FFCP PHASE1:Hg19::chr1:154946187..154946200,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:154946187..154946200,-
|short_description=p@chr1:154946187..154946200,-
|description=CAGE_peak_at_chr1:154946187..154946200,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:154946187..154946200,- | |||
|description=CAGE_peak_at_chr1:154946187..154946200,- | |||
|id=chr1:154946187..154946200,- | |||
|ontology_enrichment_celltype=CL:0000066!1.12e-18!254;CL:0002321!2.58e-10!248;CL:0000220!8.62e-10!246 | |||
|ontology_enrichment_celltype_v019=CL:0002202;4.93e-10;9!CL:0002632;4.93e-10;9!CL:0002328;2.50e-08;3!CL:0000346;2.50e-08;3!CL:1000428;2.50e-08;3!CL:0000307;2.50e-08;3!CL:0000136;2.09e-07;13!CL:0002368;5.65e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.39e-10,9;CL:0002632,4.39e-10,9;CL:0002328,1.33e-08,3;CL:0000346,1.86e-08,3;CL:1000428,1.86e-08,3;CL:0000068,3.90e-08,3;CL:0000069,3.90e-08,3;CL:0000307,3.90e-08,3;CL:0000377,3.90e-08,3;CL:0002368,5.23e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;2.50e-08;3 | |||
|ontology_enrichment_disease=DOID:305!8.17e-15!106;DOID:0050687!2.26e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.69e-09!169;UBERON:0000925!2.69e-09!169;UBERON:0006595!2.69e-09!169;UBERON:0001007!1.09e-08!155;UBERON:0001555!1.09e-08!155;UBERON:0007026!1.09e-08!155;UBERON:0003104!1.44e-08!238;UBERON:0009142!1.44e-08!238;UBERON:0000077!2.42e-08!130;UBERON:0004921!2.97e-08!129;UBERON:0004185!2.97e-08!129;UBERON:0008947!1.66e-07!38;UBERON:0003258!1.66e-07!38;UBERON:0002100!4.53e-07!216;UBERON:0000065!5.53e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.50e-08;3!UBERON:0000412;2.50e-08;3!UBERON:0002031;2.50e-08;3!UBERON:0001992;2.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.33e-08,3;UBERON:0002031,1.33e-08,3;UBERON:0000412,1.86e-08,3;UBERON:0001992,1.86e-08,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,2.09340350391728,0,0,0,0,0,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0,0,0,0.393364276848904,0,0,1.83884244895785,1.50602959389125,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.378139268656271,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0.993812036833525,0,0.347140501607594,0.56530794192401,0.838998872419812,1.10047216776027,0.417989933073621,0.775250277507987,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,3.06633274931766,0,0.366403487860815,0,0,0,0,0,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0.404132016209064,0.163461903113459,0,1.15235184896,0,0,0,0,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0,0,0.718618141816238,0,0.125118519871964,0.554128230968366,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0.427114777637135,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0,0.276149695926898,0,0.355009592516614,0.10075209822764,0.67824236924195,0.193260853163297,0.272746120590835,0,0.731842236777572,0.265059536642971,0.464775771478074,0.414644220061482,0.252320850875628,0.36497735907583,1.56449532329816,0,1.38134921352481,0,0,0.709840800239063,0.842923450390509,0.241011029883482,0.992645754591546,0.435758888184812,0.949082476444386,0.674156540800822,0.784885860501384,0.38474715694639,0,0,0.4115740113314,0,2.53510069643662,1.96565443335525,0.590789906681404,0,0.245976877086227,0.171567810298526,0.329250856225877,0,0.201057944823262,0.185176890317059,0,0,0,0,0,0.577465791044295,0.462985512576611,1.14152491340759,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0,0.492663237895943,0,0.621984346622316,1.00883967391873,1.51490920111656,0.126995788584338,0,0,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0.43596006883328,0.22001485746285,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0.368738337083406,0.347534457872331,0.391602314925481,0,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.483437798366489,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.655622074797121,0.451199612907412,0.231046011313244,0.784349769176855,1.46139224653261,0,1.13733384070897,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.824328093181778,0.27470839445503,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0.495854746082934,0,0.382838137483752,0.2023155617111,0,0,1.3940745403212,0,0,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,2.35484592059769,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0,1.239293992399,0.845086807596724,0,0,0.7133421029625,0.354761064070598,0,0,0.379473173765715,0.699869440489966,0.288666338176536,1.34060455107157,1.08890984861323,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.568272293612826,0.95497793895076,0.593929361665277,0.921482106297696,0,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0,0.251932747854276,0,0,0,0.0898683511473268,1.25314822272926,0,0,0,0,0.969332746095218,0,0,0,0.174919999992391,0,0.227586896570999,0.508507300585533,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0.225595660617181,0,0,0,0,0.210998064528027,1.46909527343233,0.706765357169704,0,0.995261931078505,0.176915129006678,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0.485560759068186,0.394584402849391,0,0,0,0.450970258243478,0,0,0.661983911750998,0.941798755221676,0,1.42304773014896,0,0.520679215005393,0,0.435296032902013,0,0,1.45134496933628,0.950161122120412,1.31384731285135,0.0969890164884194,0,0,0,0,0,0.977756913674015,0.240476460754601,0.426905989478705,0,0.288180834308212,0,0.171594997861965,0.576219191952599,0.124252535565433,0.707082103850386,0.271808412147228,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.236349546921671,0.576911008668165,0.674035438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| ||
|short_description=p@chr1:154946187..154946200,- | |||
}} | }} |
Latest revision as of 22:08, 27 July 2015
Short description: | p@chr1:154946187..154946200, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:154946187..154946200, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.39e-10 | 9 |
epithelial cell of lower respiratory tract | 4.39e-10 | 9 |
bronchial epithelial cell | 1.33e-08 | 3 |
hair follicle dermal papilla cell | 1.86e-08 | 3 |
stem cell of epidermis | 1.86e-08 | 3 |
duct epithelial cell | 3.90e-08 | 3 |
branched duct epithelial cell | 3.90e-08 | 3 |
tracheal epithelial cell | 3.90e-08 | 3 |
tracheoblast | 3.90e-08 | 3 |
respiratory epithelial cell | 5.23e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.33e-08 | 3 |
epithelium of bronchus | 1.33e-08 | 3 |
dermal papilla | 1.86e-08 | 3 |
papillary layer of dermis | 1.86e-08 | 3 |