805658634218294,0,0.732186172644509,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,3.05265836499774,0,0.379891534993739,0.132409180813219,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0.311211035399766,0,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0.597794722207204,0,0.323745888736263,0,0,0.122834317311768,0.516628905878827,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.412210116953756,0,0.18611685633159,0,0,0.252433774244115,0.368199594569197,0.323292113637624,0,0.10075209822764,0,0.386521706326594,0.545492241181669,0,1.46368447355514,0.530119073285941,0.929551542956147,0.932949495138334,1.51392510525377,1.09493207722749,0,0,0,0.928735856063958,0,0.473227200159376,0.168584690078102,1.20505514941741,0.55146986366197,0.871517776369625,1.66089433377768,1.48314438976181,0.98110732562673,0.769494313892781,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,0.219500570817251,0,0.301586917234893,0.462942225792648,0.325808305310325,0,0,0.811512834825538,0.469634776943287,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0.567100388969546,1.70161193135412,0.871901815541886,2.30029607499127,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0.102827492703324,1.20137223137567,2.00078502841405,0,0,0.07333828582095,0.129271715757778,3.57656445851882,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0.519254429183621,0.116210378459959,0.241718899183244,0.802025881213139,0.552485933615378,0.229628896329213,0.546273504020151,0.655622074797121,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,1.00337954770971,1.01950509218015,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0.328014645699706,0.325378394664303,0,0.183138929636687,0.082509499920588,1.14853107599234,1.30012049207304,0,0,0.154048617114644,0.460511024178389,0,0.429680979473094,0.870100163485371,0.340906509664404,0,0.330569830721956,1.15314040419064,0.638063562472921,1.2138933702666,0.464845549297286,0,0,0,0.532306030317022,0.869932992075073,0.37064843820784,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0.235624804691373,0.202182481573316,1.58510321173008,0,0,0,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0.7133421029625,0,0,0.658589785919804,0.379473173765715,0,0.577332676353072,0,2.17781969722645,0,0.86101074534246,3.36942951335251,1.33029046061003,0.689170200620878,0,0,0,0,0,0,0,0,0.534120355637366,1.92495971052672,1.47024129588619,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0,0.313359791546046,0,0.169291777801603,0,0.605399121573143,0.425846237690326,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0.935702702041099,0,0,0.891547074219827,0.284136146806413,0,0,0,0,0.140669416410513,0,0.494411622680279,0.422250816255987,0,0,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.74214478529481,0,1.30213880542617,0,0,0.1137934482855,1.01701460117107,0.945550727071745,0.344743373241465,0,0.347249989866585,0.885741385813839,0.361789315876224,0,0.110579259931225,0.886642856860642,0,2.61452312445576,1.25481369850743,0,0.455768223388005,0,1.16684937732704,0,0,0.0915975934018623,0,0,0,0,0.451191321234361,0.588187602953219,0.335643173951685,0,0,0.210998064528027,0,0.706765357169704,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,0.988511511572023,0.417687798021821,0.606610196826093,0,0.702793337176017,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0.311064574191741,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.694238953340524,0.685946781900644,0.870592065804026,0,0.171986032471617,0.290268993867255,0.365446585430928,0.0821154570532092,0.2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| ||
|short_description=p3@C18orf56 | |||
}} | }} |
Latest revision as of 05:56, 20 September 2015
Short description: | p3@C18orf56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C18orf56_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_AB464497, JF432502_5end |
EntrezGene: | C18orf56 |
HGNC: | 29553 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.91e-12 | 253 |
corneal epithelial cell | 2.91e-08 | 2 |
sebum secreting cell | 5.02e-08 | 2 |
epithelial cell of sweat gland | 5.02e-08 | 2 |
epithelial cell of skin gland | 5.02e-08 | 2 |
acinar cell of sebaceous gland | 5.02e-08 | 2 |
acinar cell | 4.30e-07 | 5 |
glandular epithelial cell | 9.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.40e-08 | 31 |
exocrine system | 2.40e-08 | 31 |
skin gland | 5.02e-08 | 2 |
epidermis gland | 5.02e-08 | 2 |
gland of integumental system | 5.02e-08 | 2 |
sebaceous gland | 5.02e-08 | 2 |
skin sebaceous gland | 5.02e-08 | 2 |
sweat gland | 5.02e-08 | 2 |
sweat gland placode | 5.02e-08 | 2 |
sebaceous gland placode | 5.02e-08 | 2 |
primordium | 2.73e-07 | 160 |