FFCP PHASE1:Hg19::chr19:42893148..42893167,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C60|description=CAGE_peak_at_chr19:42893148..42893167,-|id=chr19:42893148..42893167,-|ontology_enrichment_celltype=CL:0002623!5.54e-08!3|ontology_enrichment_celltype_v019=CL:0002623;1.03e-17;3!CL:0000622;3.42e-11;5!CL:0000154;1.50e-09;6!CL:0000150;8.61e-07;9|ontology_enrichment_celltype_v019_2=CL:0002623,1.12e-17,3;CL:0000622,3.60e-11,5;CL:0000154,1.57e-09,6;CL:0000150,8.85e-07,9|ontology_enrichment_development_v019=UBERON:0009143;1.88e-50;1!UBERON:0008814;8.10e-26;2!UBERON:0010056;8.10e-26;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001723!1.82e-27!3;UBERON:0001033!1.82e-27!3;UBERON:0010056!1.82e-27!3;UBERON:0002372!3.45e-21!1;UBERON:0001961!3.45e-21!1;UBERON:0001744!3.45e-21!1;UBERON:0001735!3.45e-21!1;UBERON:0001042!1.44e-18!10;UBERON:0009145!1.44e-18!10;UBERON:0000078!4.45e-18!18;UBERON:0006562!6.02e-17!11;UBERON:0000166!1.47e-15!21;UBERON:0000165!9.06e-12!28;UBERON:0000930!9.06e-12!28;UBERON:0000341!2.02e-11!2;UBERON:0003127!3.70e-11!2;UBERON:0001557!4.30e-10!19;UBERON:0000161!1.74e-09!35;UBERON:0007023!3.17e-08!115;UBERON:0000072!2.94e-07!46;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129;UBERON:0001041!3.13e-07!98;UBERON:0001004!5.19e-07!72;UBERON:0001444!5.38e-07!48|ontology_enrichment_uberon_v019=UBERON:0000341;4.90e-26;2!UBERON:0001043;7.35e-18;3!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0001041;3.41e-15;14!UBERON:0000974;1.27e-09;6!UBERON:0001044;1.50e-09;6!UBERON:0003293;1.50e-09;6!UBERON:0003294;1.50e-09;6!UBERON:0010047;1.50e-09;6!UBERON:0003408;1.50e-09;6!UBERON:0000167;1.50e-09;6!UBERON:0001555;3.93e-08;54!UBERON:0000165;4.21e-08;28|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.56e-26,2;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0001723,9.46e-18,3;UBERON:0001033,9.46e-18,3;UBERON:0010056,9.46e-18,3;UBERON:0000166,4.96e-10,22;UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6;UBERON:0000153,4.61e-08,62;UBERON:0007811,4.61e-08,62;UBERON:0000165,7.40e-08,29;UBERON:0000930,7.40e-08,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0,0,0,0,0,0,2.61260097476354,0.342233301085281,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:42893148..42893167,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr19:42893148..42893167,- | |||
|id=chr19:42893148..42893167,- | |||
|ontology_enrichment_celltype=CL:0002623!5.54e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002623;1.03e-17;3!CL:0000622;3.42e-11;5!CL:0000154;1.50e-09;6!CL:0000150;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,1.12e-17,3;CL:0000622,3.60e-11,5;CL:0000154,1.57e-09,6;CL:0000150,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.88e-50;1!UBERON:0008814;8.10e-26;2!UBERON:0010056;8.10e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!1.82e-27!3;UBERON:0001033!1.82e-27!3;UBERON:0010056!1.82e-27!3;UBERON:0002372!3.45e-21!1;UBERON:0001961!3.45e-21!1;UBERON:0001744!3.45e-21!1;UBERON:0001735!3.45e-21!1;UBERON:0001042!1.44e-18!10;UBERON:0009145!1.44e-18!10;UBERON:0000078!4.45e-18!18;UBERON:0006562!6.02e-17!11;UBERON:0000166!1.47e-15!21;UBERON:0000165!9.06e-12!28;UBERON:0000930!9.06e-12!28;UBERON:0000341!2.02e-11!2;UBERON:0003127!3.70e-11!2;UBERON:0001557!4.30e-10!19;UBERON:0000161!1.74e-09!35;UBERON:0007023!3.17e-08!115;UBERON:0000072!2.94e-07!46;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129;UBERON:0001041!3.13e-07!98;UBERON:0001004!5.19e-07!72;UBERON:0001444!5.38e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.90e-26;2!UBERON:0001043;7.35e-18;3!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0001041;3.41e-15;14!UBERON:0000974;1.27e-09;6!UBERON:0001044;1.50e-09;6!UBERON:0003293;1.50e-09;6!UBERON:0003294;1.50e-09;6!UBERON:0010047;1.50e-09;6!UBERON:0003408;1.50e-09;6!UBERON:0000167;1.50e-09;6!UBERON:0001555;3.93e-08;54!UBERON:0000165;4.21e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.56e-26,2;UBERON:0001043,6.76e-18,3;UBERON:0009143,6.76e-18,3;UBERON:0001723,9.46e-18,3;UBERON:0001033,9.46e-18,3;UBERON:0010056,9.46e-18,3;UBERON:0000166,4.96e-10,22;UBERON:0001044,1.57e-09,6;UBERON:0003293,1.57e-09,6;UBERON:0003294,1.57e-09,6;UBERON:0010047,1.57e-09,6;UBERON:0000167,1.57e-09,6;UBERON:0000153,4.61e-08,62;UBERON:0007811,4.61e-08,62;UBERON:0000165,7.40e-08,29;UBERON:0000930,7.40e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07377898544228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0,0,0,0,0,0,2.61260097476354,0.342233301085281,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:42893148..42893167,- | |||
}} |
Revision as of 20:57, 11 September 2013
Short description: | p@chr19:42893148..42893167, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:42893148..42893167, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 1.12e-17 | 3 |
acinar cell | 3.60e-11 | 5 |
protein secreting cell | 1.57e-09 | 6 |
glandular epithelial cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
throat | 5.56e-26 | 2 |
esophagus | 6.76e-18 | 3 |
esophageal region | 6.76e-18 | 3 |
tongue | 9.46e-18 | 3 |
gustatory system | 9.46e-18 | 3 |
future tongue | 9.46e-18 | 3 |
oral opening | 4.96e-10 | 22 |
saliva-secreting gland | 1.57e-09 | 6 |
gland of oral region | 1.57e-09 | 6 |
gland of foregut | 1.57e-09 | 6 |
oral gland | 1.57e-09 | 6 |
oral cavity | 1.57e-09 | 6 |
anterior region of body | 4.61e-08 | 62 |
craniocervical region | 4.61e-08 | 62 |
mouth | 7.40e-08 | 29 |
stomodeum | 7.40e-08 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.