FFCP PHASE1:Hg19::chr19:49547099..49547106,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93659 | |EntrezGene=93659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16452 | |HGNC=16452 | ||
|TSSclassifier=strong | |||
|UniProt=P01233 | |UniProt=P01233 | ||
|association_with_transcript=0bp_to_NM_033043,uc002ply.2_5end | |association_with_transcript=0bp_to_NM_033043,uc002ply.2_5end | ||
|cluster_id=chr19:49547099..49547106,+ | |||
|coexpression_cluster_id=C684 | |||
|description=CAGE_peak_1_at_CGB5_5end | |description=CAGE_peak_1_at_CGB5_5end | ||
|id=chr19:49547099..49547106,+ | |id=chr19:49547099..49547106,+ | ||
|ontology_enrichment_celltype=CL:0002620!9.88e-12!23;CL:0000039!3.51e-11!7;CL:0000586!3.51e-11!7 | |ontology_enrichment_celltype=CL:0002620!9.88e-12!23;CL:0000039!3.51e-11!7;CL:0000586!3.51e-11!7 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.41e-22;23!CL:0000039;4.58e-11;7!CL:0000586;4.58e-11;7!CL:0000346;6.14e-07;3!CL:1000428;6.14e-07;3!CL:0002603;8.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.81e-22,23;CL:0000039,3.98e-11,7;CL:0000586,3.98e-11,7;CL:0002603,6.33e-07,3;CL:0000346,6.52e-07,3;CL:1000428,6.52e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.19e-07!5;DOID:450!1.19e-07!5;DOID:66!1.19e-07!5;DOID:423!1.19e-07!5;DOID:0080000!1.19e-07!5;DOID:11722!1.19e-07!5 | |ontology_enrichment_disease=DOID:17!1.19e-07!5;DOID:450!1.19e-07!5;DOID:66!1.19e-07!5;DOID:423!1.19e-07!5;DOID:0080000!1.19e-07!5;DOID:11722!1.19e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.37e-15;5!DOID:450;4.37e-15;5!DOID:66;4.37e-15;5!DOID:423;4.37e-15;5!DOID:0080000;4.37e-15;5!DOID:11722;4.37e-15;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.43e-15,5;DOID:450,6.43e-15,5;DOID:66,6.43e-15,5;DOID:423,6.43e-15,5;DOID:0080000,6.43e-15,5;DOID:11722,6.43e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.00e-09!40;UBERON:0002199!1.14e-08!45;UBERON:0002416!1.14e-08!45;UBERON:0000488!3.98e-08!4;UBERON:0007625!4.47e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;9.68e-14;41!UBERON:0002199;3.27e-09;46!UBERON:0002416;3.27e-09;46!UBERON:0003102;1.99e-08;50!UBERON:0000412;6.14e-07;3!UBERON:0001992;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.33e-16,41;UBERON:0002199,2.83e-14,46;UBERON:0002416,2.83e-14,46;UBERON:0000412,6.52e-07,3;UBERON:0001992,6.52e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,1.47745269692145,1.83600622119828,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,1.5905718941022,0,0.189069634328136,1.10864698731282,0.527008714158756,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,78.3932707960327,1.2813443329114,0,26.7081075515118,1.13357782162283,22.6723675240154,15.8199327881851,3.03797398034279,2.33848812386877,13.3789900349381,0,0,108.987944902601,41.7113686662431,0.169560592310488,0,0,0,0,0,0.232387885739037,0.207322110030741,0,0,3.12899064659632,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0,0,0,0,0,0,0,0.784349769176855,1.46139224653261,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0.984043937099117,0,29.675811354544,1.83138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0088922641049,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0.755798243562828,0,0,0,10.2449920307953,0,0,0,0,0,0,0,0,0,0,0,0,16.272233618737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.5148490046269,46.494459804262,27.161842980502,1.5950057986596,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0.794858446811959,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0.407712618220842,1.15063130943567,0,0.866851769704557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,5.79319274070434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0,0.336749488765919,0,0,0,0,1.81364740409818,0.463044948647668,0,194.311392573414,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,7.62764190934334,0,0,0,737.635436248773,0,12.3096146406269,0,141.202562337278,0.0675375846183947,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,1.21393120847326,0,179.711001949506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,3.82215575590973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,1.18948980281472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,1.60330443159336,0.18378979906969,0,0,0,0,0,0,0,0.129177819672012,0.496597714366863,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@CGB5 | |short_description=p1@CGB5 | ||
}} | }} |
Latest revision as of 06:02, 19 September 2015
Short description: | p1@CGB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CGB5_5end |
Coexpression cluster: | C684_pagetoid_mesothelioma_placenta_bone_papillotubular_Hair_Fibroblast |
Association with transcript: | 0bp_to_NM_033043, uc002ply.2_5end |
EntrezGene: | CGB5 |
HGNC: | 16452 |
UniProt: | P01233 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.81e-22 | 23 |
germ line cell | 3.98e-11 | 7 |
germ cell | 3.98e-11 | 7 |
astrocyte of the cerebellum | 6.33e-07 | 3 |
hair follicle dermal papilla cell | 6.52e-07 | 3 |
stem cell of epidermis | 6.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.33e-16 | 41 |
integument | 2.83e-14 | 46 |
integumental system | 2.83e-14 | 46 |
dermal papilla | 6.52e-07 | 3 |
papillary layer of dermis | 6.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.43e-15 | 5 |
myotonic disease | 6.43e-15 | 5 |
muscle tissue disease | 6.43e-15 | 5 |
myopathy | 6.43e-15 | 5 |
muscular disease | 6.43e-15 | 5 |
myotonic dystrophy | 6.43e-15 | 5 |