FFCP PHASE1:Hg19::chr18:8705221..8705255,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:8705221..8705255,+ | |||
|description=CAGE_peak_at_chr18:8705221..8705255,+ | |||
|id=chr18:8705221..8705255,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.18e-12!25;CL:0000133!4.86e-12!59;CL:0000221!4.31e-10!71;CL:0000095!5.23e-09!17;CL:0000123!5.23e-09!17;CL:0000333!2.65e-08!41;CL:0000243!6.29e-08!15;CL:0000125!6.29e-08!15;CL:0000030!6.29e-08!15;CL:0000339!6.29e-08!15;CL:0000057!2.33e-07!75;CL:0000055!4.25e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.72e-09;3!CL:1000428;5.72e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,2.96e-09,41;CL:0000346,3.12e-09,3;CL:1000428,3.12e-09,3;CL:0000133,1.30e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.64e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-15!94;UBERON:0001016!3.76e-15!94;UBERON:0005743!6.03e-14!86;UBERON:0004121!7.19e-14!169;UBERON:0001017!1.09e-13!82;UBERON:0000924!6.19e-13!173;UBERON:0006601!6.19e-13!173;UBERON:0000955!4.54e-10!69;UBERON:0006238!4.54e-10!69;UBERON:0000475!8.69e-10!365;UBERON:0000033!1.42e-08!123;UBERON:0000153!1.97e-08!129;UBERON:0007811!1.97e-08!129;UBERON:0001049!2.39e-08!57;UBERON:0005068!2.39e-08!57;UBERON:0006241!2.39e-08!57;UBERON:0007135!2.39e-08!57;UBERON:0000468!4.54e-08!659;UBERON:0002616!9.85e-08!59;UBERON:0000480!1.76e-07!626;UBERON:0000467!2.02e-07!625;UBERON:0003075!2.18e-07!86;UBERON:0007284!2.18e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.72e-09;3!UBERON:0001992;5.72e-09;3!UBERON:0002037;2.36e-08;6!UBERON:0004732;1.79e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.12e-09,3;UBERON:0001992,3.12e-09,3;UBERON:0002037,2.14e-08,6;UBERON:0006215,2.14e-08,6;UBERON:0004732,1.90e-07,13 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,1.05506791291381,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0,0.984968464614303,1.42800483870977,0.940364164434263,1.43117993565528,0.821246550437305,1.50651167513763,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0.46480320348181,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.189069634328136,0.221729397462564,0.87834785693126,0.261958150995425,0,0.370784442784429,0,0.348259474598534,0.26591592103773,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,3.87780264148325,0,0,0.506522046658319,0.662045904066094,0.573673241497627,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0.134710672069688,0.817309515567294,0.454072282934794,0.576175924479999,1.40592859100278,0,0,0.298897361103602,0.352303495931295,0.323745888736263,0.421352420106746,0,0.368502951935304,0.516628905878827,0,0.741800787835671,0,0.718618141816238,1.0100166837244,0.375355559615893,0,0.877955241761676,0.30648779579902,0.150238058906597,0,2.15267562826634,0.427114777637135,0.423863802319124,0.300091096084402,1.03052529238439,1.28820270022815,0.558350568994769,0.337552664482532,0.292311015483596,2.27190396819703,0.828449087780694,0.969876340912871,2.13005755509969,0.302256294682921,0.339121184620975,0,0.545492241181669,0,0.731842236777572,0.927708378250397,1.74290914304278,1.34759371519982,1.00928340350251,1.45990943630332,1.56449532329816,2.57296375277154,1.38134921352481,0,0.721879481669586,0.591534000199219,0.505754070234305,0.482022059766964,0.220587945464788,0.435758888184812,0.949082476444386,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.8231480226628,1.47008711385542,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,2.07986957055916,2.88662684050547,0.695582429850461,0.469634776943287,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0.44024217006613,1.65862492432618,1.15295962733569,2.5248486685276,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0.387815147273333,0,0,1.06375246633948,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0.448340575974109,0,0,0.256686072559497,0.76228387266739,1.30139853857622,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.819989904948992,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0,0.306923946576125,0,0.256278298511402,0.511707249066704,0.482561763430822,1.48418066444991,0.308419387605311,0.532685175939381,0.328508624055237,0,0.116210378459959,0.120859449591622,0.200506470303285,0.276242966807689,0,0.364182336013434,0.786746489756545,0,0.539107359730903,3.13739907670742,2.92278449306521,0.527758144464379,1.13733384070897,0,0.647747748306418,0,1.62567862526312,0,0.254876273045038,0.831076008928724,0.671624264166535,0.219259876645935,0.261435451024901,0.512900250232778,0,0.325378394664303,0,0.0915694648183434,0.165018999841176,0.574265537996172,0.650060246036521,0,0.290012154876366,0.154048617114644,0.307007349452259,0,0,0.290033387828457,0.511359764496605,0.0890320356467374,0,0.192190067365106,1.14851441245126,0.30347334256665,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0.632758849437452,0,0,0.855877976067841,0.318203247925937,0,0.359744915166629,0.823611089208164,0.471249609382746,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,1.65409603063837,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,1.33029046061003,0,0,0,1.13929437434833,0.476463550915578,0,0,0.540031437238115,0,0.106824071127473,0,0,0.185803175125719,0.577076851905779,0.284567373393656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.540911356951966,0,0,0,0.293016358543788,0.121360521749513,0,0.568272293612826,0,1.48482340416319,0,0,0.140669416410513,0.222617410045812,0,0,0.19924798825107,0,0,1.94310496754094,0,0.622079175323615,0,0,0,0.197286811273867,0,0,0.969332746095218,0.371072392647405,0,0.260427761085233,0.262379999988587,0.724999575434793,0.1137934482855,0,1.41832609060762,0,0.291604613383254,0.173624994933292,0,0.482385754501632,10.6807215421958,10.9473467331912,7.68423809279223,0.6581561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| |||
|short_description=p@chr18:8705221..8705255,+ | |||
}} |
Latest revision as of 20:40, 24 September 2015
Short description: | p@chr18:8705221..8705255, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:8705221..8705255, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 2.96e-09 | 41 |
hair follicle dermal papilla cell | 3.12e-09 | 3 |
stem cell of epidermis | 3.12e-09 | 3 |
neurectodermal cell | 1.30e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.12e-09 | 3 |
papillary layer of dermis | 3.12e-09 | 3 |
cerebellum | 2.14e-08 | 6 |
rhombic lip | 2.14e-08 | 6 |
segmental subdivision of nervous system | 1.90e-07 | 13 |